RNA–Protein interactions for RNA: ENST00000416380.6

YIPF3-203, Transcript of Yip1 domain family member 3, humanhuman

TSL 5

Gene YIPF3, Length 1,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-203ENST00000416380 TTLL5Q6EMB2 1281 aa15.69■□□□□ 0.1
YIPF3-203ENST00000416380 ERC1Q8IUD2 1116 aa15.69■□□□□ 0.1
YIPF3-203ENST00000416380 SMC5Q8IY18 1101 aa15.69■□□□□ 0.1
YIPF3-203ENST00000416380 AGBL3Q8NEM8 1001 aa15.69■□□□□ 0.1
YIPF3-203ENST00000416380 ZBED3Q96IU2 234 aaPredicted RBP15.69■□□□□ 0.1
YIPF3-203ENST00000416380 ZNF512BQ96KM6 892 aaPredicted RBP15.69■□□□□ 0.1
YIPF3-203ENST00000416380 GPBP1L1Q9HC44 474 aaPredicted RBP15.69■□□□□ 0.1
YIPF3-203ENST00000416380 IL1RAPL2Q9NP60 686 aa15.69■□□□□ 0.1
YIPF3-203ENST00000416380 JAG2Q9Y219 1238 aa15.69■□□□□ 0.1
YIPF3-203ENST00000416380 PDS5AQ29RF7 1337 aaKnown RBP15.68■□□□□ 0.1
YIPF3-203ENST00000416380 SALL3Q9BXA9 1300 aa15.68■□□□□ 0.1
YIPF3-203ENST00000416380 SCN4AP35499 1836 aa15.68■□□□□ 0.1
YIPF3-203ENST00000416380 SMARCA5O60264 1052 aaPredicted RBP15.68■□□□□ 0.1
YIPF3-203ENST00000416380 VEGFAP15692 232 aaPredicted RBP15.68■□□□□ 0.1
YIPF3-203ENST00000416380 HSP90AB4PQ58FF6 505 aa15.68■□□□□ 0.1
YIPF3-203ENST00000416380 TRPM4Q8TD43 1214 aa15.68■□□□□ 0.1
YIPF3-203ENST00000416380 KIF1BPQ96EK5 621 aa15.68■□□□□ 0.1
YIPF3-203ENST00000416380 CCDC8Q9H0W5 538 aaPredicted RBP15.68■□□□□ 0.1
YIPF3-203ENST00000416380 MCAMP43121 646 aa15.67■□□□□ 0.1
YIPF3-203ENST00000416380 CAVIN4Q5BKX8 364 aa15.67■□□□□ 0.1
YIPF3-203ENST00000416380 PI16Q6UXB8 463 aa15.67■□□□□ 0.1
YIPF3-203ENST00000416380 ZNF384Q8TF68 577 aa15.67■□□□□ 0.1
YIPF3-203ENST00000416380 HMG20BQ9P0W2 317 aa15.67■□□□□ 0.1
YIPF3-203ENST00000416380 PGAP2Q9UHJ9 254 aa15.67■□□□□ 0.1
YIPF3-203ENST00000416380 CNOT7Q9UIV1 285 aaKnown RBP15.67■□□□□ 0.1
YIPF3-203ENST00000416380 HACL1Q9UJ83 578 aa15.67■□□□□ 0.1
YIPF3-203ENST00000416380 AOX1Q06278 1338 aa15.67■□□□□ 0.1
YIPF3-203ENST00000416380 SALL1Q9NSC2 1324 aa15.67■□□□□ 0.1
YIPF3-203ENST00000416380 SEMA3EO15041 775 aa15.66■□□□□ 0.1
YIPF3-203ENST00000416380 EPHX2P34913 555 aa15.66■□□□□ 0.1
YIPF3-203ENST00000416380 OS9Q13438 667 aaPredicted RBP15.66■□□□□ 0.1
YIPF3-203ENST00000416380 MICALL2Q8IY33 904 aa15.66■□□□□ 0.1
YIPF3-203ENST00000416380 NEUROD6Q96NK8 337 aa15.66■□□□□ 0.1
YIPF3-203ENST00000416380 PCDHAC2Q9Y5I4 1007 aa15.66■□□□□ 0.1
YIPF3-203ENST00000416380 SAMD7Q7Z3H4 446 aa15.65■□□□□ 0.1
YIPF3-203ENST00000416380 LRRCC1Q9C099 1032 aa15.65■□□□□ 0.1
YIPF3-203ENST00000416380 ADARB2Q9NS39 739 aaKnown RBP15.65■□□□□ 0.1
YIPF3-203ENST00000416380 MYO3BQ8WXR4 1341 aa15.65■□□□□ 0.1
YIPF3-203ENST00000416380 IQCA1LA6NCM1 817 aa15.64■□□□□ 0.09
YIPF3-203ENST00000416380 G3V3G9 751 aa15.64■□□□□ 0.09
YIPF3-203ENST00000416380 APBB1O00213 710 aa15.64■□□□□ 0.09
YIPF3-203ENST00000416380 USP17L8P0C7I0 530 aa15.64■□□□□ 0.09
YIPF3-203ENST00000416380 MFSD14BQ5SR56 506 aa15.64■□□□□ 0.09
YIPF3-203ENST00000416380 DCAF8Q5TAQ9 597 aa15.64■□□□□ 0.09
YIPF3-203ENST00000416380 AACSQ86V21 672 aa15.64■□□□□ 0.09
YIPF3-203ENST00000416380 C16orf71Q8IYS4 520 aaPredicted RBP15.64■□□□□ 0.09
YIPF3-203ENST00000416380 MTMR14Q8NCE2 650 aa15.64■□□□□ 0.09
YIPF3-203ENST00000416380 OTUD7AQ8TE49 926 aaPredicted RBP15.64■□□□□ 0.09
YIPF3-203ENST00000416380 AKAP11Q9UKA4 1901 aa15.64■□□□□ 0.09
YIPF3-203ENST00000416380 ASTN2O75129 1339 aaPredicted RBP15.64■□□□□ 0.09
YIPF3-203ENST00000416380 USP50Q70EL3 339 aaPredicted RBP15.63■□□□□ 0.09
YIPF3-203ENST00000416380 KIAA0825Q8IV33 1275 aa15.63■□□□□ 0.09
YIPF3-203ENST00000416380 DENND2AQ9ULE3 1009 aa15.63■□□□□ 0.09
YIPF3-203ENST00000416380 CYP2E1P05181 493 aaPredicted RBP15.62■□□□□ 0.09
YIPF3-203ENST00000416380 PRDX5P30044 214 aa15.62■□□□□ 0.09
YIPF3-203ENST00000416380 CHAF1AQ13111 956 aaPredicted RBP15.62■□□□□ 0.09
YIPF3-203ENST00000416380 VPS37DQ86XT2 251 aa15.62■□□□□ 0.09
YIPF3-203ENST00000416380 SPATA5Q8NB90 893 aa15.62■□□□□ 0.09
YIPF3-203ENST00000416380 GCC1Q96CN9 775 aa15.62■□□□□ 0.09
YIPF3-203ENST00000416380 MRIQ9BWK5 157 aa15.62■□□□□ 0.09
YIPF3-203ENST00000416380 MYOZ2Q9NPC6 264 aa15.62■□□□□ 0.09
YIPF3-203ENST00000416380 TOMM70O94826 608 aa15.61■□□□□ 0.09
YIPF3-203ENST00000416380 ITGBL1O95965 494 aaPredicted RBP15.61■□□□□ 0.09
YIPF3-203ENST00000416380 MMP14P50281 582 aa15.61■□□□□ 0.09
YIPF3-203ENST00000416380 TBC1D10BQ4KMP7 808 aaPredicted RBP15.61■□□□□ 0.09
YIPF3-203ENST00000416380 CLASRPQ8N2M8 674 aaKnown RBP15.61■□□□□ 0.09
YIPF3-203ENST00000416380 RBM46Q8TBY0 533 aaKnown RBP15.61■□□□□ 0.09
YIPF3-203ENST00000416380 WDR66Q8TBY9 1149 aa15.61■□□□□ 0.09
YIPF3-203ENST00000416380 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.61■□□□□ 0.09
YIPF3-203ENST00000416380 TBC1D22AQ8WUA7 517 aa15.61■□□□□ 0.09
YIPF3-203ENST00000416380 SUGT1Q9Y2Z0 365 aa15.61■□□□□ 0.09
YIPF3-203ENST00000416380 NDUFB9Q9Y6M9 179 aa15.61■□□□□ 0.09
YIPF3-203ENST00000416380 CEP350Q5VT06 3117 aa15.61■□□□□ 0.09
YIPF3-203ENST00000416380 WNT10BO00744 389 aa15.6■□□□□ 0.09
YIPF3-203ENST00000416380 UQCRFS1P1P0C7P4 283 aa15.6■□□□□ 0.09
YIPF3-203ENST00000416380 ZAP70P43403 619 aa15.6■□□□□ 0.09
YIPF3-203ENST00000416380 NUCB1Q02818 461 aa15.6■□□□□ 0.09
YIPF3-203ENST00000416380 NBPF9Q3BBW0 867 aa15.6■□□□□ 0.09
YIPF3-203ENST00000416380 TBC1D9Q6ZT07 1266 aa15.6■□□□□ 0.09
YIPF3-203ENST00000416380 PNMA8AQ86V59 439 aaPredicted RBP15.6■□□□□ 0.09
YIPF3-203ENST00000416380 RWDD1Q9H446 243 aaPredicted RBP15.6■□□□□ 0.09
YIPF3-203ENST00000416380 PIH1D3Q9NQM4 214 aaKnown RBP15.6■□□□□ 0.09
YIPF3-203ENST00000416380 SNRKQ9NRH2 765 aa15.6■□□□□ 0.09
YIPF3-203ENST00000416380 GNL3LQ9NVN8 582 aaKnown RBP15.6■□□□□ 0.09
YIPF3-203ENST00000416380 H7C1D1 291 aa15.59■□□□□ 0.09
YIPF3-203ENST00000416380 ATP5JP18859 108 aa15.59■□□□□ 0.09
YIPF3-203ENST00000416380 LMOD1P29536 600 aaPredicted RBP15.59■□□□□ 0.09
YIPF3-203ENST00000416380 APOBEC3HQ6NTF7 200 aaKnown RBP15.59■□□□□ 0.09
YIPF3-203ENST00000416380 LDHDQ86WU2 507 aa15.59■□□□□ 0.09
YIPF3-203ENST00000416380 PI4K2BQ8TCG2 481 aa15.59■□□□□ 0.09
YIPF3-203ENST00000416380 ZC3H15Q8WU90 426 aaKnown RBP15.59■□□□□ 0.09
YIPF3-203ENST00000416380 FBXW7Q969H0 707 aa15.59■□□□□ 0.09
YIPF3-203ENST00000416380 PRMT6Q96LA8 375 aaPredicted RBP15.59■□□□□ 0.09
YIPF3-203ENST00000416380 ANTXR1Q9H6X2 564 aa15.59■□□□□ 0.09
YIPF3-203ENST00000416380 SERPINA10Q9UK55 444 aa15.59■□□□□ 0.09
YIPF3-203ENST00000416380 SPDYE2BA6NHP3 402 aa15.58■□□□□ 0.08
YIPF3-203ENST00000416380 SPDYE6P0CI01 402 aa15.58■□□□□ 0.08
YIPF3-203ENST00000416380 HDLBPQ00341 1268 aaKnown RBP15.58■□□□□ 0.08
YIPF3-203ENST00000416380 KIF4BQ2VIQ3 1234 aa15.58■□□□□ 0.08
YIPF3-203ENST00000416380 CCDC158Q5M9N0 1113 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms