RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 SNAP23O00161 211 aa25.64■■□□□ 1.69
PTPRU-203ENST00000415600 IRS2Q9Y4H2 1338 aa25.64■■□□□ 1.69
PTPRU-203ENST00000415600 SASH1O94885 1247 aa25.63■■□□□ 1.69
PTPRU-203ENST00000415600 TTLL12Q14166 644 aaPredicted RBP25.63■■□□□ 1.69
PTPRU-203ENST00000415600 VPS37DQ86XT2 251 aa25.63■■□□□ 1.69
PTPRU-203ENST00000415600 CDCA7LQ96GN5 454 aa25.63■■□□□ 1.69
PTPRU-203ENST00000415600 KAZALD1Q96I82 304 aa25.63■■□□□ 1.69
PTPRU-203ENST00000415600 TRMT2AQ8IZ69 625 aaKnown RBP25.62■■□□□ 1.69
PTPRU-203ENST00000415600 HIBADHP31937 336 aaKnown RBP25.61■■□□□ 1.69
PTPRU-203ENST00000415600 PAPPA2Q9BXP8 1791 aa25.61■■□□□ 1.69
PTPRU-203ENST00000415600 SLC10A3P09131 477 aa25.61■■□□□ 1.69
PTPRU-203ENST00000415600 METTL24Q5JXM2 366 aa25.61■■□□□ 1.69
PTPRU-203ENST00000415600 MTMR14Q8NCE2 650 aa25.61■■□□□ 1.69
PTPRU-203ENST00000415600 RIPOR2Q9Y4F9 1068 aa25.61■■□□□ 1.69
PTPRU-203ENST00000415600 FAM155AB1AL88 458 aaPredicted RBP25.6■■□□□ 1.69
PTPRU-203ENST00000415600 CAVIN4Q5BKX8 364 aa25.6■■□□□ 1.69
PTPRU-203ENST00000415600 API5Q9BZZ5 524 aaKnown RBP25.6■■□□□ 1.69
PTPRU-203ENST00000415600 USP44Q9H0E7 712 aa25.6■■□□□ 1.69
PTPRU-203ENST00000415600 KIF23Q02241 960 aaPredicted RBP25.59■■□□□ 1.69
PTPRU-203ENST00000415600 ARMC9Q7Z3E5 817 aa25.59■■□□□ 1.69
PTPRU-203ENST00000415600 SAGE1Q9NXZ1 904 aa25.59■■□□□ 1.69
PTPRU-203ENST00000415600 COL1A1P02452 1464 aaPredicted RBP25.58■■□□□ 1.69
PTPRU-203ENST00000415600 FAM205AQ6ZU69 1335 aa25.58■■□□□ 1.69
PTPRU-203ENST00000415600 F8W031 263 aaPredicted RBP25.58■■□□□ 1.69
PTPRU-203ENST00000415600 ANKRD44Q8N8A2 993 aa25.58■■□□□ 1.69
PTPRU-203ENST00000415600 ZBED3Q96IU2 234 aaPredicted RBP25.58■■□□□ 1.69
PTPRU-203ENST00000415600 PUS3Q9BZE2 481 aaKnown RBP25.58■■□□□ 1.69
PTPRU-203ENST00000415600 A0A1B0GUL6 1792 aa25.58■■□□□ 1.69
PTPRU-203ENST00000415600 RBM5P52756 815 aaKnown RBP eCLIP25.57■■□□□ 1.68
PTPRU-203ENST00000415600 CERS5Q8N5B7 392 aa25.57■■□□□ 1.68
PTPRU-203ENST00000415600 TSKSQ9UJT2 592 aa25.57■■□□□ 1.68
PTPRU-203ENST00000415600 PPP2R3BQ9Y5P8 575 aa25.57■■□□□ 1.68
PTPRU-203ENST00000415600 ZNF646O15015 1829 aaPredicted RBP25.57■■□□□ 1.68
PTPRU-203ENST00000415600 FRAT2O75474 233 aaPredicted RBP25.56■■□□□ 1.68
PTPRU-203ENST00000415600 UBTFL1P0CB47 393 aaPredicted RBP25.56■■□□□ 1.68
PTPRU-203ENST00000415600 MFSD14BQ5SR56 506 aa25.56■■□□□ 1.68
PTPRU-203ENST00000415600 TDRD7Q8NHU6 1098 aaKnown RBP25.56■■□□□ 1.68
PTPRU-203ENST00000415600 GYG1P46976 350 aa25.56■■□□□ 1.68
PTPRU-203ENST00000415600 CFAP100Q494V2 611 aa25.56■■□□□ 1.68
PTPRU-203ENST00000415600 FAM84BQ96KN1 310 aaPredicted RBP25.56■■□□□ 1.68
PTPRU-203ENST00000415600 SCAF8Q9UPN6 1271 aaKnown RBP25.56■■□□□ 1.68
PTPRU-203ENST00000415600 KIF16BQ96L93 1317 aa25.55■■□□□ 1.68
PTPRU-203ENST00000415600 PDE8BO95263 885 aa25.55■■□□□ 1.68
PTPRU-203ENST00000415600 PRAMEF18Q5VWM3 479 aa25.55■■□□□ 1.68
PTPRU-203ENST00000415600 RASAL3Q86YV0 1011 aa25.55■■□□□ 1.68
PTPRU-203ENST00000415600 NOB1Q9ULX3 412 aaKnown RBP25.55■■□□□ 1.68
PTPRU-203ENST00000415600 SPDYE2BA6NHP3 402 aa25.54■■□□□ 1.68
PTPRU-203ENST00000415600 IFIT1P09914 478 aaKnown RBP25.54■■□□□ 1.68
PTPRU-203ENST00000415600 SPDYE6P0CI01 402 aa25.54■■□□□ 1.68
PTPRU-203ENST00000415600 TBC1D22AQ8WUA7 517 aa25.54■■□□□ 1.68
PTPRU-203ENST00000415600 ZIC5Q96T25 663 aa25.54■■□□□ 1.68
PTPRU-203ENST00000415600 DEFB129Q9H1M3 183 aa25.54■■□□□ 1.68
PTPRU-203ENST00000415600 JAG2Q9Y219 1238 aa25.54■■□□□ 1.68
PTPRU-203ENST00000415600 UBE2Q2LH0YL09 131 aa25.53■■□□□ 1.68
PTPRU-203ENST00000415600 LRRC24Q50LG9 513 aa25.53■■□□□ 1.68
PTPRU-203ENST00000415600 TNFAIP1Q13829 316 aa25.52■■□□□ 1.68
PTPRU-203ENST00000415600 PUM3Q15397 648 aaKnown RBP25.52■■□□□ 1.68
PTPRU-203ENST00000415600 SUPT20HL1Q3ZLR7 823 aa25.52■■□□□ 1.68
PTPRU-203ENST00000415600 SERPINA10Q9UK55 444 aa25.52■■□□□ 1.68
PTPRU-203ENST00000415600 TTF2Q9UNY4 1162 aaKnown RBP25.52■■□□□ 1.68
PTPRU-203ENST00000415600 PPP1R12BO60237 982 aaPredicted RBP25.52■■□□□ 1.68
PTPRU-203ENST00000415600 FBXO33Q7Z6M2 555 aa25.52■■□□□ 1.68
PTPRU-203ENST00000415600 VEZTQ9HBM0 779 aa25.52■■□□□ 1.68
PTPRU-203ENST00000415600 FBXO3Q9UK99 471 aa25.52■■□□□ 1.68
PTPRU-203ENST00000415600 EYA2O00167 538 aa25.5■■□□□ 1.67
PTPRU-203ENST00000415600 IPO8O15397 1037 aaKnown RBP25.5■■□□□ 1.67
PTPRU-203ENST00000415600 ARHGAP45Q92619 1136 aa25.5■■□□□ 1.67
PTPRU-203ENST00000415600 ABHD8Q96I13 439 aa25.5■■□□□ 1.67
PTPRU-203ENST00000415600 CSRNP1Q96S65 589 aa25.5■■□□□ 1.67
PTPRU-203ENST00000415600 TRPA1O75762 1119 aa25.49■■□□□ 1.67
PTPRU-203ENST00000415600 SLC5A1P13866 664 aa25.49■■□□□ 1.67
PTPRU-203ENST00000415600 MOB2Q70IA6 237 aa25.49■■□□□ 1.67
PTPRU-203ENST00000415600 VGLL2Q8N8G2 317 aa25.49■■□□□ 1.67
PTPRU-203ENST00000415600 RNF186Q9NXI6 227 aa25.49■■□□□ 1.67
PTPRU-203ENST00000415600 RARSP54136 660 aaKnown RBP25.48■■□□□ 1.67
PTPRU-203ENST00000415600 KLHDC4Q8TBB5 520 aa25.48■■□□□ 1.67
PTPRU-203ENST00000415600 PRMT6Q96LA8 375 aaPredicted RBP25.48■■□□□ 1.67
PTPRU-203ENST00000415600 ANGEL1Q9UNK9 670 aaKnown RBP25.48■■□□□ 1.67
PTPRU-203ENST00000415600 CLRN2A0PK11 232 aa25.48■■□□□ 1.67
PTPRU-203ENST00000415600 UNCXA6NJT0 531 aa25.48■■□□□ 1.67
PTPRU-203ENST00000415600 SREBF2Q12772 1141 aa25.48■■□□□ 1.67
PTPRU-203ENST00000415600 PRKG1Q13976 671 aa25.48■■□□□ 1.67
PTPRU-203ENST00000415600 CHAF1AQ13111 956 aaPredicted RBP25.47■■□□□ 1.67
PTPRU-203ENST00000415600 LPIN2Q92539 896 aa25.47■■□□□ 1.67
PTPRU-203ENST00000415600 SUGT1Q9Y2Z0 365 aa25.47■■□□□ 1.67
PTPRU-203ENST00000415600 MAST3O60307 1309 aa25.46■■□□□ 1.67
PTPRU-203ENST00000415600 AKAP11Q9UKA4 1901 aa25.46■■□□□ 1.67
PTPRU-203ENST00000415600 HDLBPQ00341 1268 aaKnown RBP25.46■■□□□ 1.67
PTPRU-203ENST00000415600 ERICH6BQ5W0A0 696 aa25.46■■□□□ 1.67
PTPRU-203ENST00000415600 CIAO1O76071 339 aa25.45■■□□□ 1.66
PTPRU-203ENST00000415600 TNNI2P48788 182 aa25.45■■□□□ 1.66
PTPRU-203ENST00000415600 ECM29Q5VYK3 1845 aa25.44■■□□□ 1.66
PTPRU-203ENST00000415600 GNAI3P08754 354 aa25.44■■□□□ 1.66
PTPRU-203ENST00000415600 IREB2P48200 963 aaKnown RBP25.44■■□□□ 1.66
PTPRU-203ENST00000415600 RFX5P48382 616 aaPredicted RBP25.44■■□□□ 1.66
PTPRU-203ENST00000415600 PTPN12Q05209 780 aaKnown RBP25.44■■□□□ 1.66
PTPRU-203ENST00000415600 SPDYE2Q495Y8 402 aa25.44■■□□□ 1.66
PTPRU-203ENST00000415600 LDLRAD1Q5T700 205 aa25.44■■□□□ 1.66
PTPRU-203ENST00000415600 DZIP1LQ8IYY4 767 aaKnown RBP25.44■■□□□ 1.66
PTPRU-203ENST00000415600 SLC10A4Q96EP9 437 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms