RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 ZBTB38Q8NAP3 1195 aaPredicted RBP10.64□□□□□ -0.71
UPF3AP1-201ENST00000413731 HYPKQ9NX55 129 aa10.64□□□□□ -0.71
UPF3AP1-201ENST00000413731 PCDH10Q9P2E7 1040 aa10.64□□□□□ -0.71
UPF3AP1-201ENST00000413731 PITPNM2Q9BZ72 1349 aa10.63□□□□□ -0.71
UPF3AP1-201ENST00000413731 OTOFQ9HC10 1997 aa10.63□□□□□ -0.71
UPF3AP1-201ENST00000413731 RBBP6Q7Z6E9 1792 aaKnown RBP10.63□□□□□ -0.71
UPF3AP1-201ENST00000413731 G3V3G9 751 aa10.63□□□□□ -0.71
UPF3AP1-201ENST00000413731 APAF1O14727 1248 aa10.63□□□□□ -0.71
UPF3AP1-201ENST00000413731 MAP2K5Q13163 448 aa10.63□□□□□ -0.71
UPF3AP1-201ENST00000413731 TRIM28Q13263 835 aaKnown RBP10.63□□□□□ -0.71
UPF3AP1-201ENST00000413731 RIC3Q7Z5B4 369 aa10.63□□□□□ -0.71
UPF3AP1-201ENST00000413731 AGBL3Q8NEM8 1001 aa10.63□□□□□ -0.71
UPF3AP1-201ENST00000413731 JARID2Q92833 1246 aaPredicted RBP10.63□□□□□ -0.71
UPF3AP1-201ENST00000413731 GMLQ99445 158 aa10.63□□□□□ -0.71
UPF3AP1-201ENST00000413731 MYD88Q99836 296 aa10.63□□□□□ -0.71
UPF3AP1-201ENST00000413731 MYOZ2Q9NPC6 264 aa10.63□□□□□ -0.71
UPF3AP1-201ENST00000413731 MBIPQ9NS73 344 aa10.63□□□□□ -0.71
UPF3AP1-201ENST00000413731 HPS5Q9UPZ3 1129 aa10.63□□□□□ -0.71
UPF3AP1-201ENST00000413731 XDHP47989 1333 aa10.62□□□□□ -0.71
UPF3AP1-201ENST00000413731 GPR37O15354 613 aa10.62□□□□□ -0.71
UPF3AP1-201ENST00000413731 USP17L8P0C7I0 530 aa10.62□□□□□ -0.71
UPF3AP1-201ENST00000413731 FKBP1BP68106 108 aa10.62□□□□□ -0.71
UPF3AP1-201ENST00000413731 CCDC152Q4G0S7 254 aa10.62□□□□□ -0.71
UPF3AP1-201ENST00000413731 PRPF38BQ5VTL8 546 aaKnown RBP10.62□□□□□ -0.71
UPF3AP1-201ENST00000413731 PRAMEF18Q5VWM3 479 aa10.62□□□□□ -0.71
UPF3AP1-201ENST00000413731 FAM9BQ8IZU0 186 aa10.62□□□□□ -0.71
UPF3AP1-201ENST00000413731 MXD3Q9BW11 206 aa10.62□□□□□ -0.71
UPF3AP1-201ENST00000413731 PHAXQ9H814 394 aaKnown RBP10.62□□□□□ -0.71
UPF3AP1-201ENST00000413731 WTIPA6NIX2 430 aaPredicted RBP10.61□□□□□ -0.71
UPF3AP1-201ENST00000413731 PDE8AO60658 829 aa10.61□□□□□ -0.71
UPF3AP1-201ENST00000413731 TBC1D8O95759 1140 aa10.61□□□□□ -0.71
UPF3AP1-201ENST00000413731 PCCAP05165 728 aaPredicted RBP10.61□□□□□ -0.71
UPF3AP1-201ENST00000413731 MAP3K9P80192 1104 aa10.61□□□□□ -0.71
UPF3AP1-201ENST00000413731 DIEXFQ68CQ4 756 aaKnown RBP10.61□□□□□ -0.71
UPF3AP1-201ENST00000413731 ZNF296Q8WUU4 475 aaPredicted RBP10.61□□□□□ -0.71
UPF3AP1-201ENST00000413731 MED23Q9ULK4 1368 aa10.61□□□□□ -0.71
UPF3AP1-201ENST00000413731 KIAA0100Q14667 2235 aaKnown RBP10.61□□□□□ -0.71
UPF3AP1-201ENST00000413731 USP17L3A6NCW0 530 aa10.6□□□□□ -0.71
UPF3AP1-201ENST00000413731 USP17L4A6NCW7 530 aa10.6□□□□□ -0.71
UPF3AP1-201ENST00000413731 UBE2Q2LH0YL09 131 aa10.6□□□□□ -0.71
UPF3AP1-201ENST00000413731 ATP2B4P23634 1241 aa10.6□□□□□ -0.71
UPF3AP1-201ENST00000413731 FOXK1P85037 733 aa10.6□□□□□ -0.71
UPF3AP1-201ENST00000413731 CALD1Q05682 793 aaKnown RBP10.6□□□□□ -0.71
UPF3AP1-201ENST00000413731 NBPF9Q3BBW0 867 aa10.6□□□□□ -0.71
UPF3AP1-201ENST00000413731 USP17L1Q7RTZ2 530 aa10.6□□□□□ -0.71
UPF3AP1-201ENST00000413731 ANKRD18AQ8IVF6 992 aa10.6□□□□□ -0.71
UPF3AP1-201ENST00000413731 CWC25Q9NXE8 425 aaPredicted RBP10.6□□□□□ -0.71
UPF3AP1-201ENST00000413731 HDAC9Q9UKV0 1011 aa10.6□□□□□ -0.71
UPF3AP1-201ENST00000413731 IRF6O14896 467 aa10.59□□□□□ -0.71
UPF3AP1-201ENST00000413731 SASH1O94885 1247 aa10.59□□□□□ -0.71
UPF3AP1-201ENST00000413731 ZNF853P0CG23 659 aa10.59□□□□□ -0.71
UPF3AP1-201ENST00000413731 CTSWP56202 376 aa10.59□□□□□ -0.71
UPF3AP1-201ENST00000413731 FLIIQ13045 1269 aa10.59□□□□□ -0.71
UPF3AP1-201ENST00000413731 TTLL12Q14166 644 aaPredicted RBP10.59□□□□□ -0.71
UPF3AP1-201ENST00000413731 DACT2Q5SW24 774 aa10.59□□□□□ -0.71
UPF3AP1-201ENST00000413731 PLPP6Q8IY26 295 aa10.59□□□□□ -0.71
UPF3AP1-201ENST00000413731 CCDC191Q8NCU4 936 aa10.59□□□□□ -0.71
UPF3AP1-201ENST00000413731 FBXW7Q969H0 707 aa10.59□□□□□ -0.71
UPF3AP1-201ENST00000413731 ARAP2Q8WZ64 1704 aa10.58□□□□□ -0.72
UPF3AP1-201ENST00000413731 HTTP42858 3142 aa10.58□□□□□ -0.72
UPF3AP1-201ENST00000413731 CACNA1FO60840 1977 aa10.58□□□□□ -0.72
UPF3AP1-201ENST00000413731 SSC5DA1L4H1 1573 aa10.58□□□□□ -0.72
UPF3AP1-201ENST00000413731 GPR25O00155 361 aa10.58□□□□□ -0.72
UPF3AP1-201ENST00000413731 ELL2O00472 640 aaPredicted RBP10.58□□□□□ -0.72
UPF3AP1-201ENST00000413731 WNT10BO00744 389 aa10.58□□□□□ -0.72
UPF3AP1-201ENST00000413731 HSP90B1P14625 803 aaKnown RBP10.58□□□□□ -0.72
UPF3AP1-201ENST00000413731 KLRK1P26718 216 aa10.58□□□□□ -0.72
UPF3AP1-201ENST00000413731 TIE1P35590 1138 aa10.58□□□□□ -0.72
UPF3AP1-201ENST00000413731 PKN2Q16513 984 aaKnown RBP10.58□□□□□ -0.72
UPF3AP1-201ENST00000413731 PODNQ7Z5L7 613 aa10.58□□□□□ -0.72
UPF3AP1-201ENST00000413731 CDC5LQ99459 802 aaKnown RBP10.58□□□□□ -0.72
UPF3AP1-201ENST00000413731 METTL22Q9BUU2 404 aaPredicted RBP10.58□□□□□ -0.72
UPF3AP1-201ENST00000413731 TTLL13PA6NNM8 815 aa10.57□□□□□ -0.72
UPF3AP1-201ENST00000413731 CCER2I3L3R5 266 aa10.57□□□□□ -0.72
UPF3AP1-201ENST00000413731 TXNRD3Q86VQ6 643 aa10.57□□□□□ -0.72
UPF3AP1-201ENST00000413731 PARP9Q8IXQ6 854 aa10.57□□□□□ -0.72
UPF3AP1-201ENST00000413731 R3HDMLQ9H3Y0 253 aa10.57□□□□□ -0.72
UPF3AP1-201ENST00000413731 GREM2Q9H772 168 aa10.57□□□□□ -0.72
UPF3AP1-201ENST00000413731 IFT57Q9NWB7 429 aa10.57□□□□□ -0.72
UPF3AP1-201ENST00000413731 MINPP1Q9UNW1 487 aa10.57□□□□□ -0.72
UPF3AP1-201ENST00000413731 MAP3K2Q9Y2U5 619 aa10.57□□□□□ -0.72
UPF3AP1-201ENST00000413731 COL1A1P02452 1464 aaPredicted RBP10.56□□□□□ -0.72
UPF3AP1-201ENST00000413731 APBB1O00213 710 aa10.56□□□□□ -0.72
UPF3AP1-201ENST00000413731 IGKV5-2P06315 115 aa10.56□□□□□ -0.72
UPF3AP1-201ENST00000413731 NF2P35240 595 aa10.56□□□□□ -0.72
UPF3AP1-201ENST00000413731 TM4SF4P48230 202 aa10.56□□□□□ -0.72
UPF3AP1-201ENST00000413731 CCT4P50991 539 aaKnown RBP10.56□□□□□ -0.72
UPF3AP1-201ENST00000413731 PTPN12Q05209 780 aaKnown RBP10.56□□□□□ -0.72
UPF3AP1-201ENST00000413731 PRKG1Q13976 671 aa10.56□□□□□ -0.72
UPF3AP1-201ENST00000413731 AMHR2Q16671 573 aa10.56□□□□□ -0.72
UPF3AP1-201ENST00000413731 FBXO46Q6PJ61 603 aaPredicted RBP10.56□□□□□ -0.72
UPF3AP1-201ENST00000413731 C8orf58Q8NAV2 365 aa10.56□□□□□ -0.72
UPF3AP1-201ENST00000413731 TTLL11Q8NHH1 800 aa10.56□□□□□ -0.72
UPF3AP1-201ENST00000413731 FZD1Q9UP38 647 aa10.56□□□□□ -0.72
UPF3AP1-201ENST00000413731 SALL2Q9Y467 1007 aaPredicted RBP10.56□□□□□ -0.72
UPF3AP1-201ENST00000413731 MYO3BQ8WXR4 1341 aa10.56□□□□□ -0.72
UPF3AP1-201ENST00000413731 MKI67P46013 3256 aaKnown RBP10.55□□□□□ -0.72
UPF3AP1-201ENST00000413731 DDX58O95786 925 aaKnown RBP10.55□□□□□ -0.72
UPF3AP1-201ENST00000413731 GNAI1P63096 354 aa10.55□□□□□ -0.72
UPF3AP1-201ENST00000413731 SREBF2Q12772 1141 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms