RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 FXR1P51114 621 aaKnown RBP eCLIP13.12□□□□□ -0.31
RPAIN-204ENST00000405578 AAMPQ13685 434 aa13.12□□□□□ -0.31
RPAIN-204ENST00000405578 EPHA10Q5JZY3 1008 aa13.12□□□□□ -0.31
RPAIN-204ENST00000405578 KCNQ5Q9NR82 932 aa13.12□□□□□ -0.31
RPAIN-204ENST00000405578 DOK7Q18PE1 504 aa13.11□□□□□ -0.31
RPAIN-204ENST00000405578 MOB2Q70IA6 237 aa13.11□□□□□ -0.31
RPAIN-204ENST00000405578 ANKRD44Q8N8A2 993 aa13.11□□□□□ -0.31
RPAIN-204ENST00000405578 KAZALD1Q96I82 304 aa13.11□□□□□ -0.31
RPAIN-204ENST00000405578 SEC31BQ9NQW1 1179 aa13.11□□□□□ -0.31
RPAIN-204ENST00000405578 ZBTB40Q9NUA8 1239 aa13.11□□□□□ -0.31
RPAIN-204ENST00000405578 HTTP42858 3142 aa13.1□□□□□ -0.31
RPAIN-204ENST00000405578 C6orf229H3BNL8 230 aa13.1□□□□□ -0.31
RPAIN-204ENST00000405578 SRGAP3O43295 1099 aa13.1□□□□□ -0.31
RPAIN-204ENST00000405578 NEFLP07196 543 aa13.1□□□□□ -0.31
RPAIN-204ENST00000405578 FKBP1BP68106 108 aa13.1□□□□□ -0.31
RPAIN-204ENST00000405578 ANGEL2Q5VTE6 544 aaKnown RBP13.1□□□□□ -0.31
RPAIN-204ENST00000405578 CELF1Q92879 486 aaKnown RBP13.1□□□□□ -0.31
RPAIN-204ENST00000405578 NSFL1CQ9UNZ2 370 aaKnown RBP13.1□□□□□ -0.31
RPAIN-204ENST00000405578 POTEFA5A3E0 1075 aa13.09□□□□□ -0.31
RPAIN-204ENST00000405578 FKTNO75072 461 aa13.09□□□□□ -0.31
RPAIN-204ENST00000405578 HMMRO75330 724 aa13.09□□□□□ -0.31
RPAIN-204ENST00000405578 MKRN3Q13064 507 aaKnown RBP13.09□□□□□ -0.31
RPAIN-204ENST00000405578 MTX1Q13505 466 aa13.09□□□□□ -0.31
RPAIN-204ENST00000405578 NOM1Q5C9Z4 860 aaKnown RBP13.09□□□□□ -0.31
RPAIN-204ENST00000405578 RPAP2Q8IXW5 612 aaPredicted RBP13.09□□□□□ -0.31
RPAIN-204ENST00000405578 CRBNQ96SW2 442 aa13.09□□□□□ -0.31
RPAIN-204ENST00000405578 C1orf115Q9H7X2 142 aa13.09□□□□□ -0.31
RPAIN-204ENST00000405578 CNNM1Q9NRU3 951 aa13.09□□□□□ -0.31
RPAIN-204ENST00000405578 BSDC1Q9NW68 430 aaPredicted RBP13.09□□□□□ -0.31
RPAIN-204ENST00000405578 POLLQ9UGP5 575 aa13.09□□□□□ -0.31
RPAIN-204ENST00000405578 TRIOBPQ9H2D6 2365 aa13.09□□□□□ -0.31
RPAIN-204ENST00000405578 LAMB1P07942 1786 aa13.08□□□□□ -0.32
RPAIN-204ENST00000405578 UBE2Q2LH0YL09 131 aa13.08□□□□□ -0.32
RPAIN-204ENST00000405578 GPSM2P81274 684 aa13.08□□□□□ -0.32
RPAIN-204ENST00000405578 SCARF1Q14162 830 aa13.08□□□□□ -0.32
RPAIN-204ENST00000405578 LDHAL6AQ6ZMR3 332 aa13.08□□□□□ -0.32
RPAIN-204ENST00000405578 SCAF8Q9UPN6 1271 aaKnown RBP13.08□□□□□ -0.32
RPAIN-204ENST00000405578 CEP290O15078 2479 aa13.08□□□□□ -0.32
RPAIN-204ENST00000405578 ZNF646O15015 1829 aaPredicted RBP13.07□□□□□ -0.32
RPAIN-204ENST00000405578 VIL1P09327 827 aaKnown RBP13.07□□□□□ -0.32
RPAIN-204ENST00000405578 TM4SF4P48230 202 aa13.07□□□□□ -0.32
RPAIN-204ENST00000405578 ATP8B2P98198 1209 aa13.07□□□□□ -0.32
RPAIN-204ENST00000405578 EYA3Q99504 573 aa13.07□□□□□ -0.32
RPAIN-204ENST00000405578 ANKRD2Q9GZV1 360 aa13.07□□□□□ -0.32
RPAIN-204ENST00000405578 R3HDMLQ9H3Y0 253 aa13.07□□□□□ -0.32
RPAIN-204ENST00000405578 ANKIB1Q9P2G1 1089 aa13.07□□□□□ -0.32
RPAIN-204ENST00000405578 FBXO3Q9UK99 471 aa13.07□□□□□ -0.32
RPAIN-204ENST00000405578 ZNF609O15014 1411 aa13.06□□□□□ -0.32
RPAIN-204ENST00000405578 ZNF280AP59817 542 aaPredicted RBP13.06□□□□□ -0.32
RPAIN-204ENST00000405578 TTLL12Q14166 644 aaPredicted RBP13.06□□□□□ -0.32
RPAIN-204ENST00000405578 CEP85Q6P2H3 762 aa13.06□□□□□ -0.32
RPAIN-204ENST00000405578 CENPFP49454 3210 aa13.05□□□□□ -0.32
RPAIN-204ENST00000405578 KCNJ4P48050 445 aa13.05□□□□□ -0.32
RPAIN-204ENST00000405578 SREBF2Q12772 1141 aa13.05□□□□□ -0.32
RPAIN-204ENST00000405578 G3BP1Q13283 466 aaKnown RBP eCLIP13.05□□□□□ -0.32
RPAIN-204ENST00000405578 PRAMEF18Q5VWM3 479 aa13.05□□□□□ -0.32
RPAIN-204ENST00000405578 TBC1D16Q8TBP0 767 aa13.05□□□□□ -0.32
RPAIN-204ENST00000405578 SSH3Q8TE77 659 aa13.05□□□□□ -0.32
RPAIN-204ENST00000405578 ZNF594Q96JF6 807 aaPredicted RBP13.05□□□□□ -0.32
RPAIN-204ENST00000405578 COPRSQ9NQ92 184 aa13.05□□□□□ -0.32
RPAIN-204ENST00000405578 MINPP1Q9UNW1 487 aa13.05□□□□□ -0.32
RPAIN-204ENST00000405578 TRIM17Q9Y577 477 aa13.05□□□□□ -0.32
RPAIN-204ENST00000405578 XDHP47989 1333 aa13.05□□□□□ -0.32
RPAIN-204ENST00000405578 MROH5Q6ZUA9 1318 aa13.05□□□□□ -0.32
RPAIN-204ENST00000405578 PITPNM2Q9BZ72 1349 aa13.05□□□□□ -0.32
RPAIN-204ENST00000405578 PNMA6EA0A0J9YXQ4 647 aa13.04□□□□□ -0.32
RPAIN-204ENST00000405578 EYA2O00167 538 aa13.04□□□□□ -0.32
RPAIN-204ENST00000405578 CIAO1O76071 339 aa13.04□□□□□ -0.32
RPAIN-204ENST00000405578 IL15P40933 162 aaPredicted RBP13.04□□□□□ -0.32
RPAIN-204ENST00000405578 PTPN12Q05209 780 aaKnown RBP13.04□□□□□ -0.32
RPAIN-204ENST00000405578 OS9Q13438 667 aaPredicted RBP13.04□□□□□ -0.32
RPAIN-204ENST00000405578 HSP90AB4PQ58FF6 505 aa13.04□□□□□ -0.32
RPAIN-204ENST00000405578 METTL24Q5JXM2 366 aa13.04□□□□□ -0.32
RPAIN-204ENST00000405578 RSBN1LQ6PCB5 846 aaPredicted RBP13.04□□□□□ -0.32
RPAIN-204ENST00000405578 CFHR5Q9BXR6 569 aa13.04□□□□□ -0.32
RPAIN-204ENST00000405578 ZC3H12CQ9C0D7 883 aaKnown RBP13.04□□□□□ -0.32
RPAIN-204ENST00000405578 SPEF2Q9C093 1822 aa13.04□□□□□ -0.32
RPAIN-204ENST00000405578 G3V3G9 751 aa13.03□□□□□ -0.32
RPAIN-204ENST00000405578 SURF6O75683 361 aaKnown RBP13.03□□□□□ -0.32
RPAIN-204ENST00000405578 ATP2B4P23634 1241 aa13.03□□□□□ -0.32
RPAIN-204ENST00000405578 RFX5P48382 616 aaPredicted RBP13.03□□□□□ -0.32
RPAIN-204ENST00000405578 IRX6P78412 446 aaPredicted RBP13.03□□□□□ -0.32
RPAIN-204ENST00000405578 POLA2Q14181 598 aa13.03□□□□□ -0.32
RPAIN-204ENST00000405578 DCAF8Q5TAQ9 597 aa13.03□□□□□ -0.32
RPAIN-204ENST00000405578 OTOP1Q7RTM1 612 aa13.03□□□□□ -0.32
RPAIN-204ENST00000405578 AGBL3Q8NEM8 1001 aa13.03□□□□□ -0.32
RPAIN-204ENST00000405578 EXOC6Q8TAG9 804 aa13.03□□□□□ -0.32
RPAIN-204ENST00000405578 SIL1Q9H173 461 aa13.03□□□□□ -0.32
RPAIN-204ENST00000405578 MYOZ2Q9NPC6 264 aa13.03□□□□□ -0.32
RPAIN-204ENST00000405578 PODXL2Q9NZ53 605 aa13.03□□□□□ -0.32
RPAIN-204ENST00000405578 GGA1Q9UJY5 639 aa13.03□□□□□ -0.32
RPAIN-204ENST00000405578 COLQQ9Y215 455 aaPredicted RBP13.03□□□□□ -0.32
RPAIN-204ENST00000405578 LEMD3Q9Y2U8 911 aa13.03□□□□□ -0.32
RPAIN-204ENST00000405578 UFL1O94874 794 aa13.02□□□□□ -0.33
RPAIN-204ENST00000405578 EN2P19622 333 aaPredicted RBP13.02□□□□□ -0.33
RPAIN-204ENST00000405578 CHRNDQ07001 517 aa13.02□□□□□ -0.33
RPAIN-204ENST00000405578 ERC1Q8IUD2 1116 aa13.02□□□□□ -0.33
RPAIN-204ENST00000405578 KLHDC4Q8TBB5 520 aa13.02□□□□□ -0.33
RPAIN-204ENST00000405578 CEP126Q9P2H0 1117 aa13.02□□□□□ -0.33
RPAIN-204ENST00000405578 PA2G4Q9UQ80 394 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms