RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 ZFYP08048 801 aaPredicted RBP25.28■■□□□ 1.64
TPM1-208ENST00000404484 MCAMP43121 646 aa25.28■■□□□ 1.64
TPM1-208ENST00000404484 DPP8Q6V1X1 898 aaPredicted RBP25.28■■□□□ 1.64
TPM1-208ENST00000404484 GNL3LQ9NVN8 582 aaKnown RBP25.28■■□□□ 1.64
TPM1-208ENST00000404484 GLTPD2A6NH11 291 aa25.27■■□□□ 1.64
TPM1-208ENST00000404484 ANAPC15P60006 121 aa25.27■■□□□ 1.64
TPM1-208ENST00000404484 SCARF1Q14162 830 aa25.27■■□□□ 1.64
TPM1-208ENST00000404484 CAVIN4Q5BKX8 364 aa25.27■■□□□ 1.64
TPM1-208ENST00000404484 FAM227BQ96M60 508 aa25.27■■□□□ 1.64
TPM1-208ENST00000404484 RTFDC1Q9BY42 306 aaPredicted RBP25.27■■□□□ 1.64
TPM1-208ENST00000404484 IL25Q9H293 177 aa25.27■■□□□ 1.64
TPM1-208ENST00000404484 NMRK2Q9NPI5 230 aa25.27■■□□□ 1.64
TPM1-208ENST00000404484 ZAP70P43403 619 aa25.27■■□□□ 1.64
TPM1-208ENST00000404484 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.27■■□□□ 1.64
TPM1-208ENST00000404484 LSG1Q9H089 658 aaKnown RBP25.27■■□□□ 1.64
TPM1-208ENST00000404484 AKAP11Q9UKA4 1901 aa25.26■■□□□ 1.64
TPM1-208ENST00000404484 DICER1Q9UPY3 1922 aaKnown RBP25.26■■□□□ 1.64
TPM1-208ENST00000404484 MED23Q9ULK4 1368 aa25.26■■□□□ 1.63
TPM1-208ENST00000404484 A0A0D9SFI3 127 aa25.26■■□□□ 1.63
TPM1-208ENST00000404484 RABEP1Q15276 862 aa25.26■■□□□ 1.63
TPM1-208ENST00000404484 ZSCAN25Q6NSZ9 544 aa25.26■■□□□ 1.63
TPM1-208ENST00000404484 HELLSQ9NRZ9 838 aa25.26■■□□□ 1.63
TPM1-208ENST00000404484 NSFL1CQ9UNZ2 370 aaKnown RBP25.26■■□□□ 1.63
TPM1-208ENST00000404484 DPY19L2Q6NUT2 758 aa25.25■■□□□ 1.63
TPM1-208ENST00000404484 KIF2CQ99661 725 aa25.25■■□□□ 1.63
TPM1-208ENST00000404484 SNAP23O00161 211 aa25.24■■□□□ 1.63
TPM1-208ENST00000404484 KIF3CO14782 793 aa25.24■■□□□ 1.63
TPM1-208ENST00000404484 RNF113AO15541 343 aaKnown RBP25.24■■□□□ 1.63
TPM1-208ENST00000404484 GPSM2P81274 684 aa25.24■■□□□ 1.63
TPM1-208ENST00000404484 MCMDC2Q4G0Z9 681 aa25.24■■□□□ 1.63
TPM1-208ENST00000404484 SPATA5Q8NB90 893 aa25.24■■□□□ 1.63
TPM1-208ENST00000404484 IL27Q8NEV9 243 aa25.24■■□□□ 1.63
TPM1-208ENST00000404484 LEMD3Q9Y2U8 911 aa25.24■■□□□ 1.63
TPM1-208ENST00000404484 ZNF804BA4D1E1 1349 aa25.24■■□□□ 1.63
TPM1-208ENST00000404484 XDHP47989 1333 aa25.24■■□□□ 1.63
TPM1-208ENST00000404484 CCDC171Q6TFL3 1326 aa25.24■■□□□ 1.63
TPM1-208ENST00000404484 VPS37DQ86XT2 251 aa25.23■■□□□ 1.63
TPM1-208ENST00000404484 LARGE2Q8N3Y3 721 aa25.23■■□□□ 1.63
TPM1-208ENST00000404484 SUPT20HQ8NEM7 779 aa25.23■■□□□ 1.63
TPM1-208ENST00000404484 ANTXR1Q9H6X2 564 aa25.23■■□□□ 1.63
TPM1-208ENST00000404484 RRAGCQ9HB90 399 aa25.23■■□□□ 1.63
TPM1-208ENST00000404484 HMG20BQ9P0W2 317 aa25.23■■□□□ 1.63
TPM1-208ENST00000404484 FZD9O00144 591 aa25.22■■□□□ 1.63
TPM1-208ENST00000404484 BCAMP50895 628 aa25.22■■□□□ 1.63
TPM1-208ENST00000404484 AOC3Q16853 763 aa25.22■■□□□ 1.63
TPM1-208ENST00000404484 ZMYM1Q5SVZ6 1142 aa25.22■■□□□ 1.63
TPM1-208ENST00000404484 JDP2Q8WYK2 163 aa25.22■■□□□ 1.63
TPM1-208ENST00000404484 SEMA3EO15041 775 aa25.22■■□□□ 1.63
TPM1-208ENST00000404484 PPIP5K2O43314 1243 aa25.22■■□□□ 1.63
TPM1-208ENST00000404484 HSPA4P34932 840 aa25.22■■□□□ 1.63
TPM1-208ENST00000404484 RASGRF1Q13972 1273 aa25.22■■□□□ 1.63
TPM1-208ENST00000404484 SNX21Q969T3 373 aa25.22■■□□□ 1.63
TPM1-208ENST00000404484 IL17RAQ96F46 866 aa25.22■■□□□ 1.63
TPM1-208ENST00000404484 VPS33BQ9H267 617 aa25.22■■□□□ 1.63
TPM1-208ENST00000404484 ANKIB1Q9P2G1 1089 aa25.22■■□□□ 1.63
TPM1-208ENST00000404484 POLLQ9UGP5 575 aa25.22■■□□□ 1.63
TPM1-208ENST00000404484 COL4A5P29400 1685 aa25.21■■□□□ 1.63
TPM1-208ENST00000404484 ZBTB22O15209 634 aa25.21■■□□□ 1.63
TPM1-208ENST00000404484 DDNO94850 711 aaPredicted RBP25.21■■□□□ 1.63
TPM1-208ENST00000404484 CYP2E1P05181 493 aaPredicted RBP25.21■■□□□ 1.63
TPM1-208ENST00000404484 PI16Q6UXB8 463 aa25.21■■□□□ 1.63
TPM1-208ENST00000404484 TIAM2Q8IVF5 1701 aa25.21■■□□□ 1.63
TPM1-208ENST00000404484 MYH7P12883 1935 aa25.21■■□□□ 1.63
TPM1-208ENST00000404484 HSCBQ8IWL3 235 aa25.2■■□□□ 1.62
TPM1-208ENST00000404484 KIAA2012Q0VF49 1180 aa25.19■■□□□ 1.62
TPM1-208ENST00000404484 FBXO33Q7Z6M2 555 aa25.19■■□□□ 1.62
TPM1-208ENST00000404484 PODXL2Q9NZ53 605 aa25.19■■□□□ 1.62
TPM1-208ENST00000404484 DENND2AQ9ULE3 1009 aa25.19■■□□□ 1.62
TPM1-208ENST00000404484 ZNF541Q9H0D2 1346 aa25.19■■□□□ 1.62
TPM1-208ENST00000404484 LRRC37AA6NMS7 1700 aa25.19■■□□□ 1.62
TPM1-208ENST00000404484 POTECB2RU33 542 aa25.18■■□□□ 1.62
TPM1-208ENST00000404484 ATP2B4P23634 1241 aa25.18■■□□□ 1.62
TPM1-208ENST00000404484 GYG1P46976 350 aa25.18■■□□□ 1.62
TPM1-208ENST00000404484 TBC1D16Q8TBP0 767 aa25.18■■□□□ 1.62
TPM1-208ENST00000404484 MAP4K1Q92918 833 aa25.18■■□□□ 1.62
TPM1-208ENST00000404484 FAM84BQ96KN1 310 aaPredicted RBP25.18■■□□□ 1.62
TPM1-208ENST00000404484 PDS5AQ29RF7 1337 aaKnown RBP25.18■■□□□ 1.62
TPM1-208ENST00000404484 C6orf229H3BNL8 230 aa25.18■■□□□ 1.62
TPM1-208ENST00000404484 APPBP2Q92624 585 aa25.18■■□□□ 1.62
TPM1-208ENST00000404484 HIBADHP31937 336 aaKnown RBP25.17■■□□□ 1.62
TPM1-208ENST00000404484 PTH1RQ03431 593 aa25.17■■□□□ 1.62
TPM1-208ENST00000404484 MAP3K12Q12852 859 aa25.17■■□□□ 1.62
TPM1-208ENST00000404484 WASHC4Q2M389 1173 aa25.17■■□□□ 1.62
TPM1-208ENST00000404484 RNF20Q5VTR2 975 aa25.17■■□□□ 1.62
TPM1-208ENST00000404484 C15orf52Q6ZUT6 534 aaKnown RBP25.17■■□□□ 1.62
TPM1-208ENST00000404484 ZNF589Q86UQ0 364 aaPredicted RBP25.17■■□□□ 1.62
TPM1-208ENST00000404484 NIM1KQ8IY84 436 aa25.17■■□□□ 1.62
TPM1-208ENST00000404484 TBC1D2Q9BYX2 928 aa25.17■■□□□ 1.62
TPM1-208ENST00000404484 PIH1D3Q9NQM4 214 aaKnown RBP25.17■■□□□ 1.62
TPM1-208ENST00000404484 DUOX1Q9NRD9 1551 aa25.16■■□□□ 1.62
TPM1-208ENST00000404484 ST18O60284 1047 aa25.16■■□□□ 1.62
TPM1-208ENST00000404484 IDH1O75874 414 aaKnown RBP25.16■■□□□ 1.62
TPM1-208ENST00000404484 UBE3CQ15386 1083 aa25.16■■□□□ 1.62
TPM1-208ENST00000404484 GPR101Q96P66 508 aaPredicted RBP25.16■■□□□ 1.62
TPM1-208ENST00000404484 VEGFAP15692 232 aaPredicted RBP25.15■■□□□ 1.62
TPM1-208ENST00000404484 ADD2P35612 726 aa25.15■■□□□ 1.62
TPM1-208ENST00000404484 C1QTNF8P60827 252 aa25.15■■□□□ 1.62
TPM1-208ENST00000404484 GGA1Q9UJY5 639 aa25.15■■□□□ 1.62
TPM1-208ENST00000404484 RBM8AQ9Y5S9 174 aaKnown RBP25.15■■□□□ 1.62
TPM1-208ENST00000404484 DOCK2Q92608 1830 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms