RNA–Protein interactions for RNA: ENST00000395906.7

CDRT1-204, CMT1A duplicated region transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDRT1, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-204ENST00000395906 CKAP2LQ8IYA6 745 aa11.15□□□□□ -0.63
CDRT1-204ENST00000395906 SYTL4Q96C24 671 aaPredicted RBP11.15□□□□□ -0.63
CDRT1-204ENST00000395906 OSBPL5Q9H0X9 879 aaPredicted RBP11.15□□□□□ -0.63
CDRT1-204ENST00000395906 PARP3Q9Y6F1 533 aa11.15□□□□□ -0.63
CDRT1-204ENST00000395906 NSD2O96028 1365 aa11.14□□□□□ -0.63
CDRT1-204ENST00000395906 MAP2P11137 1827 aaKnown RBP11.14□□□□□ -0.63
CDRT1-204ENST00000395906 SHPRHQ149N8 1683 aa11.14□□□□□ -0.63
CDRT1-204ENST00000395906 NRDCO43847 1150 aa11.14□□□□□ -0.63
CDRT1-204ENST00000395906 N4BP1O75113 896 aaKnown RBP11.14□□□□□ -0.63
CDRT1-204ENST00000395906 SETSIPP0DME0 302 aa11.14□□□□□ -0.63
CDRT1-204ENST00000395906 EXOSC9Q06265 439 aaKnown RBP11.14□□□□□ -0.63
CDRT1-204ENST00000395906 GOLGA1Q92805 767 aa11.14□□□□□ -0.63
CDRT1-204ENST00000395906 KIF9Q9HAQ2 790 aa11.14□□□□□ -0.63
CDRT1-204ENST00000395906 GNAI3P08754 354 aa11.14□□□□□ -0.63
CDRT1-204ENST00000395906 CEP112Q8N8E3 955 aa11.14□□□□□ -0.63
CDRT1-204ENST00000395906 CCDC150Q8NCX0 1101 aa11.14□□□□□ -0.63
CDRT1-204ENST00000395906 CABLES1Q8TDN4 633 aa11.14□□□□□ -0.63
CDRT1-204ENST00000395906 XAGE2Q96GT9 111 aa11.14□□□□□ -0.63
CDRT1-204ENST00000395906 DNAJC25Q9H1X3 360 aa11.14□□□□□ -0.63
CDRT1-204ENST00000395906 ADGRB2O60241 1585 aa11.14□□□□□ -0.63
CDRT1-204ENST00000395906 ZBTB7BO15156 539 aaPredicted RBP11.13□□□□□ -0.63
CDRT1-204ENST00000395906 MAGEA8P43361 318 aa11.13□□□□□ -0.63
CDRT1-204ENST00000395906 SETDB1Q15047 1291 aa11.13□□□□□ -0.63
CDRT1-204ENST00000395906 BEND6Q5SZJ8 279 aaPredicted RBP11.13□□□□□ -0.63
CDRT1-204ENST00000395906 FAM204AQ9H8W3 233 aa11.13□□□□□ -0.63
CDRT1-204ENST00000395906 DDX19AQ9NUU7 478 aaKnown RBP11.13□□□□□ -0.63
CDRT1-204ENST00000395906 CHCHD3Q9NX63 227 aaKnown RBP11.13□□□□□ -0.63
CDRT1-204ENST00000395906 CAPN7Q9Y6W3 813 aa11.13□□□□□ -0.63
CDRT1-204ENST00000395906 ERLIN1O75477 346 aa11.13□□□□□ -0.63
CDRT1-204ENST00000395906 FAM163BP0C2L3 166 aa11.13□□□□□ -0.63
CDRT1-204ENST00000395906 SYT1P21579 422 aa11.13□□□□□ -0.63
CDRT1-204ENST00000395906 DNM1Q05193 864 aaKnown RBP11.13□□□□□ -0.63
CDRT1-204ENST00000395906 PPP2R3AQ06190 1150 aa11.13□□□□□ -0.63
CDRT1-204ENST00000395906 PARD3BQ8TEW8 1205 aa11.13□□□□□ -0.63
CDRT1-204ENST00000395906 CLIC6Q96NY7 704 aa11.13□□□□□ -0.63
CDRT1-204ENST00000395906 ATXN2Q99700 1313 aaKnown RBP11.13□□□□□ -0.63
CDRT1-204ENST00000395906 USP5P45974 858 aa11.12□□□□□ -0.63
CDRT1-204ENST00000395906 FNTAP49354 379 aa11.12□□□□□ -0.63
CDRT1-204ENST00000395906 IQCB1Q15051 598 aa11.12□□□□□ -0.63
CDRT1-204ENST00000395906 ISM2Q6H9L7 571 aa11.12□□□□□ -0.63
CDRT1-204ENST00000395906 TRIM65Q6PJ69 517 aa11.12□□□□□ -0.63
CDRT1-204ENST00000395906 KIAA1328Q86T90 577 aa11.12□□□□□ -0.63
CDRT1-204ENST00000395906 SIRT2Q8IXJ6 389 aa11.12□□□□□ -0.63
CDRT1-204ENST00000395906 AFAP1L1Q8TED9 768 aa11.12□□□□□ -0.63
CDRT1-204ENST00000395906 CLSTN2Q9H4D0 955 aa11.12□□□□□ -0.63
CDRT1-204ENST00000395906 POTEB2H3BUK9 544 aa11.12□□□□□ -0.63
CDRT1-204ENST00000395906 FSBPO95073 299 aa11.12□□□□□ -0.63
CDRT1-204ENST00000395906 ABCD1P33897 745 aa11.12□□□□□ -0.63
CDRT1-204ENST00000395906 CCT5P48643 541 aa11.12□□□□□ -0.63
CDRT1-204ENST00000395906 SLC8A3P57103 927 aa11.12□□□□□ -0.63
CDRT1-204ENST00000395906 RCSD1Q6JBY9 416 aa11.12□□□□□ -0.63
CDRT1-204ENST00000395906 TSR2Q969E8 191 aaKnown RBP11.12□□□□□ -0.63
CDRT1-204ENST00000395906 CCDC102AQ96A19 550 aa11.12□□□□□ -0.63
CDRT1-204ENST00000395906 IL17RAQ96F46 866 aa11.12□□□□□ -0.63
CDRT1-204ENST00000395906 PHACTR3Q96KR7 559 aa11.12□□□□□ -0.63
CDRT1-204ENST00000395906 HOMER3Q9NSC5 361 aa11.12□□□□□ -0.63
CDRT1-204ENST00000395906 MAP3K19Q56UN5 1328 aa11.12□□□□□ -0.63
CDRT1-204ENST00000395906 ITSN1Q15811 1721 aa11.11□□□□□ -0.63
CDRT1-204ENST00000395906 MAP3K9P80192 1104 aa11.11□□□□□ -0.63
CDRT1-204ENST00000395906 NFXL1Q6ZNB6 911 aa11.11□□□□□ -0.63
CDRT1-204ENST00000395906 KRT28Q7Z3Y7 464 aa11.11□□□□□ -0.63
CDRT1-204ENST00000395906 MKL1Q969V6 931 aa11.11□□□□□ -0.63
CDRT1-204ENST00000395906 MPHOSPH8Q99549 860 aa11.11□□□□□ -0.63
CDRT1-204ENST00000395906 CRACR2AQ9BSW2 395 aa11.11□□□□□ -0.63
CDRT1-204ENST00000395906 L1RE1Q9UN81 338 aa11.11□□□□□ -0.63
CDRT1-204ENST00000395906 AMPHP49418 695 aa11.11□□□□□ -0.63
CDRT1-204ENST00000395906 RAB27AP51159 221 aa11.11□□□□□ -0.63
CDRT1-204ENST00000395906 CDCA2Q69YH5 1023 aaPredicted RBP11.11□□□□□ -0.63
CDRT1-204ENST00000395906 DNAJC14Q6Y2X3 702 aaPredicted RBP11.11□□□□□ -0.63
CDRT1-204ENST00000395906 KDM4CQ9H3R0 1056 aa11.11□□□□□ -0.63
CDRT1-204ENST00000395906 SMC3Q9UQE7 1217 aa11.11□□□□□ -0.63
CDRT1-204ENST00000395906 SSH2Q76I76 1423 aa11.1□□□□□ -0.63
CDRT1-204ENST00000395906 SHOX2O60902 331 aaPredicted RBP11.1□□□□□ -0.63
CDRT1-204ENST00000395906 PRKAR2BP31323 418 aa11.1□□□□□ -0.63
CDRT1-204ENST00000395906 TCP11Q8WWU5 503 aa11.1□□□□□ -0.63
CDRT1-204ENST00000395906 SAAL1Q96ER3 474 aa11.1□□□□□ -0.63
CDRT1-204ENST00000395906 C1orf115Q9H7X2 142 aa11.1□□□□□ -0.63
CDRT1-204ENST00000395906 DACT1Q9NYF0 836 aa11.1□□□□□ -0.63
CDRT1-204ENST00000395906 KIF20BQ96Q89 1820 aa11.1□□□□□ -0.63
CDRT1-204ENST00000395906 MYO1FO00160 1098 aa11.1□□□□□ -0.63
CDRT1-204ENST00000395906 ZC3H6P61129 1189 aaKnown RBP11.1□□□□□ -0.63
CDRT1-204ENST00000395906 EIF4A2Q14240 407 aaKnown RBP11.1□□□□□ -0.63
CDRT1-204ENST00000395906 SF3A1Q15459 793 aaKnown RBP11.1□□□□□ -0.63
CDRT1-204ENST00000395906 RAB21Q9UL25 225 aa11.1□□□□□ -0.63
CDRT1-204ENST00000395906 MRFAP1Q9Y605 127 aa11.1□□□□□ -0.63
CDRT1-204ENST00000395906 AKAP12Q02952 1782 aa11.09□□□□□ -0.63
CDRT1-204ENST00000395906 MON2Q7Z3U7 1717 aa11.09□□□□□ -0.63
CDRT1-204ENST00000395906 FMN2Q9NZ56 1722 aa11.09□□□□□ -0.63
CDRT1-204ENST00000395906 TOPAZ1Q8N9V7 1692 aa11.09□□□□□ -0.63
CDRT1-204ENST00000395906 PES1O00541 588 aaKnown RBP11.09□□□□□ -0.63
CDRT1-204ENST00000395906 SFPQP23246 707 aaKnown RBP eCLIP11.09□□□□□ -0.63
CDRT1-204ENST00000395906 IL13P35225 146 aa11.09□□□□□ -0.63
CDRT1-204ENST00000395906 ATP2B2Q01814 1243 aa11.09□□□□□ -0.63
CDRT1-204ENST00000395906 NAA25Q14CX7 972 aa11.09□□□□□ -0.63
CDRT1-204ENST00000395906 ALDH1L2Q3SY69 923 aa11.09□□□□□ -0.63
CDRT1-204ENST00000395906 TLDC1Q6P9B6 456 aa11.09□□□□□ -0.63
CDRT1-204ENST00000395906 USHBP1Q8N6Y0 703 aa11.09□□□□□ -0.63
CDRT1-204ENST00000395906 ZBTB10Q96DT7 871 aa11.09□□□□□ -0.63
CDRT1-204ENST00000395906 TBC1D2BQ9UPU7 963 aa11.09□□□□□ -0.63
CDRT1-204ENST00000395906 C1orf167Q5SNV9 1468 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms