RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 C9orf131Q5VYM1 1079 aa7.19□□□□□ -1.26
CASC3-202ENST00000394114 PLBD2Q8NHP8 589 aa7.19□□□□□ -1.26
CASC3-202ENST00000394114 TINF2Q9BSI4 451 aa7.19□□□□□ -1.26
CASC3-202ENST00000394114 LRRCC1Q9C099 1032 aa7.19□□□□□ -1.26
CASC3-202ENST00000394114 TUT1Q9H6E5 874 aaKnown RBP7.19□□□□□ -1.26
CASC3-202ENST00000394114 TMEM134Q9H6X4 195 aa7.19□□□□□ -1.26
CASC3-202ENST00000394114 FAM198AQ9UFP1 575 aa7.19□□□□□ -1.26
CASC3-202ENST00000394114 DCTN4Q9UJW0 460 aa7.19□□□□□ -1.26
CASC3-202ENST00000394114 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.18□□□□□ -1.26
CASC3-202ENST00000394114 A0A087WZG4 1122 aa7.18□□□□□ -1.26
CASC3-202ENST00000394114 STARD3NLO95772 234 aa7.18□□□□□ -1.26
CASC3-202ENST00000394114 GSPT1P15170 499 aaKnown RBP7.18□□□□□ -1.26
CASC3-202ENST00000394114 KCNQ4P56696 695 aa7.18□□□□□ -1.26
CASC3-202ENST00000394114 EPHA10Q5JZY3 1008 aa7.18□□□□□ -1.26
CASC3-202ENST00000394114 PTF1AQ7RTS3 328 aa7.18□□□□□ -1.26
CASC3-202ENST00000394114 KLHDC4Q8TBB5 520 aa7.18□□□□□ -1.26
CASC3-202ENST00000394114 MICAL1Q8TDZ2 1067 aa7.18□□□□□ -1.26
CASC3-202ENST00000394114 SIL1Q9H173 461 aa7.18□□□□□ -1.26
CASC3-202ENST00000394114 IBTKQ9P2D0 1353 aaPredicted RBP7.18□□□□□ -1.26
CASC3-202ENST00000394114 FOSBP53539 338 aa7.18□□□□□ -1.26
CASC3-202ENST00000394114 GUCA2AQ02747 115 aa7.18□□□□□ -1.26
CASC3-202ENST00000394114 ECM1Q16610 540 aa7.18□□□□□ -1.26
CASC3-202ENST00000394114 EAPPQ56P03 285 aaPredicted RBP7.18□□□□□ -1.26
CASC3-202ENST00000394114 BMP2KLQ5H9B9 411 aa7.18□□□□□ -1.26
CASC3-202ENST00000394114 FAM174AQ8TBP5 190 aa7.18□□□□□ -1.26
CASC3-202ENST00000394114 ZBTB1Q9Y2K1 713 aa7.18□□□□□ -1.26
CASC3-202ENST00000394114 SPATA31A6Q5VVP1 1343 aa7.18□□□□□ -1.26
CASC3-202ENST00000394114 SLC4A3P48751 1232 aa7.17□□□□□ -1.26
CASC3-202ENST00000394114 RNF135Q8IUD6 432 aa7.17□□□□□ -1.26
CASC3-202ENST00000394114 ZSCAN29Q8IWY8 852 aaPredicted RBP7.17□□□□□ -1.26
CASC3-202ENST00000394114 IPO9Q96P70 1041 aaKnown RBP7.17□□□□□ -1.26
CASC3-202ENST00000394114 AFF2P51816 1311 aa7.17□□□□□ -1.26
CASC3-202ENST00000394114 ERBB4Q15303 1308 aa7.17□□□□□ -1.26
CASC3-202ENST00000394114 RAB11FIP3O75154 756 aa7.17□□□□□ -1.26
CASC3-202ENST00000394114 CYP19A1P11511 503 aaPredicted RBP7.17□□□□□ -1.26
CASC3-202ENST00000394114 ATP6V1AP38606 617 aa7.17□□□□□ -1.26
CASC3-202ENST00000394114 TTC22Q5TAA0 569 aa7.17□□□□□ -1.26
CASC3-202ENST00000394114 TAS1R3Q7RTX0 852 aa7.17□□□□□ -1.26
CASC3-202ENST00000394114 ZNF592Q92610 1267 aa7.17□□□□□ -1.26
CASC3-202ENST00000394114 CHMP3Q9Y3E7 222 aa7.17□□□□□ -1.26
CASC3-202ENST00000394114 NUP188Q5SRE5 1749 aa7.17□□□□□ -1.26
CASC3-202ENST00000394114 ABL1P00519 1130 aa7.16□□□□□ -1.26
CASC3-202ENST00000394114 FBXO45P0C2W1 286 aa7.16□□□□□ -1.26
CASC3-202ENST00000394114 GPTP24298 496 aa7.16□□□□□ -1.26
CASC3-202ENST00000394114 GCGRP47871 477 aa7.16□□□□□ -1.26
CASC3-202ENST00000394114 ZNF211Q13398 564 aaPredicted RBP7.16□□□□□ -1.26
CASC3-202ENST00000394114 EGFLAMQ63HQ2 1017 aa7.16□□□□□ -1.26
CASC3-202ENST00000394114 LARGE2Q8N3Y3 721 aa7.16□□□□□ -1.26
CASC3-202ENST00000394114 SLC43A3Q8NBI5 491 aa7.16□□□□□ -1.26
CASC3-202ENST00000394114 RDH13Q8NBN7 331 aa7.16□□□□□ -1.26
CASC3-202ENST00000394114 TEX13AQ9BXU3 409 aaPredicted RBP7.16□□□□□ -1.26
CASC3-202ENST00000394114 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.16□□□□□ -1.26
CASC3-202ENST00000394114 PDE1AP54750 535 aa7.16□□□□□ -1.26
CASC3-202ENST00000394114 KIF6Q6ZMV9 814 aa7.16□□□□□ -1.26
CASC3-202ENST00000394114 METTL16Q86W50 562 aaKnown RBP7.16□□□□□ -1.26
CASC3-202ENST00000394114 GLYCTKQ8IVS8 523 aa7.16□□□□□ -1.26
CASC3-202ENST00000394114 RHPN1Q8TCX5 695 aa7.16□□□□□ -1.26
CASC3-202ENST00000394114 HLA-CQ95604 372 aa7.16□□□□□ -1.26
CASC3-202ENST00000394114 ARMC5Q96C12 935 aa7.16□□□□□ -1.26
CASC3-202ENST00000394114 PSMD1Q99460 953 aa7.16□□□□□ -1.26
CASC3-202ENST00000394114 UPF2Q9HAU5 1272 aaKnown RBP7.16□□□□□ -1.26
CASC3-202ENST00000394114 PRKAG2Q9UGJ0 569 aa7.16□□□□□ -1.26
CASC3-202ENST00000394114 UTYO14607 1347 aa7.16□□□□□ -1.26
CASC3-202ENST00000394114 TJP1Q07157 1748 aa7.16□□□□□ -1.26
CASC3-202ENST00000394114 LOC102724428A0A0B4J2F2 783 aa7.15□□□□□ -1.26
CASC3-202ENST00000394114 MX1P20591 662 aa7.15□□□□□ -1.26
CASC3-202ENST00000394114 SIK1P57059 783 aa7.15□□□□□ -1.26
CASC3-202ENST00000394114 ITPK1Q13572 414 aa7.15□□□□□ -1.26
CASC3-202ENST00000394114 NCOA4Q13772 614 aa7.15□□□□□ -1.26
CASC3-202ENST00000394114 HLFQ16534 295 aa7.15□□□□□ -1.26
CASC3-202ENST00000394114 CCDC85AQ96PX6 553 aaPredicted RBP7.15□□□□□ -1.26
CASC3-202ENST00000394114 CWC25Q9NXE8 425 aaPredicted RBP7.15□□□□□ -1.26
CASC3-202ENST00000394114 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.15□□□□□ -1.26
CASC3-202ENST00000394114 PALLDQ8WX93 1383 aa7.15□□□□□ -1.26
CASC3-202ENST00000394114 MYH14Q7Z406 1995 aaKnown RBP7.15□□□□□ -1.26
CASC3-202ENST00000394114 MAP4K4O95819 1239 aaPredicted RBP7.15□□□□□ -1.26
CASC3-202ENST00000394114 SDSP20132 328 aa7.15□□□□□ -1.26
CASC3-202ENST00000394114 MTX1Q13505 466 aa7.15□□□□□ -1.26
CASC3-202ENST00000394114 RGL4Q8IZJ4 473 aa7.15□□□□□ -1.26
CASC3-202ENST00000394114 ZDHHC16Q969W1 377 aa7.15□□□□□ -1.26
CASC3-202ENST00000394114 GPATCH3Q96I76 525 aa7.15□□□□□ -1.26
CASC3-202ENST00000394114 C21orf2O43822 256 aa7.14□□□□□ -1.27
CASC3-202ENST00000394114 DPYDQ12882 1025 aa7.14□□□□□ -1.27
CASC3-202ENST00000394114 CCDC144BQ3MJ40 725 aa7.14□□□□□ -1.27
CASC3-202ENST00000394114 LMBR1LQ6UX01 489 aa7.14□□□□□ -1.27
CASC3-202ENST00000394114 SMIM5Q71RC9 77 aa7.14□□□□□ -1.27
CASC3-202ENST00000394114 SYNE4Q8N205 404 aa7.14□□□□□ -1.27
CASC3-202ENST00000394114 KIF1BPQ96EK5 621 aa7.14□□□□□ -1.27
CASC3-202ENST00000394114 HDAC5Q9UQL6 1122 aa7.14□□□□□ -1.27
CASC3-202ENST00000394114 FAM177BA6PVY3 158 aa7.14□□□□□ -1.27
CASC3-202ENST00000394114 TRIM6-TRIM34B2RNG4 842 aa7.14□□□□□ -1.27
CASC3-202ENST00000394114 CDC45O75419 566 aa7.14□□□□□ -1.27
CASC3-202ENST00000394114 CRKLP46109 303 aaKnown RBP7.14□□□□□ -1.27
CASC3-202ENST00000394114 NT5DC4Q86YG4 428 aa7.14□□□□□ -1.27
CASC3-202ENST00000394114 DHX38Q92620 1227 aaKnown RBP7.14□□□□□ -1.27
CASC3-202ENST00000394114 FAM89AQ96GI7 184 aa7.14□□□□□ -1.27
CASC3-202ENST00000394114 NOP58Q9Y2X3 529 aaKnown RBP7.14□□□□□ -1.27
CASC3-202ENST00000394114 PPME1Q9Y570 386 aa7.14□□□□□ -1.27
CASC3-202ENST00000394114 MAP3K15Q6ZN16 1313 aa7.14□□□□□ -1.27
CASC3-202ENST00000394114 SALL3Q9BXA9 1300 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms