RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 TTC37Q6PGP7 1564 aa22.38■■□□□ 1.17
SHANK1-203ENST00000391813 BLMP54132 1417 aaPredicted RBP22.38■■□□□ 1.17
SHANK1-203ENST00000391813 ATP2B2Q01814 1243 aa22.38■■□□□ 1.17
SHANK1-203ENST00000391813 CCDC152Q4G0S7 254 aa22.38■■□□□ 1.17
SHANK1-203ENST00000391813 TMEM67Q5HYA8 995 aa22.38■■□□□ 1.17
SHANK1-203ENST00000391813 CCDC82Q8N4S0 544 aa22.38■■□□□ 1.17
SHANK1-203ENST00000391813 C8orf58Q8NAV2 365 aa22.38■■□□□ 1.17
SHANK1-203ENST00000391813 RHOXF2BP0C7M4 288 aa22.37■■□□□ 1.17
SHANK1-203ENST00000391813 POTEJP0CG39 1038 aa22.37■■□□□ 1.17
SHANK1-203ENST00000391813 GAS2L3Q86XJ1 694 aa22.37■■□□□ 1.17
SHANK1-203ENST00000391813 RHOXF2Q9BQY4 288 aa22.37■■□□□ 1.17
SHANK1-203ENST00000391813 ALG1Q9BT22 464 aa22.37■■□□□ 1.17
SHANK1-203ENST00000391813 ALDH1L1O75891 902 aa22.37■■□□□ 1.17
SHANK1-203ENST00000391813 KARSQ15046 597 aaKnown RBP22.37■■□□□ 1.17
SHANK1-203ENST00000391813 MTHFSDQ2M296 383 aaKnown RBP22.37■■□□□ 1.17
SHANK1-203ENST00000391813 LDHAL6AQ6ZMR3 332 aa22.37■■□□□ 1.17
SHANK1-203ENST00000391813 MICU3Q86XE3 530 aa22.37■■□□□ 1.17
SHANK1-203ENST00000391813 LZTFL1Q9NQ48 299 aa22.37■■□□□ 1.17
SHANK1-203ENST00000391813 C6orf229H3BNL8 230 aa22.37■■□□□ 1.17
SHANK1-203ENST00000391813 NLRP5P59047 1200 aa22.37■■□□□ 1.17
SHANK1-203ENST00000391813 RSRC1Q96IZ7 334 aaKnown RBP22.37■■□□□ 1.17
SHANK1-203ENST00000391813 TMEM94Q12767 1356 aa22.37■■□□□ 1.17
SHANK1-203ENST00000391813 WDHD1O75717 1129 aaPredicted RBP22.37■■□□□ 1.17
SHANK1-203ENST00000391813 NOP2P46087 812 aaKnown RBP22.37■■□□□ 1.17
SHANK1-203ENST00000391813 CARD14Q9BXL6 1004 aa22.37■■□□□ 1.17
SHANK1-203ENST00000391813 LDHCP07864 332 aa22.36■■□□□ 1.17
SHANK1-203ENST00000391813 ZFYP08048 801 aaPredicted RBP22.36■■□□□ 1.17
SHANK1-203ENST00000391813 C6orf163Q5TEZ5 329 aa22.36■■□□□ 1.17
SHANK1-203ENST00000391813 NYXQ9GZU5 481 aa22.36■■□□□ 1.17
SHANK1-203ENST00000391813 CATIPQ7Z7H3 387 aa22.36■■□□□ 1.17
SHANK1-203ENST00000391813 STMN4Q9H169 189 aaPredicted RBP22.36■■□□□ 1.17
SHANK1-203ENST00000391813 PREX2Q70Z35 1606 aa22.36■■□□□ 1.17
SHANK1-203ENST00000391813 ATP2C2O75185 946 aa22.36■■□□□ 1.17
SHANK1-203ENST00000391813 RRAGBQ5VZM2 374 aa22.36■■□□□ 1.17
SHANK1-203ENST00000391813 CREB3L3Q68CJ9 461 aa22.36■■□□□ 1.17
SHANK1-203ENST00000391813 CARD6Q9BX69 1037 aa22.36■■□□□ 1.17
SHANK1-203ENST00000391813 BABAM1Q9NWV8 329 aa22.36■■□□□ 1.17
SHANK1-203ENST00000391813 UGGT1Q9NYU2 1555 aa22.36■■□□□ 1.17
SHANK1-203ENST00000391813 MCMDC2Q4G0Z9 681 aa22.35■■□□□ 1.17
SHANK1-203ENST00000391813 CCDC129Q6ZRS4 1044 aa22.35■■□□□ 1.17
SHANK1-203ENST00000391813 NLRP3Q96P20 1036 aa22.35■■□□□ 1.17
SHANK1-203ENST00000391813 UBE3BQ7Z3V4 1068 aa22.35■■□□□ 1.17
SHANK1-203ENST00000391813 DZIP1Q86YF9 867 aaKnown RBP22.35■■□□□ 1.17
SHANK1-203ENST00000391813 POLD1P28340 1107 aa22.35■■□□□ 1.17
SHANK1-203ENST00000391813 CHMP4BP1P59074 171 aa22.35■■□□□ 1.17
SHANK1-203ENST00000391813 SELENOOQ9BVL4 669 aa22.35■■□□□ 1.17
SHANK1-203ENST00000391813 TTF1Q15361 905 aaPredicted RBP22.35■■□□□ 1.17
SHANK1-203ENST00000391813 CCDC40Q4G0X9 1142 aa22.35■■□□□ 1.17
SHANK1-203ENST00000391813 SLC26A6Q9BXS9 759 aa22.34■■□□□ 1.17
SHANK1-203ENST00000391813 ZSCAN26Q16670 478 aa22.34■■□□□ 1.17
SHANK1-203ENST00000391813 DDX12PQ92771 950 aa22.34■■□□□ 1.17
SHANK1-203ENST00000391813 KIAA0753Q2KHM9 967 aa22.34■■□□□ 1.17
SHANK1-203ENST00000391813 FBF1Q8TES7 1133 aa22.34■■□□□ 1.17
SHANK1-203ENST00000391813 XAGE3Q8WTP9 111 aa22.34■■□□□ 1.17
SHANK1-203ENST00000391813 SEC63Q9UGP8 760 aaKnown RBP22.34■■□□□ 1.17
SHANK1-203ENST00000391813 MINDY4BA8MYZ0 360 aa22.34■■□□□ 1.17
SHANK1-203ENST00000391813 PSMA7O14818 248 aa22.34■■□□□ 1.17
SHANK1-203ENST00000391813 ARHGAP6O43182 974 aa22.34■■□□□ 1.17
SHANK1-203ENST00000391813 NFATC2IPQ8NCF5 419 aa22.34■■□□□ 1.17
SHANK1-203ENST00000391813 CALML4Q96GE6 196 aa22.34■■□□□ 1.17
SHANK1-203ENST00000391813 LRRC27Q9C0I9 530 aa22.34■■□□□ 1.17
SHANK1-203ENST00000391813 ZEB2O60315 1214 aa22.33■■□□□ 1.17
SHANK1-203ENST00000391813 TSPOAP1O95153 1857 aa22.33■■□□□ 1.17
SHANK1-203ENST00000391813 ELP1O95163 1332 aa22.33■■□□□ 1.17
SHANK1-203ENST00000391813 INPP5BP32019 993 aa22.33■■□□□ 1.17
SHANK1-203ENST00000391813 SLC39A6Q13433 755 aa22.33■■□□□ 1.17
SHANK1-203ENST00000391813 HSP90AA4PQ58FG1 418 aa22.33■■□□□ 1.17
SHANK1-203ENST00000391813 AKR1B15C9JRZ8 316 aaPredicted RBP22.33■■□□□ 1.16
SHANK1-203ENST00000391813 ATP5J2-PTCD1G3V325 749 aa22.33■■□□□ 1.16
SHANK1-203ENST00000391813 COPS6Q7L5N1 327 aa22.33■■□□□ 1.16
SHANK1-203ENST00000391813 ZBTB43O43298 467 aa22.33■■□□□ 1.16
SHANK1-203ENST00000391813 MARCKSP29966 332 aaPredicted RBP22.32■■□□□ 1.16
SHANK1-203ENST00000391813 CFAP58Q5T655 872 aa22.32■■□□□ 1.16
SHANK1-203ENST00000391813 ERCC6L2Q5T890 1561 aa22.32■■□□□ 1.16
SHANK1-203ENST00000391813 KSR2Q6VAB6 950 aa22.32■■□□□ 1.16
SHANK1-203ENST00000391813 TPTE2Q6XPS3 522 aa22.32■■□□□ 1.16
SHANK1-203ENST00000391813 ZNF622Q969S3 477 aaKnown RBP eCLIP22.32■■□□□ 1.16
SHANK1-203ENST00000391813 TFCP2L1Q9NZI6 479 aa22.32■■□□□ 1.16
SHANK1-203ENST00000391813 FBXO3Q9UK99 471 aa22.32■■□□□ 1.16
SHANK1-203ENST00000391813 MYO1BO43795 1136 aa22.32■■□□□ 1.16
SHANK1-203ENST00000391813 OAS2P29728 719 aaKnown RBP22.32■■□□□ 1.16
SHANK1-203ENST00000391813 CPLX4Q7Z7G2 160 aa22.32■■□□□ 1.16
SHANK1-203ENST00000391813 TMTC2Q8N394 836 aa22.32■■□□□ 1.16
SHANK1-203ENST00000391813 TTF2Q9UNY4 1162 aaKnown RBP22.32■■□□□ 1.16
SHANK1-203ENST00000391813 CCDC42Q96M95 316 aa22.31■■□□□ 1.16
SHANK1-203ENST00000391813 GUCA1BQ9UMX6 200 aa22.31■■□□□ 1.16
SHANK1-203ENST00000391813 SBNO2Q9Y2G9 1366 aa22.31■■□□□ 1.16
SHANK1-203ENST00000391813 RNMTO43148 476 aaKnown RBP22.31■■□□□ 1.16
SHANK1-203ENST00000391813 TTC14Q96N46 770 aa22.31■■□□□ 1.16
SHANK1-203ENST00000391813 ERVK-7P63135 1459 aa22.31■■□□□ 1.16
SHANK1-203ENST00000391813 AOX1Q06278 1338 aa22.31■■□□□ 1.16
SHANK1-203ENST00000391813 UBE4AQ14139 1066 aa22.31■■□□□ 1.16
SHANK1-203ENST00000391813 USP21Q9UK80 565 aa22.31■■□□□ 1.16
SHANK1-203ENST00000391813 NDUFAB1O14561 156 aa22.31■■□□□ 1.16
SHANK1-203ENST00000391813 NBPF7P0C2Y1 421 aaPredicted RBP22.31■■□□□ 1.16
SHANK1-203ENST00000391813 SPTY2D1Q68D10 685 aaPredicted RBP22.31■■□□□ 1.16
SHANK1-203ENST00000391813 HOOK3Q86VS8 718 aa22.31■■□□□ 1.16
SHANK1-203ENST00000391813 LRRC2Q9BYS8 371 aa22.31■■□□□ 1.16
SHANK1-203ENST00000391813 PTPDC1A2A3K4 754 aa22.3■■□□□ 1.16
SHANK1-203ENST00000391813 USP5P45974 858 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms