RNA–Protein interactions for RNA: ENST00000390392.3

TRBV4-2-201, Transcript of T cell receptor beta variable 4-2, humanhuman

APPRIS P1 BASIC

Gene TRBV4-2, Length 455 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-2-201ENST00000390392 USP44Q9H0E7 712 aa17.08■□□□□ 0.32
TRBV4-2-201ENST00000390392 BICC1Q9H694 974 aaKnown RBP17.08■□□□□ 0.32
TRBV4-2-201ENST00000390392 SAGE1Q9NXZ1 904 aa17.08■□□□□ 0.32
TRBV4-2-201ENST00000390392 FAM205AQ6ZU69 1335 aa17.07■□□□□ 0.32
TRBV4-2-201ENST00000390392 SLC10A3P09131 477 aa17.07■□□□□ 0.32
TRBV4-2-201ENST00000390392 CDCA7LQ96GN5 454 aa17.07■□□□□ 0.32
TRBV4-2-201ENST00000390392 SMC4Q9NTJ3 1288 aa17.07■□□□□ 0.32
TRBV4-2-201ENST00000390392 PPP2R3BQ9Y5P8 575 aa17.07■□□□□ 0.32
TRBV4-2-201ENST00000390392 PAPPA2Q9BXP8 1791 aa17.07■□□□□ 0.32
TRBV4-2-201ENST00000390392 AKAP11Q9UKA4 1901 aa17.06■□□□□ 0.32
TRBV4-2-201ENST00000390392 SNAP23O00161 211 aa17.06■□□□□ 0.32
TRBV4-2-201ENST00000390392 KIF23Q02241 960 aaPredicted RBP17.06■□□□□ 0.32
TRBV4-2-201ENST00000390392 CAVIN4Q5BKX8 364 aa17.06■□□□□ 0.32
TRBV4-2-201ENST00000390392 ARMC9Q7Z3E5 817 aa17.06■□□□□ 0.32
TRBV4-2-201ENST00000390392 API5Q9BZZ5 524 aaKnown RBP17.06■□□□□ 0.32
TRBV4-2-201ENST00000390392 FBXO3Q9UK99 471 aa17.06■□□□□ 0.32
TRBV4-2-201ENST00000390392 COL1A1P02452 1464 aaPredicted RBP17.05■□□□□ 0.32
TRBV4-2-201ENST00000390392 UNCXA6NJT0 531 aa17.05■□□□□ 0.32
TRBV4-2-201ENST00000390392 PDE8BO95263 885 aa17.05■□□□□ 0.32
TRBV4-2-201ENST00000390392 VPS37DQ86XT2 251 aa17.05■□□□□ 0.32
TRBV4-2-201ENST00000390392 ARHGAP45Q92619 1136 aa17.05■□□□□ 0.32
TRBV4-2-201ENST00000390392 FAM84BQ96KN1 310 aaPredicted RBP17.05■□□□□ 0.32
TRBV4-2-201ENST00000390392 CAPN15O75808 1086 aa17.04■□□□□ 0.32
TRBV4-2-201ENST00000390392 CERS5Q8N5B7 392 aa17.04■□□□□ 0.32
TRBV4-2-201ENST00000390392 ANKRD44Q8N8A2 993 aa17.04■□□□□ 0.32
TRBV4-2-201ENST00000390392 PUS3Q9BZE2 481 aaKnown RBP17.04■□□□□ 0.32
TRBV4-2-201ENST00000390392 ECM29Q5VYK3 1845 aa17.04■□□□□ 0.32
TRBV4-2-201ENST00000390392 KIF16BQ96L93 1317 aa17.03■□□□□ 0.32
TRBV4-2-201ENST00000390392 TTLL12Q14166 644 aaPredicted RBP17.03■□□□□ 0.32
TRBV4-2-201ENST00000390392 SUPT20HL1Q3ZLR7 823 aa17.03■□□□□ 0.32
TRBV4-2-201ENST00000390392 CFAP100Q494V2 611 aa17.03■□□□□ 0.32
TRBV4-2-201ENST00000390392 METTL24Q5JXM2 366 aa17.03■□□□□ 0.32
TRBV4-2-201ENST00000390392 FBXO33Q7Z6M2 555 aa17.03■□□□□ 0.32
TRBV4-2-201ENST00000390392 TBC1D22AQ8WUA7 517 aa17.03■□□□□ 0.32
TRBV4-2-201ENST00000390392 CSRNP1Q96S65 589 aa17.03■□□□□ 0.32
TRBV4-2-201ENST00000390392 MRIQ9BWK5 157 aa17.03■□□□□ 0.32
TRBV4-2-201ENST00000390392 DEFB129Q9H1M3 183 aa17.03■□□□□ 0.32
TRBV4-2-201ENST00000390392 SERPINA10Q9UK55 444 aa17.03■□□□□ 0.32
TRBV4-2-201ENST00000390392 PPP1R12BO60237 982 aaPredicted RBP17.02■□□□□ 0.32
TRBV4-2-201ENST00000390392 GYG1P46976 350 aa17.02■□□□□ 0.32
TRBV4-2-201ENST00000390392 TNFAIP1Q13829 316 aa17.02■□□□□ 0.32
TRBV4-2-201ENST00000390392 MFSD14BQ5SR56 506 aa17.02■□□□□ 0.32
TRBV4-2-201ENST00000390392 RASAL3Q86YV0 1011 aa17.02■□□□□ 0.32
TRBV4-2-201ENST00000390392 ZIC5Q96T25 663 aa17.02■□□□□ 0.32
TRBV4-2-201ENST00000390392 NOB1Q9ULX3 412 aaKnown RBP17.02■□□□□ 0.32
TRBV4-2-201ENST00000390392 SPDYE2BA6NHP3 402 aa17.01■□□□□ 0.31
TRBV4-2-201ENST00000390392 UBE2Q2LH0YL09 131 aa17.01■□□□□ 0.31
TRBV4-2-201ENST00000390392 FRAT2O75474 233 aaPredicted RBP17.01■□□□□ 0.31
TRBV4-2-201ENST00000390392 IFIT1P09914 478 aaKnown RBP17.01■□□□□ 0.31
TRBV4-2-201ENST00000390392 UBTFL1P0CB47 393 aaPredicted RBP17.01■□□□□ 0.31
TRBV4-2-201ENST00000390392 SPDYE6P0CI01 402 aa17.01■□□□□ 0.31
TRBV4-2-201ENST00000390392 RBM5P52756 815 aaKnown RBP eCLIP17.01■□□□□ 0.31
TRBV4-2-201ENST00000390392 HDLBPQ00341 1268 aaKnown RBP17.01■□□□□ 0.31
TRBV4-2-201ENST00000390392 LRRC24Q50LG9 513 aa17.01■□□□□ 0.31
TRBV4-2-201ENST00000390392 PRMT6Q96LA8 375 aaPredicted RBP17.01■□□□□ 0.31
TRBV4-2-201ENST00000390392 RNF186Q9NXI6 227 aa17.01■□□□□ 0.31
TRBV4-2-201ENST00000390392 SUGT1Q9Y2Z0 365 aa17.01■□□□□ 0.31
TRBV4-2-201ENST00000390392 F8W031 263 aaPredicted RBP17■□□□□ 0.31
TRBV4-2-201ENST00000390392 EYA2O00167 538 aa17■□□□□ 0.31
TRBV4-2-201ENST00000390392 IPO8O15397 1037 aaKnown RBP17■□□□□ 0.31
TRBV4-2-201ENST00000390392 TM4SF4P48230 202 aa17■□□□□ 0.31
TRBV4-2-201ENST00000390392 INHBEP58166 350 aa17■□□□□ 0.31
TRBV4-2-201ENST00000390392 MAP3K11Q16584 847 aa17■□□□□ 0.31
TRBV4-2-201ENST00000390392 PRAMEF18Q5VWM3 479 aa17■□□□□ 0.31
TRBV4-2-201ENST00000390392 VGLL2Q8N8G2 317 aa17■□□□□ 0.31
TRBV4-2-201ENST00000390392 ABHD8Q96I13 439 aa17■□□□□ 0.31
TRBV4-2-201ENST00000390392 TTF2Q9UNY4 1162 aaKnown RBP17■□□□□ 0.31
TRBV4-2-201ENST00000390392 CASP8AP2Q9UKL3 1982 aa16.99■□□□□ 0.31
TRBV4-2-201ENST00000390392 TRPA1O75762 1119 aa16.99■□□□□ 0.31
TRBV4-2-201ENST00000390392 RARSP54136 660 aaKnown RBP16.99■□□□□ 0.31
TRBV4-2-201ENST00000390392 PUM3Q15397 648 aaKnown RBP16.99■□□□□ 0.31
TRBV4-2-201ENST00000390392 LDLRAD1Q5T700 205 aa16.99■□□□□ 0.31
TRBV4-2-201ENST00000390392 LPIN2Q92539 896 aa16.99■□□□□ 0.31
TRBV4-2-201ENST00000390392 TSKSQ9UJT2 592 aa16.99■□□□□ 0.31
TRBV4-2-201ENST00000390392 SCAF8Q9UPN6 1271 aaKnown RBP16.99■□□□□ 0.31
TRBV4-2-201ENST00000390392 CIAO1O76071 339 aa16.98■□□□□ 0.31
TRBV4-2-201ENST00000390392 FGFR2P21802 821 aa16.98■□□□□ 0.31
TRBV4-2-201ENST00000390392 RFX5P48382 616 aaPredicted RBP16.98■□□□□ 0.31
TRBV4-2-201ENST00000390392 PTPN12Q05209 780 aaKnown RBP16.98■□□□□ 0.31
TRBV4-2-201ENST00000390392 SREBF2Q12772 1141 aa16.98■□□□□ 0.31
TRBV4-2-201ENST00000390392 SLC5A1P13866 664 aa16.97■□□□□ 0.31
TRBV4-2-201ENST00000390392 TNNI2P48788 182 aa16.97■□□□□ 0.31
TRBV4-2-201ENST00000390392 INTS3Q68E01 1043 aaKnown RBP16.97■□□□□ 0.31
TRBV4-2-201ENST00000390392 MOB2Q70IA6 237 aa16.97■□□□□ 0.31
TRBV4-2-201ENST00000390392 SLC10A4Q96EP9 437 aa16.97■□□□□ 0.31
TRBV4-2-201ENST00000390392 ANGEL1Q9UNK9 670 aaKnown RBP16.97■□□□□ 0.31
TRBV4-2-201ENST00000390392 MAST3O60307 1309 aa16.96■□□□□ 0.31
TRBV4-2-201ENST00000390392 ZBTB22O15209 634 aa16.96■□□□□ 0.31
TRBV4-2-201ENST00000390392 GNAI3P08754 354 aa16.96■□□□□ 0.31
TRBV4-2-201ENST00000390392 SPDYE2Q495Y8 402 aa16.96■□□□□ 0.31
TRBV4-2-201ENST00000390392 NOM1Q5C9Z4 860 aaKnown RBP16.96■□□□□ 0.31
TRBV4-2-201ENST00000390392 DZIP1LQ8IYY4 767 aaKnown RBP16.96■□□□□ 0.31
TRBV4-2-201ENST00000390392 VEZTQ9HBM0 779 aa16.96■□□□□ 0.31
TRBV4-2-201ENST00000390392 CEP126Q9P2H0 1117 aa16.96■□□□□ 0.31
TRBV4-2-201ENST00000390392 ALDH1A1P00352 501 aa16.95■□□□□ 0.3
TRBV4-2-201ENST00000390392 ZBTB48P10074 688 aaPredicted RBP16.95■□□□□ 0.3
TRBV4-2-201ENST00000390392 IL15P40933 162 aaPredicted RBP16.95■□□□□ 0.3
TRBV4-2-201ENST00000390392 CRKP46108 304 aa16.95■□□□□ 0.3
TRBV4-2-201ENST00000390392 IREB2P48200 963 aaKnown RBP16.95■□□□□ 0.3
TRBV4-2-201ENST00000390392 RASA3Q14644 834 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms