RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 PUM3Q15397 648 aaKnown RBP14.42□□□□□ -0.1
SMARCE1-203ENST00000377808 TMEM57Q8N5G2 664 aa14.42□□□□□ -0.1
SMARCE1-203ENST00000377808 IQSEC3Q9UPP2 1182 aaPredicted RBP14.42□□□□□ -0.1
SMARCE1-203ENST00000377808 NBPF9Q3BBW0 867 aa14.41□□□□□ -0.1
SMARCE1-203ENST00000377808 CYP4F22Q6NT55 531 aa14.41□□□□□ -0.1
SMARCE1-203ENST00000377808 FAM84BQ96KN1 310 aaPredicted RBP14.41□□□□□ -0.1
SMARCE1-203ENST00000377808 PA2G4Q9UQ80 394 aaKnown RBP14.41□□□□□ -0.1
SMARCE1-203ENST00000377808 TLL2Q9Y6L7 1015 aa14.41□□□□□ -0.1
SMARCE1-203ENST00000377808 ZNF646O15015 1829 aaPredicted RBP14.41□□□□□ -0.1
SMARCE1-203ENST00000377808 WDR33Q9C0J8 1336 aaKnown RBP14.41□□□□□ -0.1
SMARCE1-203ENST00000377808 SRGAP3O43295 1099 aa14.41□□□□□ -0.1
SMARCE1-203ENST00000377808 GNAI2P04899 355 aa14.41□□□□□ -0.1
SMARCE1-203ENST00000377808 SLC5A1P13866 664 aa14.41□□□□□ -0.1
SMARCE1-203ENST00000377808 ECE1P42892 770 aa14.41□□□□□ -0.1
SMARCE1-203ENST00000377808 RBM5P52756 815 aaKnown RBP eCLIP14.41□□□□□ -0.1
SMARCE1-203ENST00000377808 ITPRIPQ8IWB1 547 aa14.41□□□□□ -0.1
SMARCE1-203ENST00000377808 CERS5Q8N5B7 392 aa14.41□□□□□ -0.1
SMARCE1-203ENST00000377808 VGLL2Q8N8G2 317 aa14.41□□□□□ -0.1
SMARCE1-203ENST00000377808 CDCA5Q96FF9 252 aa14.41□□□□□ -0.1
SMARCE1-203ENST00000377808 CAPNS2Q96L46 248 aa14.41□□□□□ -0.1
SMARCE1-203ENST00000377808 WNT10BO00744 389 aa14.4□□□□□ -0.1
SMARCE1-203ENST00000377808 BCAMP50895 628 aa14.4□□□□□ -0.1
SMARCE1-203ENST00000377808 DLGAP5Q15398 846 aa14.4□□□□□ -0.1
SMARCE1-203ENST00000377808 MFSD14BQ5SR56 506 aa14.4□□□□□ -0.1
SMARCE1-203ENST00000377808 SAPCD2Q86UD0 394 aa14.4□□□□□ -0.1
SMARCE1-203ENST00000377808 C2orf69Q8N8R5 385 aa14.4□□□□□ -0.1
SMARCE1-203ENST00000377808 TDRD7Q8NHU6 1098 aaKnown RBP14.4□□□□□ -0.1
SMARCE1-203ENST00000377808 AIDAQ96BJ3 306 aa14.4□□□□□ -0.1
SMARCE1-203ENST00000377808 GBA2Q9HCG7 927 aaPredicted RBP14.4□□□□□ -0.1
SMARCE1-203ENST00000377808 CEP126Q9P2H0 1117 aa14.4□□□□□ -0.1
SMARCE1-203ENST00000377808 PCNTO95613 3336 aa14.39□□□□□ -0.11
SMARCE1-203ENST00000377808 POLR2AP24928 1970 aaKnown RBP14.39□□□□□ -0.11
SMARCE1-203ENST00000377808 CIAO1O76071 339 aa14.39□□□□□ -0.11
SMARCE1-203ENST00000377808 MMP14P50281 582 aa14.39□□□□□ -0.11
SMARCE1-203ENST00000377808 HUNKP57058 714 aa14.39□□□□□ -0.11
SMARCE1-203ENST00000377808 CFAP100Q494V2 611 aa14.39□□□□□ -0.11
SMARCE1-203ENST00000377808 ATG9AQ7Z3C6 839 aa14.39□□□□□ -0.11
SMARCE1-203ENST00000377808 DZIP1LQ8IYY4 767 aaKnown RBP14.39□□□□□ -0.11
SMARCE1-203ENST00000377808 LPIN2Q92539 896 aa14.39□□□□□ -0.11
SMARCE1-203ENST00000377808 PITPNM2Q9BZ72 1349 aa14.38□□□□□ -0.11
SMARCE1-203ENST00000377808 IL15P40933 162 aaPredicted RBP14.38□□□□□ -0.11
SMARCE1-203ENST00000377808 FKBP1AP62942 108 aaKnown RBP14.38□□□□□ -0.11
SMARCE1-203ENST00000377808 ATP2B3Q16720 1220 aa14.38□□□□□ -0.11
SMARCE1-203ENST00000377808 PRAMEF18Q5VWM3 479 aa14.38□□□□□ -0.11
SMARCE1-203ENST00000377808 FBXO33Q7Z6M2 555 aa14.38□□□□□ -0.11
SMARCE1-203ENST00000377808 FBXO3Q9UK99 471 aa14.38□□□□□ -0.11
SMARCE1-203ENST00000377808 TTF2Q9UNY4 1162 aaKnown RBP14.38□□□□□ -0.11
SMARCE1-203ENST00000377808 PCDHAC2Q9Y5I4 1007 aa14.38□□□□□ -0.11
SMARCE1-203ENST00000377808 FAM205AQ6ZU69 1335 aa14.37□□□□□ -0.11
SMARCE1-203ENST00000377808 CLRN2A0PK11 232 aa14.37□□□□□ -0.11
SMARCE1-203ENST00000377808 MYO1BO43795 1136 aa14.37□□□□□ -0.11
SMARCE1-203ENST00000377808 AOC2O75106 756 aa14.37□□□□□ -0.11
SMARCE1-203ENST00000377808 FGFR2P21802 821 aa14.37□□□□□ -0.11
SMARCE1-203ENST00000377808 TTLL12Q14166 644 aaPredicted RBP14.37□□□□□ -0.11
SMARCE1-203ENST00000377808 APOBEC3FQ8IUX4 373 aaKnown RBP14.37□□□□□ -0.11
SMARCE1-203ENST00000377808 C1orf115Q9H7X2 142 aa14.37□□□□□ -0.11
SMARCE1-203ENST00000377808 VEZTQ9HBM0 779 aa14.37□□□□□ -0.11
SMARCE1-203ENST00000377808 COPRSQ9NQ92 184 aa14.37□□□□□ -0.11
SMARCE1-203ENST00000377808 TBC1D22AQ8WUA7 517 aa14.36□□□□□ -0.11
SMARCE1-203ENST00000377808 RLBP1P12271 317 aa14.35□□□□□ -0.11
SMARCE1-203ENST00000377808 NF2P35240 595 aa14.35□□□□□ -0.11
SMARCE1-203ENST00000377808 PANK1Q8TE04 598 aa14.35□□□□□ -0.11
SMARCE1-203ENST00000377808 BEGAINQ9BUH8 593 aa14.35□□□□□ -0.11
SMARCE1-203ENST00000377808 GNL3LQ9NVN8 582 aaKnown RBP14.35□□□□□ -0.11
SMARCE1-203ENST00000377808 PNMA6EA0A0J9YXQ4 647 aa14.34□□□□□ -0.11
SMARCE1-203ENST00000377808 SPDYE2BA6NHP3 402 aa14.34□□□□□ -0.11
SMARCE1-203ENST00000377808 SPDYE6P0CI01 402 aa14.34□□□□□ -0.11
SMARCE1-203ENST00000377808 ZNF157P51786 506 aaPredicted RBP14.34□□□□□ -0.11
SMARCE1-203ENST00000377808 MAP2K1Q02750 393 aaPredicted RBP14.34□□□□□ -0.11
SMARCE1-203ENST00000377808 TFCP2Q12800 502 aa14.34□□□□□ -0.11
SMARCE1-203ENST00000377808 G3BP1Q13283 466 aaKnown RBP eCLIP14.34□□□□□ -0.11
SMARCE1-203ENST00000377808 OS9Q13438 667 aaPredicted RBP14.34□□□□□ -0.11
SMARCE1-203ENST00000377808 MTX1Q13505 466 aa14.34□□□□□ -0.11
SMARCE1-203ENST00000377808 PRKG1Q13976 671 aa14.34□□□□□ -0.11
SMARCE1-203ENST00000377808 RGMBQ6NW40 437 aa14.34□□□□□ -0.11
SMARCE1-203ENST00000377808 HHIPL1Q96JK4 782 aa14.34□□□□□ -0.11
SMARCE1-203ENST00000377808 ARAP2Q8WZ64 1704 aa14.33□□□□□ -0.12
SMARCE1-203ENST00000377808 FOXN1O15353 648 aa14.33□□□□□ -0.12
SMARCE1-203ENST00000377808 ADORA1P30542 326 aa14.33□□□□□ -0.12
SMARCE1-203ENST00000377808 CRKP46108 304 aa14.33□□□□□ -0.12
SMARCE1-203ENST00000377808 GRIK5Q16478 980 aa14.33□□□□□ -0.12
SMARCE1-203ENST00000377808 MOB2Q70IA6 237 aa14.33□□□□□ -0.12
SMARCE1-203ENST00000377808 MTMR14Q8NCE2 650 aa14.33□□□□□ -0.12
SMARCE1-203ENST00000377808 ZBED3Q96IU2 234 aaPredicted RBP14.33□□□□□ -0.12
SMARCE1-203ENST00000377808 PRMT6Q96LA8 375 aaPredicted RBP14.33□□□□□ -0.12
SMARCE1-203ENST00000377808 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.33□□□□□ -0.12
SMARCE1-203ENST00000377808 TIMM10P62072 90 aa14.32□□□□□ -0.12
SMARCE1-203ENST00000377808 NEUROD6Q96NK8 337 aa14.32□□□□□ -0.12
SMARCE1-203ENST00000377808 DEFB129Q9H1M3 183 aa14.32□□□□□ -0.12
SMARCE1-203ENST00000377808 WBP1LQ9NX94 342 aa14.32□□□□□ -0.12
SMARCE1-203ENST00000377808 SERPINA10Q9UK55 444 aa14.32□□□□□ -0.12
SMARCE1-203ENST00000377808 RCAN3Q9UKA8 241 aa14.32□□□□□ -0.12
SMARCE1-203ENST00000377808 AKAP2Q9Y2D5 859 aa14.32□□□□□ -0.12
SMARCE1-203ENST00000377808 MYH13Q9UKX3 1938 aa14.31□□□□□ -0.12
SMARCE1-203ENST00000377808 A0A1B0GUL7 405 aa14.31□□□□□ -0.12
SMARCE1-203ENST00000377808 UBE2Q2LH0YL09 131 aa14.31□□□□□ -0.12
SMARCE1-203ENST00000377808 MS4A1P11836 297 aa14.31□□□□□ -0.12
SMARCE1-203ENST00000377808 MAP2K2P36507 400 aa14.31□□□□□ -0.12
SMARCE1-203ENST00000377808 PHKA1P46020 1223 aa14.31□□□□□ -0.12
SMARCE1-203ENST00000377808 CTCFP49711 727 aaPredicted RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms