RNA–Protein interactions for RNA: ENST00000375640.7

C6orf48-205, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C6orf48, Length 1,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-205ENST00000375640 SPEF2Q9C093 1822 aa24.93■■□□□ 1.58
C6orf48-205ENST00000375640 IFIT1P09914 478 aaKnown RBP24.92■■□□□ 1.58
C6orf48-205ENST00000375640 FGFR2P21802 821 aa24.92■■□□□ 1.58
C6orf48-205ENST00000375640 ECE1P42892 770 aa24.92■■□□□ 1.58
C6orf48-205ENST00000375640 COPRSQ9NQ92 184 aa24.92■■□□□ 1.58
C6orf48-205ENST00000375640 WDR33Q9C0J8 1336 aaKnown RBP24.91■■□□□ 1.58
C6orf48-205ENST00000375640 LPIN2Q92539 896 aa24.91■■□□□ 1.58
C6orf48-205ENST00000375640 ZBED3Q96IU2 234 aaPredicted RBP24.91■■□□□ 1.58
C6orf48-205ENST00000375640 CEP126Q9P2H0 1117 aa24.91■■□□□ 1.58
C6orf48-205ENST00000375640 GNAI2P04899 355 aa24.9■■□□□ 1.58
C6orf48-205ENST00000375640 IL15P40933 162 aaPredicted RBP24.9■■□□□ 1.58
C6orf48-205ENST00000375640 MTX1Q13505 466 aa24.9■■□□□ 1.58
C6orf48-205ENST00000375640 TMEM57Q8N5G2 664 aa24.9■■□□□ 1.58
C6orf48-205ENST00000375640 MTMR14Q8NCE2 650 aa24.9■■□□□ 1.58
C6orf48-205ENST00000375640 SIL1Q9H173 461 aa24.9■■□□□ 1.58
C6orf48-205ENST00000375640 HSPA1AP0DMV8 641 aaKnown RBP24.89■■□□□ 1.58
C6orf48-205ENST00000375640 HSPA1BP0DMV9 641 aaKnown RBP24.89■■□□□ 1.58
C6orf48-205ENST00000375640 DLGAP5Q15398 846 aa24.89■■□□□ 1.58
C6orf48-205ENST00000375640 PAXIP1Q6ZW49 1069 aaPredicted RBP24.89■■□□□ 1.58
C6orf48-205ENST00000375640 C2orf69Q8N8R5 385 aa24.89■■□□□ 1.58
C6orf48-205ENST00000375640 CAPNS2Q96L46 248 aa24.89■■□□□ 1.58
C6orf48-205ENST00000375640 GBA2Q9HCG7 927 aaPredicted RBP24.89■■□□□ 1.58
C6orf48-205ENST00000375640 JAG2Q9Y219 1238 aa24.89■■□□□ 1.58
C6orf48-205ENST00000375640 SRGAP3O43295 1099 aa24.88■■□□□ 1.57
C6orf48-205ENST00000375640 SLC5A1P13866 664 aa24.88■■□□□ 1.57
C6orf48-205ENST00000375640 MFSD14BQ5SR56 506 aa24.88■■□□□ 1.57
C6orf48-205ENST00000375640 DZIP1LQ8IYY4 767 aaKnown RBP24.88■■□□□ 1.57
C6orf48-205ENST00000375640 CDCA5Q96FF9 252 aa24.88■■□□□ 1.57
C6orf48-205ENST00000375640 F8W031 263 aaPredicted RBP24.87■■□□□ 1.57
C6orf48-205ENST00000375640 FRAT2O75474 233 aaPredicted RBP24.87■■□□□ 1.57
C6orf48-205ENST00000375640 BCAMP50895 628 aa24.87■■□□□ 1.57
C6orf48-205ENST00000375640 CYP4F22Q6NT55 531 aa24.87■■□□□ 1.57
C6orf48-205ENST00000375640 FTSJ3Q8IY81 847 aaKnown RBP24.87■■□□□ 1.57
C6orf48-205ENST00000375640 PA2G4Q9UQ80 394 aaKnown RBP24.87■■□□□ 1.57
C6orf48-205ENST00000375640 HUNKP57058 714 aa24.85■■□□□ 1.57
C6orf48-205ENST00000375640 CFAP100Q494V2 611 aa24.85■■□□□ 1.57
C6orf48-205ENST00000375640 TBC1D22AQ8WUA7 517 aa24.85■■□□□ 1.57
C6orf48-205ENST00000375640 MAP2K2P36507 400 aa24.84■■□□□ 1.57
C6orf48-205ENST00000375640 MAP2K1Q02750 393 aaPredicted RBP24.84■■□□□ 1.57
C6orf48-205ENST00000375640 ATP2B3Q16720 1220 aa24.84■■□□□ 1.57
C6orf48-205ENST00000375640 APOBEC3FQ8IUX4 373 aaKnown RBP24.84■■□□□ 1.57
C6orf48-205ENST00000375640 WBP1LQ9NX94 342 aa24.84■■□□□ 1.57
C6orf48-205ENST00000375640 IQSEC3Q9UPP2 1182 aaPredicted RBP24.84■■□□□ 1.57
C6orf48-205ENST00000375640 PSME4Q14997 1843 aa24.84■■□□□ 1.57
C6orf48-205ENST00000375640 MYO1BO43795 1136 aa24.83■■□□□ 1.57
C6orf48-205ENST00000375640 FKBP1BP68106 108 aa24.83■■□□□ 1.57
C6orf48-205ENST00000375640 GRM1Q13255 1194 aa24.83■■□□□ 1.57
C6orf48-205ENST00000375640 SERPINA10Q9UK55 444 aa24.83■■□□□ 1.57
C6orf48-205ENST00000375640 TTF2Q9UNY4 1162 aaKnown RBP24.83■■□□□ 1.57
C6orf48-205ENST00000375640 SPDYE2BA6NHP3 402 aa24.82■■□□□ 1.56
C6orf48-205ENST00000375640 SPDYE6P0CI01 402 aa24.82■■□□□ 1.56
C6orf48-205ENST00000375640 CHAF1AQ13111 956 aaPredicted RBP24.82■■□□□ 1.56
C6orf48-205ENST00000375640 PRMT6Q96LA8 375 aaPredicted RBP24.82■■□□□ 1.56
C6orf48-205ENST00000375640 SCAF8Q9UPN6 1271 aaKnown RBP24.82■■□□□ 1.56
C6orf48-205ENST00000375640 ZBTB7BO15156 539 aaPredicted RBP24.81■■□□□ 1.56
C6orf48-205ENST00000375640 RLBP1P12271 317 aa24.81■■□□□ 1.56
C6orf48-205ENST00000375640 RBM5P52756 815 aaKnown RBP eCLIP24.81■■□□□ 1.561e-9■■■■■ 34.1
C6orf48-205ENST00000375640 ITPRIPQ8IWB1 547 aa24.81■■□□□ 1.56
C6orf48-205ENST00000375640 AIDAQ96BJ3 306 aa24.81■■□□□ 1.56
C6orf48-205ENST00000375640 GNL3LQ9NVN8 582 aaKnown RBP24.81■■□□□ 1.56
C6orf48-205ENST00000375640 SUGT1Q9Y2Z0 365 aa24.81■■□□□ 1.56
C6orf48-205ENST00000375640 MS4A1P11836 297 aa24.8■■□□□ 1.56
C6orf48-205ENST00000375640 RGMBQ6NW40 437 aa24.8■■□□□ 1.56
C6orf48-205ENST00000375640 CCDC102AQ96A19 550 aa24.8■■□□□ 1.56
C6orf48-205ENST00000375640 MRIQ9BWK5 157 aa24.8■■□□□ 1.56
C6orf48-205ENST00000375640 PCDHAC2Q9Y5I4 1007 aa24.8■■□□□ 1.56
C6orf48-205ENST00000375640 NF2P35240 595 aa24.79■■□□□ 1.56
C6orf48-205ENST00000375640 HDLBPQ00341 1268 aaKnown RBP24.79■■□□□ 1.56
C6orf48-205ENST00000375640 PRAMEF18Q5VWM3 479 aa24.79■■□□□ 1.56
C6orf48-205ENST00000375640 AKAP2Q9Y2D5 859 aa24.79■■□□□ 1.56
C6orf48-205ENST00000375640 PNMA6EA0A0J9YXQ4 647 aa24.78■■□□□ 1.56
C6orf48-205ENST00000375640 ZBTB22O15209 634 aa24.78■■□□□ 1.56
C6orf48-205ENST00000375640 ATP8B2P98198 1209 aa24.78■■□□□ 1.56
C6orf48-205ENST00000375640 WDR66Q8TBY9 1149 aa24.78■■□□□ 1.56
C6orf48-205ENST00000375640 DEFB129Q9H1M3 183 aa24.78■■□□□ 1.56
C6orf48-205ENST00000375640 AOC2O75106 756 aa24.77■■□□□ 1.56
C6orf48-205ENST00000375640 CRKP46108 304 aa24.77■■□□□ 1.56
C6orf48-205ENST00000375640 NOGQ13253 232 aa24.77■■□□□ 1.56
C6orf48-205ENST00000375640 G3BP1Q13283 466 aaKnown RBP eCLIP24.77■■□□□ 1.56
C6orf48-205ENST00000375640 PPP2R3BQ9Y5P8 575 aa24.77■■□□□ 1.56
C6orf48-205ENST00000375640 A0A1B0GUL6 1792 aa24.77■■□□□ 1.56
C6orf48-205ENST00000375640 SEMA3EO15041 775 aa24.76■■□□□ 1.55
C6orf48-205ENST00000375640 FOXN1O15353 648 aa24.76■■□□□ 1.55
C6orf48-205ENST00000375640 ZNF157P51786 506 aaPredicted RBP24.76■■□□□ 1.55
C6orf48-205ENST00000375640 TIMM10P62072 90 aa24.76■■□□□ 1.55
C6orf48-205ENST00000375640 TFCP2Q12800 502 aa24.76■■□□□ 1.55
C6orf48-205ENST00000375640 GRIK5Q16478 980 aa24.76■■□□□ 1.55
C6orf48-205ENST00000375640 PCNTO95613 3336 aa24.76■■□□□ 1.55
C6orf48-205ENST00000375640 CLRN2A0PK11 232 aa24.75■■□□□ 1.55
C6orf48-205ENST00000375640 CTCFP49711 727 aaPredicted RBP24.75■■□□□ 1.55
C6orf48-205ENST00000375640 POLA2Q14181 598 aa24.75■■□□□ 1.55
C6orf48-205ENST00000375640 SSH3Q8TE77 659 aa24.75■■□□□ 1.55
C6orf48-205ENST00000375640 BEGAINQ9BUH8 593 aa24.75■■□□□ 1.55
C6orf48-205ENST00000375640 RCAN3Q9UKA8 241 aa24.75■■□□□ 1.55
C6orf48-205ENST00000375640 DENND2AQ9ULE3 1009 aa24.75■■□□□ 1.55
C6orf48-205ENST00000375640 ZNF646O15015 1829 aaPredicted RBP24.75■■□□□ 1.55
C6orf48-205ENST00000375640 TRPM7Q96QT4 1865 aa24.75■■□□□ 1.55
C6orf48-205ENST00000375640 FAM155AB1AL88 458 aaPredicted RBP24.74■■□□□ 1.55
C6orf48-205ENST00000375640 SPDYE2Q495Y8 402 aa24.74■■□□□ 1.55
C6orf48-205ENST00000375640 PANK1Q8TE04 598 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms