RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 EIF3JO75822 258 aaKnown RBP11.98□□□□□ -0.49
PRPF38B-201ENST00000370021 TPM1P09493 284 aa11.98□□□□□ -0.49
PRPF38B-201ENST00000370021 LRRFIP1Q32MZ4 808 aaKnown RBP11.98□□□□□ -0.49
PRPF38B-201ENST00000370021 CAPZA3Q96KX2 299 aa11.98□□□□□ -0.49
PRPF38B-201ENST00000370021 CENPHQ9H3R5 247 aa11.98□□□□□ -0.49
PRPF38B-201ENST00000370021 HMG20BQ9P0W2 317 aa11.98□□□□□ -0.49
PRPF38B-201ENST00000370021 LCMT1Q9UIC8 334 aa11.98□□□□□ -0.49
PRPF38B-201ENST00000370021 HOOK1Q9UJC3 728 aaKnown RBP11.98□□□□□ -0.49
PRPF38B-201ENST00000370021 ADAM21Q9UKJ8 722 aa11.98□□□□□ -0.49
PRPF38B-201ENST00000370021 EPB41L2O43491 1005 aaKnown RBP11.98□□□□□ -0.49
PRPF38B-201ENST00000370021 ERLIN1O75477 346 aa11.98□□□□□ -0.49
PRPF38B-201ENST00000370021 MATR3P43243 847 aaKnown RBP eCLIP11.98□□□□□ -0.49
PRPF38B-201ENST00000370021 SART3Q15020 963 aaKnown RBP11.98□□□□□ -0.49
PRPF38B-201ENST00000370021 AIFM3Q96NN9 605 aa11.98□□□□□ -0.49
PRPF38B-201ENST00000370021 SUGCTQ9HAC7 445 aa11.98□□□□□ -0.49
PRPF38B-201ENST00000370021 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.98□□□□□ -0.49
PRPF38B-201ENST00000370021 AOX1Q06278 1338 aa11.98□□□□□ -0.49
PRPF38B-201ENST00000370021 A0A087WZG4 1122 aa11.97□□□□□ -0.49
PRPF38B-201ENST00000370021 PATL2C9JE40 543 aaKnown RBP11.97□□□□□ -0.49
PRPF38B-201ENST00000370021 COPS6Q7L5N1 327 aa11.97□□□□□ -0.49
PRPF38B-201ENST00000370021 GOLGA1Q92805 767 aa11.97□□□□□ -0.49
PRPF38B-201ENST00000370021 DHX58Q96C10 678 aa11.97□□□□□ -0.49
PRPF38B-201ENST00000370021 WDR24Q96S15 920 aa11.97□□□□□ -0.49
PRPF38B-201ENST00000370021 PPP2R2CQ9Y2T4 447 aa11.97□□□□□ -0.49
PRPF38B-201ENST00000370021 ZMYND10O75800 440 aa11.97□□□□□ -0.49
PRPF38B-201ENST00000370021 PSME1Q06323 249 aa11.97□□□□□ -0.49
PRPF38B-201ENST00000370021 NUP133Q8WUM0 1156 aa11.97□□□□□ -0.49
PRPF38B-201ENST00000370021 STAMQ92783 540 aa11.97□□□□□ -0.49
PRPF38B-201ENST00000370021 PHKBQ93100 1093 aa11.97□□□□□ -0.49
PRPF38B-201ENST00000370021 MYL10Q9BUA6 226 aa11.97□□□□□ -0.49
PRPF38B-201ENST00000370021 NSUN7Q8NE18 718 aaKnown RBP11.97□□□□□ -0.49
PRPF38B-201ENST00000370021 MTMR7Q9Y216 660 aa11.97□□□□□ -0.49
PRPF38B-201ENST00000370021 RRP15Q9Y3B9 282 aaKnown RBP11.97□□□□□ -0.49
PRPF38B-201ENST00000370021 DLG5Q8TDM6 1919 aa11.97□□□□□ -0.49
PRPF38B-201ENST00000370021 IFIT1P09914 478 aaKnown RBP11.96□□□□□ -0.49
PRPF38B-201ENST00000370021 DHX16O60231 1041 aaKnown RBP11.96□□□□□ -0.49
PRPF38B-201ENST00000370021 PFKFB1P16118 471 aa11.96□□□□□ -0.49
PRPF38B-201ENST00000370021 MNAT1P51948 309 aa11.96□□□□□ -0.49
PRPF38B-201ENST00000370021 CHMP4BP1P59074 171 aa11.96□□□□□ -0.49
PRPF38B-201ENST00000370021 MYL5Q02045 173 aa11.96□□□□□ -0.49
PRPF38B-201ENST00000370021 TTC19Q6DKK2 380 aaPredicted RBP11.96□□□□□ -0.49
PRPF38B-201ENST00000370021 KSR2Q6VAB6 950 aa11.96□□□□□ -0.49
PRPF38B-201ENST00000370021 XAGE3Q8WTP9 111 aa11.96□□□□□ -0.49
PRPF38B-201ENST00000370021 FAM107BQ9H098 131 aa11.96□□□□□ -0.49
PRPF38B-201ENST00000370021 FAN1Q9Y2M0 1017 aa11.96□□□□□ -0.49
PRPF38B-201ENST00000370021 TTC21AQ8NDW8 1320 aa11.96□□□□□ -0.49
PRPF38B-201ENST00000370021 MAP2P11137 1827 aaKnown RBP11.96□□□□□ -0.5
PRPF38B-201ENST00000370021 PRR36Q9H6K5 1346 aa11.96□□□□□ -0.5
PRPF38B-201ENST00000370021 TFRCP02786 760 aaKnown RBP11.96□□□□□ -0.5
PRPF38B-201ENST00000370021 LONRF2Q1L5Z9 754 aa11.96□□□□□ -0.5
PRPF38B-201ENST00000370021 TTC31Q49AM3 519 aaPredicted RBP11.96□□□□□ -0.5
PRPF38B-201ENST00000370021 CCDC102BQ68D86 513 aa11.96□□□□□ -0.5
PRPF38B-201ENST00000370021 NLRP2Q9NX02 1062 aa11.96□□□□□ -0.5
PRPF38B-201ENST00000370021 RCOR1Q9UKL0 485 aa11.96□□□□□ -0.5
PRPF38B-201ENST00000370021 POLA2Q14181 598 aa11.95□□□□□ -0.5
PRPF38B-201ENST00000370021 TTC5Q8N0Z6 440 aa11.95□□□□□ -0.5
PRPF38B-201ENST00000370021 NOC3LQ8WTT2 800 aaKnown RBP11.95□□□□□ -0.5
PRPF38B-201ENST00000370021 TSR1Q2NL82 804 aaKnown RBP11.95□□□□□ -0.5
PRPF38B-201ENST00000370021 LMBR1LQ6UX01 489 aa11.95□□□□□ -0.5
PRPF38B-201ENST00000370021 KCNG4Q8TDN1 519 aa11.95□□□□□ -0.5
PRPF38B-201ENST00000370021 ALG1Q9BT22 464 aa11.95□□□□□ -0.5
PRPF38B-201ENST00000370021 NFE2L3Q9Y4A8 694 aa11.95□□□□□ -0.5
PRPF38B-201ENST00000370021 EDC4Q6P2E9 1401 aaKnown RBP11.95□□□□□ -0.5
PRPF38B-201ENST00000370021 MTF1Q14872 753 aa11.95□□□□□ -0.5
PRPF38B-201ENST00000370021 GRAMD1CQ8IYS0 662 aa11.95□□□□□ -0.5
PRPF38B-201ENST00000370021 JMYQ8N9B5 988 aa11.95□□□□□ -0.5
PRPF38B-201ENST00000370021 RGS22Q8NE09 1264 aa11.95□□□□□ -0.5
PRPF38B-201ENST00000370021 SMARCC1Q92922 1105 aaPredicted RBP11.95□□□□□ -0.5
PRPF38B-201ENST00000370021 EFCAB8A8MWE9 144 aa11.94□□□□□ -0.5
PRPF38B-201ENST00000370021 CDC25BP30305 580 aa11.94□□□□□ -0.5
PRPF38B-201ENST00000370021 CCT6AP40227 531 aaKnown RBP11.94□□□□□ -0.5
PRPF38B-201ENST00000370021 NLRP12P59046 1061 aa11.94□□□□□ -0.5
PRPF38B-201ENST00000370021 SAFBQ15424 915 aaKnown RBP eCLIP11.94□□□□□ -0.5
PRPF38B-201ENST00000370021 PLEKHO1Q53GL0 409 aaPredicted RBP11.94□□□□□ -0.5
PRPF38B-201ENST00000370021 CC2D1AQ6P1N0 951 aaPredicted RBP11.94□□□□□ -0.5
PRPF38B-201ENST00000370021 EEF2KMTQ96G04 330 aa11.94□□□□□ -0.5
PRPF38B-201ENST00000370021 IMPACTQ9P2X3 320 aa11.94□□□□□ -0.5
PRPF38B-201ENST00000370021 GUCA1BQ9UMX6 200 aa11.94□□□□□ -0.5
PRPF38B-201ENST00000370021 MAPK8IP1Q9UQF2 711 aa11.94□□□□□ -0.5
PRPF38B-201ENST00000370021 ALKQ9UM73 1620 aa11.94□□□□□ -0.5
PRPF38B-201ENST00000370021 PRC1O43663 620 aa11.94□□□□□ -0.5
PRPF38B-201ENST00000370021 N4BP1O75113 896 aaKnown RBP11.94□□□□□ -0.5
PRPF38B-201ENST00000370021 IDH1O75874 414 aaKnown RBP11.94□□□□□ -0.5
PRPF38B-201ENST00000370021 ADD1P35611 737 aaKnown RBP11.94□□□□□ -0.5
PRPF38B-201ENST00000370021 NAP1L1P55209 391 aaKnown RBP11.94□□□□□ -0.5
PRPF38B-201ENST00000370021 EIF4A1P60842 406 aaKnown RBP11.94□□□□□ -0.5
PRPF38B-201ENST00000370021 ANO1Q5XXA6 986 aa11.94□□□□□ -0.5
PRPF38B-201ENST00000370021 ADALQ6DHV7 355 aa11.94□□□□□ -0.5
PRPF38B-201ENST00000370021 TOGARAM2Q6ZUX3 1019 aa11.94□□□□□ -0.5
PRPF38B-201ENST00000370021 ZNF594Q96JF6 807 aaPredicted RBP11.94□□□□□ -0.5
PRPF38B-201ENST00000370021 MRPS25P82663 173 aaKnown RBP11.94□□□□□ -0.5
PRPF38B-201ENST00000370021 IMMTQ16891 758 aaKnown RBP11.94□□□□□ -0.5
PRPF38B-201ENST00000370021 SARM1Q6SZW1 724 aa11.94□□□□□ -0.5
PRPF38B-201ENST00000370021 NUP88Q99567 741 aaPredicted RBP11.94□□□□□ -0.5
PRPF38B-201ENST00000370021 ACBD3Q9H3P7 528 aa11.94□□□□□ -0.5
PRPF38B-201ENST00000370021 DBNLQ9UJU6 430 aaKnown RBP11.94□□□□□ -0.5
PRPF38B-201ENST00000370021 NBPF11Q86T75 865 aa11.93□□□□□ -0.5
PRPF38B-201ENST00000370021 CMTR1Q8N1G2 835 aaKnown RBP11.93□□□□□ -0.5
PRPF38B-201ENST00000370021 CRACR2AQ9BSW2 395 aa11.93□□□□□ -0.5
PRPF38B-201ENST00000370021 NRXN3Q9Y4C0 1643 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms