RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 MOB2Q70IA6 237 aa7.88□□□□□ -1.15
CDC42SE2-201ENST00000360515 COL25A1Q9BXS0 654 aaPredicted RBP7.88□□□□□ -1.15
CDC42SE2-201ENST00000360515 SERPINA10Q9UK55 444 aa7.88□□□□□ -1.15
CDC42SE2-201ENST00000360515 NR2E3Q9Y5X4 410 aa7.88□□□□□ -1.15
CDC42SE2-201ENST00000360515 BCRP11274 1271 aa7.88□□□□□ -1.15
CDC42SE2-201ENST00000360515 XAGE3Q8WTP9 111 aa7.88□□□□□ -1.15
CDC42SE2-201ENST00000360515 SLC10A4Q96EP9 437 aa7.88□□□□□ -1.15
CDC42SE2-201ENST00000360515 CHMP4AQ9BY43 222 aa7.88□□□□□ -1.15
CDC42SE2-201ENST00000360515 ANKRD2Q9GZV1 360 aa7.88□□□□□ -1.15
CDC42SE2-201ENST00000360515 DBF4Q9UBU7 674 aaPredicted RBP7.88□□□□□ -1.15
CDC42SE2-201ENST00000360515 IGHA2P01877 340 aa7.87□□□□□ -1.15
CDC42SE2-201ENST00000360515 CASP7P55210 303 aa7.87□□□□□ -1.15
CDC42SE2-201ENST00000360515 ATRNL1Q5VV63 1379 aa7.87□□□□□ -1.15
CDC42SE2-201ENST00000360515 IRS4O14654 1257 aaPredicted RBP7.87□□□□□ -1.15
CDC42SE2-201ENST00000360515 UFL1O94874 794 aa7.87□□□□□ -1.15
CDC42SE2-201ENST00000360515 SLC9C1Q4G0N8 1177 aa7.87□□□□□ -1.15
CDC42SE2-201ENST00000360515 CHRDL2Q6WN34 429 aa7.87□□□□□ -1.15
CDC42SE2-201ENST00000360515 FAM83AQ86UY5 434 aa7.87□□□□□ -1.15
CDC42SE2-201ENST00000360515 DEFB129Q9H1M3 183 aa7.87□□□□□ -1.15
CDC42SE2-201ENST00000360515 MINPP1Q9UNW1 487 aa7.87□□□□□ -1.15
CDC42SE2-201ENST00000360515 NSFL1CQ9UNZ2 370 aaKnown RBP7.87□□□□□ -1.15
CDC42SE2-201ENST00000360515 ZNF330Q9Y3S2 320 aaPredicted RBP7.87□□□□□ -1.15
CDC42SE2-201ENST00000360515 PPP1R12BO60237 982 aaPredicted RBP7.87□□□□□ -1.15
CDC42SE2-201ENST00000360515 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.87□□□□□ -1.15
CDC42SE2-201ENST00000360515 SUGT1Q9Y2Z0 365 aa7.87□□□□□ -1.15
CDC42SE2-201ENST00000360515 SIPA1L1O43166 1804 aa7.86□□□□□ -1.15
CDC42SE2-201ENST00000360515 COL11A1P12107 1806 aaPredicted RBP7.86□□□□□ -1.15
CDC42SE2-201ENST00000360515 SGPL1O95470 568 aa7.86□□□□□ -1.15
CDC42SE2-201ENST00000360515 CETPP11597 493 aa7.86□□□□□ -1.15
CDC42SE2-201ENST00000360515 COL6A1P12109 1028 aa7.86□□□□□ -1.15
CDC42SE2-201ENST00000360515 DOK7Q18PE1 504 aa7.86□□□□□ -1.15
CDC42SE2-201ENST00000360515 HOOK2Q96ED9 719 aa7.86□□□□□ -1.15
CDC42SE2-201ENST00000360515 HOXD10P28358 340 aa7.86□□□□□ -1.15
CDC42SE2-201ENST00000360515 CCT4P50991 539 aaKnown RBP7.86□□□□□ -1.15
CDC42SE2-201ENST00000360515 SPINK5Q9NQ38 1064 aaPredicted RBP7.86□□□□□ -1.15
CDC42SE2-201ENST00000360515 H7C1W4 665 aa7.85□□□□□ -1.15
CDC42SE2-201ENST00000360515 CTGFP29279 349 aa7.85□□□□□ -1.15
CDC42SE2-201ENST00000360515 PPATQ06203 517 aa7.85□□□□□ -1.15
CDC42SE2-201ENST00000360515 CDC5LQ99459 802 aaKnown RBP7.85□□□□□ -1.15
CDC42SE2-201ENST00000360515 RPTORQ8N122 1335 aa7.85□□□□□ -1.15
CDC42SE2-201ENST00000360515 C6orf229H3BNL8 230 aa7.85□□□□□ -1.15
CDC42SE2-201ENST00000360515 CTSWP56202 376 aa7.85□□□□□ -1.15
CDC42SE2-201ENST00000360515 TNFAIP1Q13829 316 aa7.85□□□□□ -1.15
CDC42SE2-201ENST00000360515 OGFOD1Q8N543 542 aa7.85□□□□□ -1.15
CDC42SE2-201ENST00000360515 TRIM47Q96LD4 638 aa7.85□□□□□ -1.15
CDC42SE2-201ENST00000360515 CDK5RAP2Q96SN8 1893 aa7.85□□□□□ -1.15
CDC42SE2-201ENST00000360515 METTL22Q9BUU2 404 aaPredicted RBP7.85□□□□□ -1.15
CDC42SE2-201ENST00000360515 ANGEL1Q9UNK9 670 aaKnown RBP7.85□□□□□ -1.15
CDC42SE2-201ENST00000360515 SNCAIPQ9Y6H5 919 aa7.85□□□□□ -1.15
CDC42SE2-201ENST00000360515 U2SURPO15042 1029 aaKnown RBP7.84□□□□□ -1.15
CDC42SE2-201ENST00000360515 MYL6BP14649 208 aa7.84□□□□□ -1.15
CDC42SE2-201ENST00000360515 HOXD11P31277 338 aaPredicted RBP7.84□□□□□ -1.15
CDC42SE2-201ENST00000360515 MAP3K9P80192 1104 aa7.84□□□□□ -1.15
CDC42SE2-201ENST00000360515 DCTN1Q14203 1278 aa7.84□□□□□ -1.15
CDC42SE2-201ENST00000360515 MAP3K21Q5TCX8 1036 aa7.84□□□□□ -1.15
CDC42SE2-201ENST00000360515 ERO1BQ86YB8 467 aa7.84□□□□□ -1.15
CDC42SE2-201ENST00000360515 CERS5Q8N5B7 392 aa7.84□□□□□ -1.15
CDC42SE2-201ENST00000360515 TTLL11Q8NHH1 800 aa7.84□□□□□ -1.15
CDC42SE2-201ENST00000360515 CCL5P13501 91 aa7.84□□□□□ -1.15
CDC42SE2-201ENST00000360515 ANKRD18AQ8IVF6 992 aa7.84□□□□□ -1.15
CDC42SE2-201ENST00000360515 CLMNQ96JQ2 1002 aa7.84□□□□□ -1.15
CDC42SE2-201ENST00000360515 TBC1D2Q9BYX2 928 aa7.84□□□□□ -1.15
CDC42SE2-201ENST00000360515 OGDHLQ9ULD0 1010 aa7.84□□□□□ -1.15
CDC42SE2-201ENST00000360515 FAM177BA6PVY3 158 aa7.84□□□□□ -1.16
CDC42SE2-201ENST00000360515 OPTNQ96CV9 577 aa7.84□□□□□ -1.16
CDC42SE2-201ENST00000360515 RRP7AQ9Y3A4 280 aaKnown RBP7.84□□□□□ -1.16
CDC42SE2-201ENST00000360515 PARP14Q460N5 1801 aa7.83□□□□□ -1.16
CDC42SE2-201ENST00000360515 FAM43AQ8N2R8 423 aa7.83□□□□□ -1.16
CDC42SE2-201ENST00000360515 SYMPKQ92797 1274 aaKnown RBP7.83□□□□□ -1.16
CDC42SE2-201ENST00000360515 PLA2G5P39877 138 aa7.83□□□□□ -1.16
CDC42SE2-201ENST00000360515 RIMBP2O15034 1052 aa7.82□□□□□ -1.16
CDC42SE2-201ENST00000360515 GRK4P32298 578 aa7.82□□□□□ -1.16
CDC42SE2-201ENST00000360515 GPAT2Q6NUI2 795 aa7.82□□□□□ -1.16
CDC42SE2-201ENST00000360515 CD209Q9NNX6 404 aa7.82□□□□□ -1.16
CDC42SE2-201ENST00000360515 ROBO3Q96MS0 1386 aa7.82□□□□□ -1.16
CDC42SE2-201ENST00000360515 CXCL11O14625 94 aa7.82□□□□□ -1.16
CDC42SE2-201ENST00000360515 OSBPP22059 807 aa7.82□□□□□ -1.16
CDC42SE2-201ENST00000360515 KIF22Q14807 665 aa7.82□□□□□ -1.16
CDC42SE2-201ENST00000360515 TDHQ8IZJ6 230 aa7.82□□□□□ -1.16
CDC42SE2-201ENST00000360515 TDRD7Q8NHU6 1098 aaKnown RBP7.82□□□□□ -1.16
CDC42SE2-201ENST00000360515 GUCD1Q96NT3 240 aa7.82□□□□□ -1.16
CDC42SE2-201ENST00000360515 TSPYL4Q9UJ04 414 aa7.82□□□□□ -1.16
CDC42SE2-201ENST00000360515 NPM3O75607 178 aaKnown RBP7.82□□□□□ -1.16
CDC42SE2-201ENST00000360515 UBXN2AP68543 259 aa7.82□□□□□ -1.16
CDC42SE2-201ENST00000360515 SNAPC2Q13487 334 aa7.82□□□□□ -1.16
CDC42SE2-201ENST00000360515 SEC31BQ9NQW1 1179 aa7.82□□□□□ -1.16
CDC42SE2-201ENST00000360515 TRIM35Q9UPQ4 493 aa7.82□□□□□ -1.16
CDC42SE2-201ENST00000360515 FARP2O94887 1054 aaPredicted RBP7.81□□□□□ -1.16
CDC42SE2-201ENST00000360515 U2AF1L5P0DN76 240 aaPredicted RBP7.81□□□□□ -1.16
CDC42SE2-201ENST00000360515 U2AF1Q01081 240 aaKnown RBP eCLIP7.81□□□□□ -1.16
CDC42SE2-201ENST00000360515 C1orf53Q5VUE5 145 aa7.81□□□□□ -1.16
CDC42SE2-201ENST00000360515 TRMT44Q8IYL2 757 aaKnown RBP7.81□□□□□ -1.16
CDC42SE2-201ENST00000360515 FAM89AQ96GI7 184 aa7.81□□□□□ -1.16
CDC42SE2-201ENST00000360515 CWC25Q9NXE8 425 aaPredicted RBP7.81□□□□□ -1.16
CDC42SE2-201ENST00000360515 RIPOR2Q9Y4F9 1068 aa7.81□□□□□ -1.16
CDC42SE2-201ENST00000360515 BTBD19C9JJ37 291 aa7.81□□□□□ -1.16
CDC42SE2-201ENST00000360515 VGLL4Q14135 290 aa7.81□□□□□ -1.16
CDC42SE2-201ENST00000360515 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.81□□□□□ -1.16
CDC42SE2-201ENST00000360515 U2AF1L4Q8WU68 220 aaKnown RBP7.81□□□□□ -1.16
CDC42SE2-201ENST00000360515 TMPOP42166 694 aaKnown RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms