RNA–Protein interactions for RNA: ENST00000358598.6

PRKAR1A-201, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAR1A, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1A-201ENST00000358598 FSIP1Q8NA03 581 aa12.84□□□□□ -0.35
PRKAR1A-201ENST00000358598 CHMP4CQ96CF2 233 aa12.84□□□□□ -0.35
PRKAR1A-201ENST00000358598 UTP14AQ9BVJ6 771 aaKnown RBP12.84□□□□□ -0.35
PRKAR1A-201ENST00000358598 DDX19AQ9NUU7 478 aaKnown RBP12.84□□□□□ -0.35
PRKAR1A-201ENST00000358598 RAI14Q9P0K7 980 aa12.84□□□□□ -0.35
PRKAR1A-201ENST00000358598 VSIG10Q8N0Z9 540 aa12.84□□□□□ -0.35
PRKAR1A-201ENST00000358598 CCDC24Q8N4L8 307 aa12.84□□□□□ -0.35
PRKAR1A-201ENST00000358598 MYL10Q9BUA6 226 aa12.84□□□□□ -0.35
PRKAR1A-201ENST00000358598 MINDY4BA8MYZ0 360 aa12.83□□□□□ -0.36
PRKAR1A-201ENST00000358598 ZNF165P49910 485 aa12.83□□□□□ -0.36
PRKAR1A-201ENST00000358598 TRIM29Q14134 588 aa12.83□□□□□ -0.36
PRKAR1A-201ENST00000358598 TTF1Q15361 905 aaPredicted RBP12.83□□□□□ -0.36
PRKAR1A-201ENST00000358598 SLC4A9Q96Q91 983 aa12.83□□□□□ -0.36
PRKAR1A-201ENST00000358598 A0A087WWV3 80 aa12.83□□□□□ -0.36
PRKAR1A-201ENST00000358598 RBM10P98175 930 aaKnown RBP12.83□□□□□ -0.36
PRKAR1A-201ENST00000358598 UVSSAQ2YD98 709 aa12.83□□□□□ -0.36
PRKAR1A-201ENST00000358598 NUP133Q8WUM0 1156 aa12.83□□□□□ -0.36
PRKAR1A-201ENST00000358598 USP28Q96RU2 1077 aa12.83□□□□□ -0.36
PRKAR1A-201ENST00000358598 KDM4FA0A1W2PPD8 638 aa12.82□□□□□ -0.36
PRKAR1A-201ENST00000358598 TRIM28Q13263 835 aaKnown RBP12.82□□□□□ -0.36
PRKAR1A-201ENST00000358598 SMIM5Q71RC9 77 aa12.82□□□□□ -0.36
PRKAR1A-201ENST00000358598 PDLIM2Q96JY6 352 aa12.82□□□□□ -0.36
PRKAR1A-201ENST00000358598 ZKSCAN3Q9BRR0 538 aa12.82□□□□□ -0.36
PRKAR1A-201ENST00000358598 ARMT1Q9H993 441 aa12.82□□□□□ -0.36
PRKAR1A-201ENST00000358598 PIH1D3Q9NQM4 214 aaKnown RBP12.82□□□□□ -0.36
PRKAR1A-201ENST00000358598 INCENPQ9NQS7 918 aa12.82□□□□□ -0.36
PRKAR1A-201ENST00000358598 CCDC87Q9NVE4 849 aa12.82□□□□□ -0.36
PRKAR1A-201ENST00000358598 FAM13BQ9NYF5 915 aa12.82□□□□□ -0.36
PRKAR1A-201ENST00000358598 WWC3Q9ULE0 1092 aa12.82□□□□□ -0.36
PRKAR1A-201ENST00000358598 TRPM3Q9HCF6 1732 aaPredicted RBP12.82□□□□□ -0.36
PRKAR1A-201ENST00000358598 MBD4O95243 580 aa12.82□□□□□ -0.36
PRKAR1A-201ENST00000358598 CRKLP46109 303 aaKnown RBP12.82□□□□□ -0.36
PRKAR1A-201ENST00000358598 PUM3Q15397 648 aaKnown RBP12.82□□□□□ -0.36
PRKAR1A-201ENST00000358598 FAM200AQ8TCP9 573 aa12.82□□□□□ -0.36
PRKAR1A-201ENST00000358598 IFIT3O14879 490 aaKnown RBP12.82□□□□□ -0.36
PRKAR1A-201ENST00000358598 METAP2P50579 478 aaKnown RBP eCLIP12.82□□□□□ -0.36
PRKAR1A-201ENST00000358598 TMEM67Q5HYA8 995 aa12.82□□□□□ -0.36
PRKAR1A-201ENST00000358598 SUSD4Q5VX71 490 aa12.82□□□□□ -0.36
PRKAR1A-201ENST00000358598 LLPHQ9BRT6 129 aaKnown RBP12.82□□□□□ -0.36
PRKAR1A-201ENST00000358598 BCL11BQ9C0K0 894 aaPredicted RBP12.82□□□□□ -0.36
PRKAR1A-201ENST00000358598 RIPOR2Q9Y4F9 1068 aa12.82□□□□□ -0.36
PRKAR1A-201ENST00000358598 BCAMP50895 628 aa12.81□□□□□ -0.36
PRKAR1A-201ENST00000358598 RESTQ13127 1097 aa12.81□□□□□ -0.36
PRKAR1A-201ENST00000358598 CCDC152Q4G0S7 254 aa12.81□□□□□ -0.36
PRKAR1A-201ENST00000358598 HS1BP3Q53T59 392 aa12.81□□□□□ -0.36
PRKAR1A-201ENST00000358598 PGBD1Q96JS3 809 aa12.81□□□□□ -0.36
PRKAR1A-201ENST00000358598 DENND2AQ9ULE3 1009 aa12.81□□□□□ -0.36
PRKAR1A-201ENST00000358598 LMTK3Q96Q04 1460 aa12.81□□□□□ -0.36
PRKAR1A-201ENST00000358598 USP54Q70EL1 1684 aa12.81□□□□□ -0.36
PRKAR1A-201ENST00000358598 LOC102724428A0A0B4J2F2 783 aa12.81□□□□□ -0.36
PRKAR1A-201ENST00000358598 CCDC69A6NI79 296 aa12.81□□□□□ -0.36
PRKAR1A-201ENST00000358598 UQCRFS1P1P0C7P4 283 aa12.81□□□□□ -0.36
PRKAR1A-201ENST00000358598 PDE6AP16499 860 aa12.81□□□□□ -0.36
PRKAR1A-201ENST00000358598 ADD1P35611 737 aaKnown RBP12.81□□□□□ -0.36
PRKAR1A-201ENST00000358598 SIK1P57059 783 aa12.81□□□□□ -0.36
PRKAR1A-201ENST00000358598 PHKBQ93100 1093 aa12.81□□□□□ -0.36
PRKAR1A-201ENST00000358598 ERICH2A1L162 156 aa12.81□□□□□ -0.36
PRKAR1A-201ENST00000358598 CSF1RP07333 972 aa12.81□□□□□ -0.36
PRKAR1A-201ENST00000358598 IL6STP40189 918 aaPredicted RBP12.81□□□□□ -0.36
PRKAR1A-201ENST00000358598 CTDSPL2Q05D32 466 aa12.81□□□□□ -0.36
PRKAR1A-201ENST00000358598 LPIN2Q92539 896 aa12.81□□□□□ -0.36
PRKAR1A-201ENST00000358598 PALLDQ8WX93 1383 aa12.8□□□□□ -0.36
PRKAR1A-201ENST00000358598 A0A1B0GVL5 298 aa12.8□□□□□ -0.36
PRKAR1A-201ENST00000358598 BIN1O00499 593 aa12.8□□□□□ -0.36
PRKAR1A-201ENST00000358598 MARCKSP29966 332 aaPredicted RBP12.8□□□□□ -0.36
PRKAR1A-201ENST00000358598 ISM2Q6H9L7 571 aa12.8□□□□□ -0.36
PRKAR1A-201ENST00000358598 SPATA5Q8NB90 893 aa12.8□□□□□ -0.36
PRKAR1A-201ENST00000358598 NACAP1Q9BZK3 213 aa12.8□□□□□ -0.36
PRKAR1A-201ENST00000358598 FAM98CQ17RN3 349 aaKnown RBP12.8□□□□□ -0.36
PRKAR1A-201ENST00000358598 NGLY1Q96IV0 654 aa12.8□□□□□ -0.36
PRKAR1A-201ENST00000358598 FBXO3Q9UK99 471 aa12.8□□□□□ -0.36
PRKAR1A-201ENST00000358598 GOLGA8AA7E2F4 631 aa12.8□□□□□ -0.36
PRKAR1A-201ENST00000358598 EXOSC10Q01780 885 aaKnown RBP12.8□□□□□ -0.36
PRKAR1A-201ENST00000358598 SLC4A8Q2Y0W8 1093 aa12.8□□□□□ -0.36
PRKAR1A-201ENST00000358598 JAG2Q9Y219 1238 aa12.8□□□□□ -0.36
PRKAR1A-201ENST00000358598 SLC4A4Q9Y6R1 1079 aa12.8□□□□□ -0.36
PRKAR1A-201ENST00000358598 TCHHQ07283 1943 aa12.79□□□□□ -0.36
PRKAR1A-201ENST00000358598 KCNQ2O43526 872 aa12.79□□□□□ -0.36
PRKAR1A-201ENST00000358598 CTDNEP1O95476 244 aa12.79□□□□□ -0.36
PRKAR1A-201ENST00000358598 HSP90AA2PQ14568 343 aaPredicted RBP12.79□□□□□ -0.36
PRKAR1A-201ENST00000358598 ZNF274Q96GC6 653 aaPredicted RBP12.79□□□□□ -0.36
PRKAR1A-201ENST00000358598 ALG1Q9BT22 464 aa12.79□□□□□ -0.36
PRKAR1A-201ENST00000358598 SLC12A7Q9Y666 1083 aa12.79□□□□□ -0.36
PRKAR1A-201ENST00000358598 OFD1O75665 1012 aa12.79□□□□□ -0.36
PRKAR1A-201ENST00000358598 ADD2P35612 726 aa12.79□□□□□ -0.36
PRKAR1A-201ENST00000358598 CHAF1AQ13111 956 aaPredicted RBP12.79□□□□□ -0.36
PRKAR1A-201ENST00000358598 NAA16Q6N069 864 aaPredicted RBP12.79□□□□□ -0.36
PRKAR1A-201ENST00000358598 C8orf37Q96NL8 207 aa12.79□□□□□ -0.36
PRKAR1A-201ENST00000358598 AIFM3Q96NN9 605 aa12.79□□□□□ -0.36
PRKAR1A-201ENST00000358598 ALDH8A1Q9H2A2 487 aaPredicted RBP12.79□□□□□ -0.36
PRKAR1A-201ENST00000358598 CLSTN2Q9H4D0 955 aa12.79□□□□□ -0.36
PRKAR1A-201ENST00000358598 CBX8Q9HC52 389 aa12.79□□□□□ -0.36
PRKAR1A-201ENST00000358598 FAM182BQ5T319 152 aa12.79□□□□□ -0.36
PRKAR1A-201ENST00000358598 SLC26A6Q9BXS9 759 aa12.79□□□□□ -0.36
PRKAR1A-201ENST00000358598 C5P01031 1676 aa12.78□□□□□ -0.36
PRKAR1A-201ENST00000358598 UBN2Q6ZU65 1347 aa12.78□□□□□ -0.36
PRKAR1A-201ENST00000358598 ZBTB43O43298 467 aa12.78□□□□□ -0.36
PRKAR1A-201ENST00000358598 PRKAB2O43741 272 aa12.78□□□□□ -0.36
PRKAR1A-201ENST00000358598 CYP7A1P22680 504 aa12.78□□□□□ -0.36
PRKAR1A-201ENST00000358598 SART3Q15020 963 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms