RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 SKIDA1Q1XH10 827 aa16.93■□□□□ 0.3
NUP50-201ENST00000347635 SYT10Q6XYQ8 523 aa16.93■□□□□ 0.3
NUP50-201ENST00000347635 ERO1AQ96HE7 468 aa16.93■□□□□ 0.3
NUP50-201ENST00000347635 ALKQ9UM73 1620 aa16.93■□□□□ 0.3
NUP50-201ENST00000347635 H0YHG0 523 aa16.92■□□□□ 0.3
NUP50-201ENST00000347635 TXLNBQ8N3L3 684 aa16.92■□□□□ 0.3
NUP50-201ENST00000347635 NUP88Q99567 741 aaPredicted RBP16.92■□□□□ 0.3
NUP50-201ENST00000347635 FAM193AP78312 1265 aa16.92■□□□□ 0.3
NUP50-201ENST00000347635 MINDY4BA8MYZ0 360 aa16.92■□□□□ 0.3
NUP50-201ENST00000347635 C6orf229H3BNL8 230 aa16.92■□□□□ 0.3
NUP50-201ENST00000347635 GSTO1P78417 241 aa16.92■□□□□ 0.3
NUP50-201ENST00000347635 PDE4CQ08493 712 aa16.92■□□□□ 0.3
NUP50-201ENST00000347635 TSC1Q92574 1164 aa16.92■□□□□ 0.3
NUP50-201ENST00000347635 TPCN1Q9ULQ1 816 aa16.92■□□□□ 0.3
NUP50-201ENST00000347635 ZC3H13Q5T200 1668 aaKnown RBP16.92■□□□□ 0.3
NUP50-201ENST00000347635 A0A1B0GVL5 298 aa16.92■□□□□ 0.3
NUP50-201ENST00000347635 SOGA3Q5TF21 947 aa16.92■□□□□ 0.3
NUP50-201ENST00000347635 IL17REQ8NFR9 667 aa16.92■□□□□ 0.3
NUP50-201ENST00000347635 ZBTB43O43298 467 aa16.91■□□□□ 0.3
NUP50-201ENST00000347635 BAG3O95817 575 aa16.91■□□□□ 0.3
NUP50-201ENST00000347635 LIG1P18858 919 aa16.91■□□□□ 0.3
NUP50-201ENST00000347635 KLHDC4Q8TBB5 520 aa16.91■□□□□ 0.3
NUP50-201ENST00000347635 DDX17Q92841 729 aaKnown RBP16.91■□□□□ 0.3
NUP50-201ENST00000347635 PNPLA6Q8IY17 1366 aa16.91■□□□□ 0.3
NUP50-201ENST00000347635 KIAA1210Q9ULL0 1709 aa16.91■□□□□ 0.3
NUP50-201ENST00000347635 RASEFQ8IZ41 740 aa16.91■□□□□ 0.3
NUP50-201ENST00000347635 CARD10Q9BWT7 1032 aa16.91■□□□□ 0.3
NUP50-201ENST00000347635 PODXL2Q9NZ53 605 aa16.91■□□□□ 0.3
NUP50-201ENST00000347635 TULP4Q9NRJ4 1543 aa16.91■□□□□ 0.3
NUP50-201ENST00000347635 ARHGEF40Q8TER5 1519 aa16.9■□□□□ 0.3
NUP50-201ENST00000347635 MCM3P25205 808 aa16.9■□□□□ 0.3
NUP50-201ENST00000347635 MAP9Q49MG5 647 aa16.9■□□□□ 0.3
NUP50-201ENST00000347635 TIGD1Q96MW7 591 aa16.9■□□□□ 0.3
NUP50-201ENST00000347635 PRR36Q9H6K5 1346 aa16.9■□□□□ 0.3
NUP50-201ENST00000347635 JAK2O60674 1132 aa16.9■□□□□ 0.3
NUP50-201ENST00000347635 BEND3Q5T5X7 828 aa16.9■□□□□ 0.3
NUP50-201ENST00000347635 LUC7LQ9NQ29 371 aaKnown RBP16.9■□□□□ 0.3
NUP50-201ENST00000347635 ATP2B3Q16720 1220 aa16.9■□□□□ 0.3
NUP50-201ENST00000347635 TRAPPC3LQ5T215 181 aa16.9■□□□□ 0.3
NUP50-201ENST00000347635 CCDC191Q8NCU4 936 aa16.9■□□□□ 0.3
NUP50-201ENST00000347635 METTL22Q9BUU2 404 aaPredicted RBP16.9■□□□□ 0.3
NUP50-201ENST00000347635 ADGRL3Q9HAR2 1447 aa16.9■□□□□ 0.3
NUP50-201ENST00000347635 YEATS4O95619 227 aa16.9■□□□□ 0.3
NUP50-201ENST00000347635 MFSD6Q6ZSS7 791 aa16.9■□□□□ 0.3
NUP50-201ENST00000347635 NAA16Q6N069 864 aaPredicted RBP16.89■□□□□ 0.29
NUP50-201ENST00000347635 IGSF3O75054 1194 aa16.89■□□□□ 0.29
NUP50-201ENST00000347635 ATP2B2Q01814 1243 aa16.89■□□□□ 0.29
NUP50-201ENST00000347635 GTF3C6Q969F1 213 aa16.89■□□□□ 0.29
NUP50-201ENST00000347635 CRACR2AQ9BSW2 395 aa16.89■□□□□ 0.29
NUP50-201ENST00000347635 HSP90AA4PQ58FG1 418 aa16.89■□□□□ 0.29
NUP50-201ENST00000347635 PHKG2P15735 406 aa16.89■□□□□ 0.29
NUP50-201ENST00000347635 KDRP35968 1356 aa16.88■□□□□ 0.29
NUP50-201ENST00000347635 SAMD1Q6SPF0 538 aaPredicted RBP16.88■□□□□ 0.29
NUP50-201ENST00000347635 TANGO6Q9C0B7 1094 aa16.88■□□□□ 0.29
NUP50-201ENST00000347635 CCNL1Q9UK58 526 aaPredicted RBP16.88■□□□□ 0.29
NUP50-201ENST00000347635 IRS4O14654 1257 aaPredicted RBP16.88■□□□□ 0.29
NUP50-201ENST00000347635 ANKRD2Q9GZV1 360 aa16.88■□□□□ 0.29
NUP50-201ENST00000347635 IGSF1Q8N6C5 1336 aa16.88■□□□□ 0.29
NUP50-201ENST00000347635 DBNDD2Q9BQY9 259 aa16.88■□□□□ 0.29
NUP50-201ENST00000347635 ARFGAP3Q9NP61 516 aa16.88■□□□□ 0.29
NUP50-201ENST00000347635 TFCP2L1Q9NZI6 479 aa16.88■□□□□ 0.29
NUP50-201ENST00000347635 REREQ9P2R6 1566 aa16.88■□□□□ 0.29
NUP50-201ENST00000347635 TTC6Q86TZ1 520 aa16.88■□□□□ 0.29
NUP50-201ENST00000347635 ZSWIM4Q9H7M6 989 aa16.88■□□□□ 0.29
NUP50-201ENST00000347635 DIP2BQ9P265 1576 aa16.88■□□□□ 0.29
NUP50-201ENST00000347635 MKNK2Q9HBH9 465 aa16.87■□□□□ 0.29
NUP50-201ENST00000347635 IMPACTQ9P2X3 320 aa16.87■□□□□ 0.29
NUP50-201ENST00000347635 PARP3Q9Y6F1 533 aa16.87■□□□□ 0.29
NUP50-201ENST00000347635 A0A0D9SFI3 127 aa16.87■□□□□ 0.29
NUP50-201ENST00000347635 NR1I2O75469 434 aa16.87■□□□□ 0.29
NUP50-201ENST00000347635 ADCK5Q3MIX3 580 aa16.87■□□□□ 0.29
NUP50-201ENST00000347635 IQCA1Q86XH1 822 aa16.87■□□□□ 0.29
NUP50-201ENST00000347635 CTCFLQ8NI51 663 aaPredicted RBP16.87■□□□□ 0.29
NUP50-201ENST00000347635 NCOA5Q9HCD5 579 aaKnown RBP16.87■□□□□ 0.29
NUP50-201ENST00000347635 PYCARDQ9ULZ3 195 aa16.87■□□□□ 0.29
NUP50-201ENST00000347635 ZNF622Q969S3 477 aaKnown RBP eCLIP16.87■□□□□ 0.29
NUP50-201ENST00000347635 TRERF1Q96PN7 1200 aa16.87■□□□□ 0.29
NUP50-201ENST00000347635 CCDC87Q9NVE4 849 aa16.87■□□□□ 0.29
NUP50-201ENST00000347635 ELP1O95163 1332 aa16.87■□□□□ 0.29
NUP50-201ENST00000347635 CATIPQ7Z7H3 387 aa16.86■□□□□ 0.29
NUP50-201ENST00000347635 CTAGE1Q96RT6 745 aa16.86■□□□□ 0.29
NUP50-201ENST00000347635 KRT23Q9C075 422 aa16.86■□□□□ 0.29
NUP50-201ENST00000347635 RANBP6O60518 1105 aaKnown RBP16.86■□□□□ 0.29
NUP50-201ENST00000347635 SPA17Q15506 151 aa16.86■□□□□ 0.29
NUP50-201ENST00000347635 FAM98CQ17RN3 349 aaKnown RBP16.86■□□□□ 0.29
NUP50-201ENST00000347635 CRACR2BQ8N4Y2 399 aaPredicted RBP16.86■□□□□ 0.29
NUP50-201ENST00000347635 KIF20AO95235 890 aa16.86■□□□□ 0.29
NUP50-201ENST00000347635 MYL5Q02045 173 aa16.86■□□□□ 0.29
NUP50-201ENST00000347635 PDLIM2Q96JY6 352 aa16.86■□□□□ 0.29
NUP50-201ENST00000347635 MRVI1Q9Y6F6 885 aa16.86■□□□□ 0.29
NUP50-201ENST00000347635 LMAN1P49257 510 aa16.86■□□□□ 0.29
NUP50-201ENST00000347635 TMEM87AQ8NBN3 555 aa16.86■□□□□ 0.29
NUP50-201ENST00000347635 GOLGA6L10A6NI86 522 aa16.85■□□□□ 0.29
NUP50-201ENST00000347635 CNNM2Q9H8M5 875 aa16.85■□□□□ 0.29
NUP50-201ENST00000347635 KIAA0754O94854 1291 aa16.85■□□□□ 0.29
NUP50-201ENST00000347635 WTAPQ15007 396 aa16.85■□□□□ 0.29
NUP50-201ENST00000347635 SLC9C2Q5TAH2 1124 aa16.85■□□□□ 0.29
NUP50-201ENST00000347635 CLTCQ00610 1675 aaKnown RBP16.85■□□□□ 0.29
NUP50-201ENST00000347635 ZNF444Q8N0Y2 327 aaPredicted RBP16.85■□□□□ 0.29
NUP50-201ENST00000347635 NCOA3Q9Y6Q9 1424 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms