RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 PPARDQ03181 441 aa23.66■■□□□ 1.38
CMTM4-201ENST00000330687 DHX37Q8IY37 1157 aaKnown RBP23.66■■□□□ 1.38
CMTM4-201ENST00000330687 ARHGEF28Q8N1W1 1705 aaKnown RBP23.65■■□□□ 1.38
CMTM4-201ENST00000330687 UHRF1BP1LA0JNW5 1464 aa23.65■■□□□ 1.38
CMTM4-201ENST00000330687 CCDC151A5D8V7 595 aa23.65■■□□□ 1.38
CMTM4-201ENST00000330687 FAM212AQ96EL1 285 aa23.65■■□□□ 1.38
CMTM4-201ENST00000330687 MAP3K5Q99683 1374 aa23.65■■□□□ 1.38
CMTM4-201ENST00000330687 KRT32Q14532 448 aa23.65■■□□□ 1.38
CMTM4-201ENST00000330687 ZNF827Q17R98 1081 aa23.65■■□□□ 1.38
CMTM4-201ENST00000330687 DNAJC21Q5F1R6 531 aaKnown RBP23.65■■□□□ 1.38
CMTM4-201ENST00000330687 RIN2Q8WYP3 895 aaPredicted RBP23.65■■□□□ 1.38
CMTM4-201ENST00000330687 MAP3K2Q9Y2U5 619 aa23.65■■□□□ 1.38
CMTM4-201ENST00000330687 PLEKHG2Q9H7P9 1386 aa23.65■■□□□ 1.38
CMTM4-201ENST00000330687 CPLX1O14810 134 aa23.65■■□□□ 1.38
CMTM4-201ENST00000330687 KCNQ3O43525 872 aa23.65■■□□□ 1.38
CMTM4-201ENST00000330687 MYL5Q02045 173 aa23.65■■□□□ 1.38
CMTM4-201ENST00000330687 C8orf76Q96K31 380 aa23.65■■□□□ 1.38
CMTM4-201ENST00000330687 AATKQ6ZMQ8 1374 aa23.65■■□□□ 1.38
CMTM4-201ENST00000330687 A0A0G2JLW4 131 aa23.64■■□□□ 1.38
CMTM4-201ENST00000330687 ATP2B1P20020 1258 aa23.64■■□□□ 1.38
CMTM4-201ENST00000330687 NCAPHQ15003 741 aa23.64■■□□□ 1.38
CMTM4-201ENST00000330687 TTC19Q6DKK2 380 aaPredicted RBP23.64■■□□□ 1.38
CMTM4-201ENST00000330687 IL17REQ8NFR9 667 aa23.64■■□□□ 1.38
CMTM4-201ENST00000330687 TUBB4AP04350 444 aa23.64■■□□□ 1.37
CMTM4-201ENST00000330687 PFKFB1P16118 471 aa23.64■■□□□ 1.37
CMTM4-201ENST00000330687 SYKP43405 635 aa23.64■■□□□ 1.37
CMTM4-201ENST00000330687 HAND2P61296 217 aa23.64■■□□□ 1.37
CMTM4-201ENST00000330687 PSME1Q06323 249 aa23.64■■□□□ 1.37
CMTM4-201ENST00000330687 ADALQ6DHV7 355 aa23.64■■□□□ 1.37
CMTM4-201ENST00000330687 BANK1Q8NDB2 785 aa23.64■■□□□ 1.37
CMTM4-201ENST00000330687 GIGYF1O75420 1035 aaPredicted RBP23.63■■□□□ 1.37
CMTM4-201ENST00000330687 ZMYND10O75800 440 aa23.63■■□□□ 1.37
CMTM4-201ENST00000330687 SOWAHDA6NJG2 315 aa23.63■■□□□ 1.37
CMTM4-201ENST00000330687 KLHL10Q6JEL2 608 aa23.63■■□□□ 1.37
CMTM4-201ENST00000330687 HMG20BQ9P0W2 317 aa23.63■■□□□ 1.37
CMTM4-201ENST00000330687 CTDNEP1O95476 244 aa23.62■■□□□ 1.37
CMTM4-201ENST00000330687 LRRC31Q6UY01 552 aa23.62■■□□□ 1.37
CMTM4-201ENST00000330687 MRPL44Q9H9J2 332 aaKnown RBP23.62■■□□□ 1.37
CMTM4-201ENST00000330687 PTPRMP28827 1452 aa23.62■■□□□ 1.37
CMTM4-201ENST00000330687 VSNL1P62760 191 aa23.62■■□□□ 1.37
CMTM4-201ENST00000330687 BEND3Q5T5X7 828 aa23.62■■□□□ 1.37
CMTM4-201ENST00000330687 UBXN6Q9BZV1 441 aa23.62■■□□□ 1.37
CMTM4-201ENST00000330687 SLC52A1Q9NWF4 448 aa23.62■■□□□ 1.37
CMTM4-201ENST00000330687 RAI14Q9P0K7 980 aa23.62■■□□□ 1.37
CMTM4-201ENST00000330687 EDC4Q6P2E9 1401 aaKnown RBP23.62■■□□□ 1.37
CMTM4-201ENST00000330687 H0YHG0 523 aa23.62■■□□□ 1.37
CMTM4-201ENST00000330687 KIF5CO60282 957 aa23.62■■□□□ 1.37
CMTM4-201ENST00000330687 SASH1O94885 1247 aa23.62■■□□□ 1.37
CMTM4-201ENST00000330687 CASP8Q14790 479 aa23.62■■□□□ 1.37
CMTM4-201ENST00000330687 FKBP15Q5T1M5 1219 aa23.62■■□□□ 1.37
CMTM4-201ENST00000330687 YY1AP1Q9H869 796 aa23.62■■□□□ 1.37
CMTM4-201ENST00000330687 SMARCC1Q92922 1105 aaPredicted RBP23.61■■□□□ 1.37
CMTM4-201ENST00000330687 FBXW10Q5XX13 1052 aa23.61■■□□□ 1.37
CMTM4-201ENST00000330687 CCT5P48643 541 aa23.61■■□□□ 1.37
CMTM4-201ENST00000330687 BRD3Q15059 726 aa23.61■■□□□ 1.37
CMTM4-201ENST00000330687 NAA16Q6N069 864 aaPredicted RBP23.61■■□□□ 1.37
CMTM4-201ENST00000330687 RSRC2Q7L4I2 434 aaKnown RBP23.61■■□□□ 1.37
CMTM4-201ENST00000330687 VSTM4Q8IW00 320 aa23.6■■□□□ 1.37
CMTM4-201ENST00000330687 LINC00301Q8NCQ3 95 aa23.6■■□□□ 1.37
CMTM4-201ENST00000330687 KCND1Q9NSA2 647 aa23.6■■□□□ 1.37
CMTM4-201ENST00000330687 NEUROD6Q96NK8 337 aa23.6■■□□□ 1.37
CMTM4-201ENST00000330687 CLIC6Q96NY7 704 aa23.6■■□□□ 1.37
CMTM4-201ENST00000330687 BEND6Q5SZJ8 279 aaPredicted RBP23.59■■□□□ 1.37
CMTM4-201ENST00000330687 STOX1Q6ZVD7 989 aa23.59■■□□□ 1.37
CMTM4-201ENST00000330687 SRGAP1Q7Z6B7 1085 aa23.59■■□□□ 1.37
CMTM4-201ENST00000330687 ILDR1Q86SU0 546 aaPredicted RBP23.59■■□□□ 1.37
CMTM4-201ENST00000330687 KCNB2Q92953 911 aa23.59■■□□□ 1.37
CMTM4-201ENST00000330687 IFT172Q9UG01 1749 aa23.59■■□□□ 1.37
CMTM4-201ENST00000330687 CT47A1Q5JQC4 288 aaPredicted RBP23.59■■□□□ 1.37
CMTM4-201ENST00000330687 ANKRD20A12PQ8NF67 263 aa23.59■■□□□ 1.37
CMTM4-201ENST00000330687 CDC5LQ99459 802 aaKnown RBP23.59■■□□□ 1.37
CMTM4-201ENST00000330687 BRMS1Q9HCU9 246 aa23.59■■□□□ 1.37
CMTM4-201ENST00000330687 RNF40O75150 1001 aa23.58■■□□□ 1.37
CMTM4-201ENST00000330687 CCDC91Q7Z6B0 441 aa23.58■■□□□ 1.37
CMTM4-201ENST00000330687 ANKZF1Q9H8Y5 726 aa23.58■■□□□ 1.37
CMTM4-201ENST00000330687 PPLO60437 1756 aa23.58■■□□□ 1.36
CMTM4-201ENST00000330687 CUTAO60888 179 aa23.58■■□□□ 1.36
CMTM4-201ENST00000330687 ERLIN2O94905 339 aa23.58■■□□□ 1.36
CMTM4-201ENST00000330687 CCDC175P0C221 793 aa23.58■■□□□ 1.36
CMTM4-201ENST00000330687 RXRAP19793 462 aa23.58■■□□□ 1.36
CMTM4-201ENST00000330687 MAP2K2P36507 400 aa23.58■■□□□ 1.36
CMTM4-201ENST00000330687 ASXL2Q76L83 1435 aa23.57■■□□□ 1.36
CMTM4-201ENST00000330687 POLD4Q9HCU8 107 aa23.57■■□□□ 1.36
CMTM4-201ENST00000330687 ACEP12821 1306 aa23.57■■□□□ 1.36
CMTM4-201ENST00000330687 MROH1Q8NDA8 1641 aa23.57■■□□□ 1.36
CMTM4-201ENST00000330687 STX17P56962 302 aa23.57■■□□□ 1.36
CMTM4-201ENST00000330687 CORO7P57737 925 aa23.57■■□□□ 1.36
CMTM4-201ENST00000330687 DHX32Q7L7V1 743 aaKnown RBP23.57■■□□□ 1.36
CMTM4-201ENST00000330687 KCNG4Q8TDN1 519 aa23.57■■□□□ 1.36
CMTM4-201ENST00000330687 PSD3Q9NYI0 1048 aa23.57■■□□□ 1.36
CMTM4-201ENST00000330687 TADA2BQ86TJ2 420 aa23.56■■□□□ 1.36
CMTM4-201ENST00000330687 AFAP1L1Q8TED9 768 aa23.56■■□□□ 1.36
CMTM4-201ENST00000330687 SUCLG2Q96I99 432 aa23.56■■□□□ 1.36
CMTM4-201ENST00000330687 NFE2L3Q9Y4A8 694 aa23.56■■□□□ 1.36
CMTM4-201ENST00000330687 FOXN1O15353 648 aa23.56■■□□□ 1.36
CMTM4-201ENST00000330687 PFKFB2O60825 505 aa23.56■■□□□ 1.36
CMTM4-201ENST00000330687 PLEKHO1Q53GL0 409 aaPredicted RBP23.56■■□□□ 1.36
CMTM4-201ENST00000330687 CENPHQ9H3R5 247 aa23.56■■□□□ 1.36
CMTM4-201ENST00000330687 CTAGE15A4D2H0 777 aa23.56■■□□□ 1.36
CMTM4-201ENST00000330687 CTAGE8P0CG41 777 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms