RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 CERS5Q8N5B7 392 aa18.11■□□□□ 0.49
RPP40-201ENST00000319533 A0A1B0GUL6 1792 aa18.11■□□□□ 0.49
RPP40-201ENST00000319533 SNAP23O00161 211 aa18.1■□□□□ 0.49
RPP40-201ENST00000319533 IFIT5Q13325 482 aaKnown RBP18.1■□□□□ 0.49
RPP40-201ENST00000319533 PKN2Q16513 984 aaKnown RBP18.1■□□□□ 0.49
RPP40-201ENST00000319533 ZNF296Q8WUU4 475 aaPredicted RBP18.1■□□□□ 0.49
RPP40-201ENST00000319533 TAF5LO75529 589 aa18.09■□□□□ 0.49
RPP40-201ENST00000319533 TBC1D8O95759 1140 aa18.09■□□□□ 0.49
RPP40-201ENST00000319533 SREBF2Q12772 1141 aa18.09■□□□□ 0.49
RPP40-201ENST00000319533 DLGAP5Q15398 846 aa18.09■□□□□ 0.49
RPP40-201ENST00000319533 MAP3K11Q16584 847 aa18.09■□□□□ 0.49
RPP40-201ENST00000319533 MRS2Q9HD23 443 aa18.09■□□□□ 0.49
RPP40-201ENST00000319533 F6X3S4 739 aa18.08■□□□□ 0.48
RPP40-201ENST00000319533 GPR25O00155 361 aa18.08■□□□□ 0.48
RPP40-201ENST00000319533 SPRYD7Q5W111 196 aa18.08■□□□□ 0.48
RPP40-201ENST00000319533 HELBQ8NG08 1087 aaPredicted RBP18.08■□□□□ 0.48
RPP40-201ENST00000319533 DEFB129Q9H1M3 183 aa18.08■□□□□ 0.48
RPP40-201ENST00000319533 PPP2R3BQ9Y5P8 575 aa18.08■□□□□ 0.48
RPP40-201ENST00000319533 PDE4DIPQ5VU43 2346 aa18.07■□□□□ 0.48
RPP40-201ENST00000319533 EPHA10Q5JZY3 1008 aa18.07■□□□□ 0.48
RPP40-201ENST00000319533 LMBR1LQ6UX01 489 aa18.07■□□□□ 0.48
RPP40-201ENST00000319533 ZNF804AQ7Z570 1209 aa18.07■□□□□ 0.48
RPP40-201ENST00000319533 SPINK5Q9NQ38 1064 aaPredicted RBP18.07■□□□□ 0.48
RPP40-201ENST00000319533 HPS5Q9UPZ3 1129 aa18.07■□□□□ 0.48
RPP40-201ENST00000319533 SSC5DA1L4H1 1573 aa18.06■□□□□ 0.48
RPP40-201ENST00000319533 UNCXA6NJT0 531 aa18.06■□□□□ 0.48
RPP40-201ENST00000319533 GRM8O00222 908 aa18.06■□□□□ 0.48
RPP40-201ENST00000319533 SOX10P56693 466 aa18.06■□□□□ 0.48
RPP40-201ENST00000319533 ANGEL1Q9UNK9 670 aaKnown RBP18.06■□□□□ 0.48
RPP40-201ENST00000319533 ECM29Q5VYK3 1845 aa18.06■□□□□ 0.48
RPP40-201ENST00000319533 SPDYE2BA6NHP3 402 aa18.05■□□□□ 0.48
RPP40-201ENST00000319533 SPDYE6P0CI01 402 aa18.05■□□□□ 0.48
RPP40-201ENST00000319533 MKRN3Q13064 507 aaKnown RBP18.05■□□□□ 0.48
RPP40-201ENST00000319533 PRKG1Q13976 671 aa18.05■□□□□ 0.48
RPP40-201ENST00000319533 PCDHAC2Q9Y5I4 1007 aa18.05■□□□□ 0.48
RPP40-201ENST00000319533 LAMB1P07942 1786 aa18.04■□□□□ 0.48
RPP40-201ENST00000319533 FAM205AQ6ZU69 1335 aa18.04■□□□□ 0.48
RPP40-201ENST00000319533 ALDH1L1O75891 902 aa18.04■□□□□ 0.48
RPP40-201ENST00000319533 INHBEP58166 350 aa18.04■□□□□ 0.48
RPP40-201ENST00000319533 CCDC57Q2TAC2 916 aa18.04■□□□□ 0.48
RPP40-201ENST00000319533 CFAP100Q494V2 611 aa18.04■□□□□ 0.48
RPP40-201ENST00000319533 LDHAL6AQ6ZMR3 332 aa18.04■□□□□ 0.48
RPP40-201ENST00000319533 ZNF594Q96JF6 807 aaPredicted RBP18.04■□□□□ 0.48
RPP40-201ENST00000319533 PRMT6Q96LA8 375 aaPredicted RBP18.04■□□□□ 0.48
RPP40-201ENST00000319533 CHMP3Q9Y3E7 222 aa18.04■□□□□ 0.48
RPP40-201ENST00000319533 SALL2Q9Y467 1007 aaPredicted RBP18.04■□□□□ 0.48
RPP40-201ENST00000319533 MANSC4A6NHS7 340 aaPredicted RBP18.03■□□□□ 0.48
RPP40-201ENST00000319533 PPP1R12BO60237 982 aaPredicted RBP18.03■□□□□ 0.48
RPP40-201ENST00000319533 ALDH1A1P00352 501 aa18.03■□□□□ 0.48
RPP40-201ENST00000319533 ZBTB48P10074 688 aaPredicted RBP18.03■□□□□ 0.48
RPP40-201ENST00000319533 SLC10A4Q96EP9 437 aa18.03■□□□□ 0.48
RPP40-201ENST00000319533 R3HDMLQ9H3Y0 253 aa18.03■□□□□ 0.48
RPP40-201ENST00000319533 FZD1Q9UP38 647 aa18.03■□□□□ 0.48
RPP40-201ENST00000319533 MYO1BO43795 1136 aa18.02■□□□□ 0.48
RPP40-201ENST00000319533 FKTNO75072 461 aa18.02■□□□□ 0.48
RPP40-201ENST00000319533 SUPT20HL1Q3ZLR7 823 aa18.02■□□□□ 0.48
RPP40-201ENST00000319533 FBXO46Q6PJ61 603 aaPredicted RBP18.02■□□□□ 0.48
RPP40-201ENST00000319533 TDRD7Q8NHU6 1098 aaKnown RBP18.02■□□□□ 0.48
RPP40-201ENST00000319533 AOX1Q06278 1338 aa18.01■□□□□ 0.47
RPP40-201ENST00000319533 F8W031 263 aaPredicted RBP18.01■□□□□ 0.47
RPP40-201ENST00000319533 UBE4AQ14139 1066 aa18.01■□□□□ 0.47
RPP40-201ENST00000319533 KAZALD1Q96I82 304 aa18.01■□□□□ 0.47
RPP40-201ENST00000319533 WNK4Q96J92 1243 aa18.01■□□□□ 0.47
RPP40-201ENST00000319533 CLMNQ96JQ2 1002 aa18.01■□□□□ 0.47
RPP40-201ENST00000319533 CNNM1Q9NRU3 951 aa18.01■□□□□ 0.47
RPP40-201ENST00000319533 C9orf78Q9NZ63 289 aaPredicted RBP18.01■□□□□ 0.47
RPP40-201ENST00000319533 UTYO14607 1347 aa18■□□□□ 0.47
RPP40-201ENST00000319533 CLRN2A0PK11 232 aa18■□□□□ 0.47
RPP40-201ENST00000319533 C1QBPQ07021 282 aaKnown RBP18■□□□□ 0.47
RPP40-201ENST00000319533 TAF7LQ5H9L4 462 aa18■□□□□ 0.47
RPP40-201ENST00000319533 NBPF12Q5TAG4 269 aaPredicted RBP18■□□□□ 0.47
RPP40-201ENST00000319533 IFNL1Q8IU54 200 aa18■□□□□ 0.47
RPP40-201ENST00000319533 SRCIN1Q9C0H9 1055 aa18■□□□□ 0.47
RPP40-201ENST00000319533 SERPINA10Q9UK55 444 aa18■□□□□ 0.47
RPP40-201ENST00000319533 PLIN1O60240 522 aa17.99■□□□□ 0.47
RPP40-201ENST00000319533 USP2O75604 605 aaPredicted RBP17.99■□□□□ 0.47
RPP40-201ENST00000319533 RASA3Q14644 834 aa17.99■□□□□ 0.47
RPP40-201ENST00000319533 SPDYE2Q495Y8 402 aa17.99■□□□□ 0.47
RPP40-201ENST00000319533 FAM84BQ96KN1 310 aaPredicted RBP17.99■□□□□ 0.47
RPP40-201ENST00000319533 JAG2Q9Y219 1238 aa17.99■□□□□ 0.47
RPP40-201ENST00000319533 IGF2BP3O00425 579 aaKnown RBP eCLIP17.98■□□□□ 0.47
RPP40-201ENST00000319533 HIBADHP31937 336 aaKnown RBP17.98■□□□□ 0.47
RPP40-201ENST00000319533 SUCLG2Q96I99 432 aa17.98■□□□□ 0.47
RPP40-201ENST00000319533 VEZTQ9HBM0 779 aa17.98■□□□□ 0.47
RPP40-201ENST00000319533 RIPOR2Q9Y4F9 1068 aa17.98■□□□□ 0.47
RPP40-201ENST00000319533 ZNF521Q96K83 1311 aa17.98■□□□□ 0.47
RPP40-201ENST00000319533 TESPA1A2RU30 521 aaPredicted RBP17.97■□□□□ 0.47
RPP40-201ENST00000319533 GYG1P46976 350 aa17.97■□□□□ 0.47
RPP40-201ENST00000319533 IREB2P48200 963 aaKnown RBP17.97■□□□□ 0.47
RPP40-201ENST00000319533 TNFAIP1Q13829 316 aa17.97■□□□□ 0.47
RPP40-201ENST00000319533 RABL6Q3YEC7 729 aaPredicted RBP17.97■□□□□ 0.47
RPP40-201ENST00000319533 MFSD14BQ5SR56 506 aa17.97■□□□□ 0.47
RPP40-201ENST00000319533 ANKRD13AQ8IZ07 590 aa17.97■□□□□ 0.47
RPP40-201ENST00000319533 PUS3Q9BZE2 481 aaKnown RBP17.97■□□□□ 0.47
RPP40-201ENST00000319533 ZNF70Q9UC06 446 aaPredicted RBP17.97■□□□□ 0.47
RPP40-201ENST00000319533 MROH5Q6ZUA9 1318 aa17.97■□□□□ 0.47
RPP40-201ENST00000319533 ARAP2Q8WZ64 1704 aa17.96■□□□□ 0.47
RPP40-201ENST00000319533 NBPF7P0C2Y1 421 aaPredicted RBP17.96■□□□□ 0.47
RPP40-201ENST00000319533 GJA5P36382 358 aa17.96■□□□□ 0.47
RPP40-201ENST00000319533 RBM5P52756 815 aaKnown RBP eCLIP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 189.1 ms