RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 SERPINC1P01008 464 aa11.18□□□□□ -0.62
RPGR-201ENST00000318842 ADORA1P30542 326 aa11.18□□□□□ -0.62
RPGR-201ENST00000318842 SCARF1Q14162 830 aa11.18□□□□□ -0.62
RPGR-201ENST00000318842 ANKRD1Q15327 319 aa11.18□□□□□ -0.62
RPGR-201ENST00000318842 TOGARAM2Q6ZUX3 1019 aa11.18□□□□□ -0.62
RPGR-201ENST00000318842 SYNE4Q8N205 404 aa11.18□□□□□ -0.62
RPGR-201ENST00000318842 LINS1Q8NG48 757 aa11.18□□□□□ -0.62
RPGR-201ENST00000318842 CABLES1Q8TDN4 633 aa11.18□□□□□ -0.62
RPGR-201ENST00000318842 MRPS27Q92552 414 aaKnown RBP11.18□□□□□ -0.62
RPGR-201ENST00000318842 HSD3B7Q9H2F3 369 aa11.18□□□□□ -0.62
RPGR-201ENST00000318842 ANO10Q9NW15 660 aa11.18□□□□□ -0.62
RPGR-201ENST00000318842 RCOR1Q9UKL0 485 aa11.18□□□□□ -0.62
RPGR-201ENST00000318842 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.18□□□□□ -0.62
RPGR-201ENST00000318842 MCMDC2Q4G0Z9 681 aa11.18□□□□□ -0.62
RPGR-201ENST00000318842 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.18□□□□□ -0.62
RPGR-201ENST00000318842 FANCLQ9NW38 375 aa11.18□□□□□ -0.62
RPGR-201ENST00000318842 PUF60Q9UHX1 559 aaKnown RBP11.18□□□□□ -0.62
RPGR-201ENST00000318842 KLF18A0A0U1RQI7 1052 aa11.18□□□□□ -0.62
RPGR-201ENST00000318842 GOLGA8BA8MQT2 603 aa11.18□□□□□ -0.62
RPGR-201ENST00000318842 ZNF202O95125 648 aa11.18□□□□□ -0.62
RPGR-201ENST00000318842 PFKFB1P16118 471 aa11.18□□□□□ -0.62
RPGR-201ENST00000318842 FANCCQ00597 558 aa11.18□□□□□ -0.62
RPGR-201ENST00000318842 MTX1Q13505 466 aa11.18□□□□□ -0.62
RPGR-201ENST00000318842 NCAPHQ15003 741 aa11.18□□□□□ -0.62
RPGR-201ENST00000318842 ZBTB3Q9H5J0 574 aa11.18□□□□□ -0.62
RPGR-201ENST00000318842 NEO1Q92859 1461 aa11.17□□□□□ -0.62
RPGR-201ENST00000318842 CARMIL3Q8ND23 1372 aa11.17□□□□□ -0.62
RPGR-201ENST00000318842 HSPD1P10809 573 aaKnown RBP11.17□□□□□ -0.62
RPGR-201ENST00000318842 PSME1Q06323 249 aa11.17□□□□□ -0.62
RPGR-201ENST00000318842 FOXR1Q6PIV2 292 aa11.17□□□□□ -0.62
RPGR-201ENST00000318842 OSBP2Q969R2 916 aa11.17□□□□□ -0.62
RPGR-201ENST00000318842 GDAP1L1Q96MZ0 367 aa11.17□□□□□ -0.62
RPGR-201ENST00000318842 RABEP2Q9H5N1 569 aa11.17□□□□□ -0.62
RPGR-201ENST00000318842 KIAA1468Q9P260 1216 aa11.17□□□□□ -0.62
RPGR-201ENST00000318842 N4BP1O75113 896 aaKnown RBP11.17□□□□□ -0.62
RPGR-201ENST00000318842 SLC3A2P08195 630 aaKnown RBP11.17□□□□□ -0.62
RPGR-201ENST00000318842 DHX32Q7L7V1 743 aaKnown RBP11.17□□□□□ -0.62
RPGR-201ENST00000318842 ERC1Q8IUD2 1116 aa11.17□□□□□ -0.62
RPGR-201ENST00000318842 MNS1Q8NEH6 495 aa11.17□□□□□ -0.62
RPGR-201ENST00000318842 LZTFL1Q9NQ48 299 aa11.17□□□□□ -0.62
RPGR-201ENST00000318842 CEMIPQ8WUJ3 1361 aa11.16□□□□□ -0.62
RPGR-201ENST00000318842 TNRQ92752 1358 aa11.16□□□□□ -0.62
RPGR-201ENST00000318842 hCG_1642624A0A1W2PR95 340 aa11.16□□□□□ -0.62
RPGR-201ENST00000318842 SNAP23O00161 211 aa11.16□□□□□ -0.62
RPGR-201ENST00000318842 PFKFB2O60825 505 aa11.16□□□□□ -0.62
RPGR-201ENST00000318842 ALDH1L1O75891 902 aa11.16□□□□□ -0.62
RPGR-201ENST00000318842 EVCP57679 992 aa11.16□□□□□ -0.62
RPGR-201ENST00000318842 GABPB1Q06547 395 aaPredicted RBP11.16□□□□□ -0.62
RPGR-201ENST00000318842 SEC31BQ9NQW1 1179 aa11.16□□□□□ -0.62
RPGR-201ENST00000318842 ORC3Q9UBD5 711 aaPredicted RBP11.16□□□□□ -0.62
RPGR-201ENST00000318842 PIK3C2AO00443 1686 aa11.16□□□□□ -0.62
RPGR-201ENST00000318842 MAST3O60307 1309 aa11.16□□□□□ -0.62
RPGR-201ENST00000318842 RGPD2P0DJD1 1756 aa11.16□□□□□ -0.62
RPGR-201ENST00000318842 CHRNA2Q15822 529 aa11.16□□□□□ -0.62
RPGR-201ENST00000318842 FOXP4Q8IVH2 680 aaPredicted RBP11.16□□□□□ -0.62
RPGR-201ENST00000318842 LINC00301Q8NCQ3 95 aa11.16□□□□□ -0.62
RPGR-201ENST00000318842 SMARCC2Q8TAQ2 1214 aa11.16□□□□□ -0.62
RPGR-201ENST00000318842 UBXN4Q92575 508 aa11.16□□□□□ -0.62
RPGR-201ENST00000318842 STAMQ92783 540 aa11.16□□□□□ -0.62
RPGR-201ENST00000318842 C8orf76Q96K31 380 aa11.16□□□□□ -0.62
RPGR-201ENST00000318842 INTS13Q9NVM9 706 aa11.16□□□□□ -0.62
RPGR-201ENST00000318842 TFR2Q9UP52 801 aa11.16□□□□□ -0.62
RPGR-201ENST00000318842 HTATSF1O43719 755 aaKnown RBP11.15□□□□□ -0.62
RPGR-201ENST00000318842 H2AFXP16104 143 aaPredicted RBP11.15□□□□□ -0.62
RPGR-201ENST00000318842 OAS2P29728 719 aaKnown RBP11.15□□□□□ -0.62
RPGR-201ENST00000318842 STX17P56962 302 aa11.15□□□□□ -0.62
RPGR-201ENST00000318842 GNG11P61952 73 aa11.15□□□□□ -0.62
RPGR-201ENST00000318842 SARM1Q6SZW1 724 aa11.15□□□□□ -0.62
RPGR-201ENST00000318842 KRBA2Q6ZNG9 492 aa11.15□□□□□ -0.62
RPGR-201ENST00000318842 MICU3Q86XE3 530 aa11.15□□□□□ -0.62
RPGR-201ENST00000318842 ANKRD24Q8TF21 1146 aa11.15□□□□□ -0.62
RPGR-201ENST00000318842 NLRP2Q9NX02 1062 aa11.15□□□□□ -0.62
RPGR-201ENST00000318842 AGLP35573 1532 aa11.15□□□□□ -0.62
RPGR-201ENST00000318842 SPTLC2O15270 562 aa11.15□□□□□ -0.62
RPGR-201ENST00000318842 UBASH3AP57075 661 aa11.15□□□□□ -0.62
RPGR-201ENST00000318842 KLHL10Q6JEL2 608 aa11.15□□□□□ -0.62
RPGR-201ENST00000318842 TRIM65Q6PJ69 517 aa11.15□□□□□ -0.62
RPGR-201ENST00000318842 TTLL7Q6ZT98 887 aa11.15□□□□□ -0.62
RPGR-201ENST00000318842 C10orf67Q8IYJ2 551 aa11.15□□□□□ -0.62
RPGR-201ENST00000318842 SMYD4Q8IYR2 804 aaPredicted RBP11.15□□□□□ -0.62
RPGR-201ENST00000318842 PAG1Q9NWQ8 432 aa11.15□□□□□ -0.62
RPGR-201ENST00000318842 H3BQF6 201 aa11.15□□□□□ -0.63
RPGR-201ENST00000318842 SMIM22K7EJ46 135 aa11.15□□□□□ -0.63
RPGR-201ENST00000318842 BMP6P22004 513 aa11.15□□□□□ -0.63
RPGR-201ENST00000318842 RFX5P48382 616 aaPredicted RBP11.15□□□□□ -0.63
RPGR-201ENST00000318842 MCM6Q14566 821 aa11.15□□□□□ -0.63
RPGR-201ENST00000318842 TIGD1Q96MW7 591 aa11.15□□□□□ -0.63
RPGR-201ENST00000318842 ZKSCAN3Q9BRR0 538 aa11.15□□□□□ -0.63
RPGR-201ENST00000318842 FMN2Q9NZ56 1722 aa11.15□□□□□ -0.63
RPGR-201ENST00000318842 FOXP2O15409 715 aa11.14□□□□□ -0.63
RPGR-201ENST00000318842 PRR29P0C7W0 189 aa11.14□□□□□ -0.63
RPGR-201ENST00000318842 RAD51AP2Q09MP3 1159 aa11.14□□□□□ -0.63
RPGR-201ENST00000318842 USP49Q70CQ1 688 aa11.14□□□□□ -0.63
RPGR-201ENST00000318842 EEF2KMTQ96G04 330 aa11.14□□□□□ -0.63
RPGR-201ENST00000318842 NEXNQ0ZGT2 675 aa11.14□□□□□ -0.63
RPGR-201ENST00000318842 AKAP4Q5JQC9 854 aa11.14□□□□□ -0.63
RPGR-201ENST00000318842 FKBP15Q5T1M5 1219 aa11.14□□□□□ -0.63
RPGR-201ENST00000318842 USPL1Q5W0Q7 1092 aa11.14□□□□□ -0.63
RPGR-201ENST00000318842 ANKRD13DQ6ZTN6 518 aa11.14□□□□□ -0.63
RPGR-201ENST00000318842 IP6K1Q92551 441 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms