RNA–Protein interactions for RNA: ENST00000259803.7

GCM1-201, Transcript of glial cells missing homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCM1, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1-201ENST00000259803 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.47□□□□□ -0.41
GCM1-201ENST00000259803 USP31Q70CQ4 1352 aa12.47□□□□□ -0.41
GCM1-201ENST00000259803 HOXA10P31260 410 aaPredicted RBP12.47□□□□□ -0.41
GCM1-201ENST00000259803 ATICP31939 592 aa12.47□□□□□ -0.41
GCM1-201ENST00000259803 GOLGA2Q08379 1002 aa12.47□□□□□ -0.41
GCM1-201ENST00000259803 COL19A1Q14993 1142 aa12.47□□□□□ -0.41
GCM1-201ENST00000259803 PPM1EQ8WY54 764 aa12.47□□□□□ -0.41
GCM1-201ENST00000259803 TRIM11Q96F44 468 aa12.47□□□□□ -0.41
GCM1-201ENST00000259803 PDLIM2Q96JY6 352 aa12.47□□□□□ -0.41
GCM1-201ENST00000259803 CCDC39Q9UFE4 941 aa12.47□□□□□ -0.41
GCM1-201ENST00000259803 HMOX1P09601 288 aa12.46□□□□□ -0.41
GCM1-201ENST00000259803 ZNF132P52740 706 aa12.46□□□□□ -0.41
GCM1-201ENST00000259803 PKN1Q16512 942 aa12.46□□□□□ -0.41
GCM1-201ENST00000259803 ANTXR1Q9H6X2 564 aa12.46□□□□□ -0.41
GCM1-201ENST00000259803 BTG4Q9NY30 223 aa12.46□□□□□ -0.41
GCM1-201ENST00000259803 CTIFO43310 598 aaKnown RBP12.46□□□□□ -0.42
GCM1-201ENST00000259803 HOXC9P31274 260 aa12.46□□□□□ -0.42
GCM1-201ENST00000259803 SFSWAPQ12872 951 aaKnown RBP12.46□□□□□ -0.42
GCM1-201ENST00000259803 GPATCH3Q96I76 525 aa12.46□□□□□ -0.42
GCM1-201ENST00000259803 FAM81BQ96LP2 452 aa12.46□□□□□ -0.42
GCM1-201ENST00000259803 TBC1D7Q9P0N9 293 aa12.46□□□□□ -0.42
GCM1-201ENST00000259803 LRP6O75581 1613 aa12.46□□□□□ -0.42
GCM1-201ENST00000259803 MYO1BO43795 1136 aa12.45□□□□□ -0.42
GCM1-201ENST00000259803 MMEP08473 750 aa12.45□□□□□ -0.42
GCM1-201ENST00000259803 UBE2Q1Q7Z7E8 422 aa12.45□□□□□ -0.42
GCM1-201ENST00000259803 GIMAP7Q8NHV1 300 aa12.45□□□□□ -0.42
GCM1-201ENST00000259803 GPT2Q8TD30 523 aa12.45□□□□□ -0.42
GCM1-201ENST00000259803 KCNB2Q92953 911 aa12.45□□□□□ -0.42
GCM1-201ENST00000259803 NPC1L1Q9UHC9 1359 aa12.45□□□□□ -0.42
GCM1-201ENST00000259803 MAP2P11137 1827 aaKnown RBP12.45□□□□□ -0.42
GCM1-201ENST00000259803 AP1G2O75843 785 aa12.45□□□□□ -0.42
GCM1-201ENST00000259803 PECAM1P16284 738 aaPredicted RBP12.45□□□□□ -0.42
GCM1-201ENST00000259803 SAPCD2Q86UD0 394 aa12.45□□□□□ -0.42
GCM1-201ENST00000259803 JARID2Q92833 1246 aaPredicted RBP12.45□□□□□ -0.42
GCM1-201ENST00000259803 FAM53CQ9NYF3 392 aa12.45□□□□□ -0.42
GCM1-201ENST00000259803 RRP15Q9Y3B9 282 aaKnown RBP12.45□□□□□ -0.42
GCM1-201ENST00000259803 NFAT5O94916 1531 aa12.44□□□□□ -0.42
GCM1-201ENST00000259803 CHMLP26374 656 aa12.44□□□□□ -0.42
GCM1-201ENST00000259803 DEUP1Q05D60 604 aa12.44□□□□□ -0.42
GCM1-201ENST00000259803 CCDC92Q53HC0 331 aaPredicted RBP12.44□□□□□ -0.42
GCM1-201ENST00000259803 CCDC146Q8IYE0 955 aa12.44□□□□□ -0.42
GCM1-201ENST00000259803 DIAPH3Q9NSV4 1193 aa12.44□□□□□ -0.42
GCM1-201ENST00000259803 BARX2Q9UMQ3 279 aaPredicted RBP12.44□□□□□ -0.42
GCM1-201ENST00000259803 NSD2O96028 1365 aa12.44□□□□□ -0.42
GCM1-201ENST00000259803 JCADQ9P266 1359 aa12.44□□□□□ -0.42
GCM1-201ENST00000259803 PEAK1Q9H792 1746 aa12.44□□□□□ -0.42
GCM1-201ENST00000259803 EIF4A2Q14240 407 aaKnown RBP12.44□□□□□ -0.42
GCM1-201ENST00000259803 CLASRPQ8N2M8 674 aaKnown RBP12.44□□□□□ -0.42
GCM1-201ENST00000259803 KIF18AQ8NI77 898 aa12.44□□□□□ -0.42
GCM1-201ENST00000259803 MKS1Q9NXB0 559 aa12.44□□□□□ -0.42
GCM1-201ENST00000259803 PPP1R1BQ9UD71 204 aaPredicted RBP12.44□□□□□ -0.42
GCM1-201ENST00000259803 KLF15Q9UIH9 416 aa12.44□□□□□ -0.42
GCM1-201ENST00000259803 SGSM2O43147 1006 aa12.43□□□□□ -0.42
GCM1-201ENST00000259803 GAS2L3Q86XJ1 694 aa12.43□□□□□ -0.42
GCM1-201ENST00000259803 KCNH5Q8NCM2 988 aa12.43□□□□□ -0.42
GCM1-201ENST00000259803 NGLY1Q96IV0 654 aa12.43□□□□□ -0.42
GCM1-201ENST00000259803 PAGR1Q9BTK6 254 aa12.43□□□□□ -0.42
GCM1-201ENST00000259803 ATP8A1Q9Y2Q0 1164 aa12.43□□□□□ -0.42
GCM1-201ENST00000259803 ARMC3Q5W041 872 aa12.43□□□□□ -0.42
GCM1-201ENST00000259803 CCDC80Q76M96 950 aa12.43□□□□□ -0.42
GCM1-201ENST00000259803 SKAP1Q86WV1 359 aa12.43□□□□□ -0.42
GCM1-201ENST00000259803 HDAC7Q8WUI4 952 aa12.43□□□□□ -0.42
GCM1-201ENST00000259803 MRFAP1L1Q96HT8 127 aa12.43□□□□□ -0.42
GCM1-201ENST00000259803 BAG1Q99933 345 aaPredicted RBP12.43□□□□□ -0.42
GCM1-201ENST00000259803 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.43□□□□□ -0.42
GCM1-201ENST00000259803 PICK1Q9NRD5 415 aa12.43□□□□□ -0.42
GCM1-201ENST00000259803 CPP00450 1065 aa12.42□□□□□ -0.42
GCM1-201ENST00000259803 MYL1P05976 194 aa12.42□□□□□ -0.42
GCM1-201ENST00000259803 HARSP12081 509 aaKnown RBP12.42□□□□□ -0.42
GCM1-201ENST00000259803 LARP1Q6PKG0 1096 aaKnown RBP12.42□□□□□ -0.42
GCM1-201ENST00000259803 TBC1D5Q92609 795 aa12.42□□□□□ -0.42
GCM1-201ENST00000259803 IRX2Q9BZI1 471 aaPredicted RBP12.42□□□□□ -0.42
GCM1-201ENST00000259803 HOXC10Q9NYD6 342 aa12.42□□□□□ -0.42
GCM1-201ENST00000259803 ODF2LQ9ULJ1 636 aa12.42□□□□□ -0.42
GCM1-201ENST00000259803 ADAMTS8Q9UP79 889 aa12.42□□□□□ -0.42
GCM1-201ENST00000259803 TRIM37O94972 964 aa12.42□□□□□ -0.42
GCM1-201ENST00000259803 SMARCA1P28370 1054 aa12.42□□□□□ -0.42
GCM1-201ENST00000259803 USP8P40818 1118 aa12.42□□□□□ -0.42
GCM1-201ENST00000259803 MEX3CQ5U5Q3 659 aaKnown RBP12.42□□□□□ -0.42
GCM1-201ENST00000259803 CCDC191Q8NCU4 936 aa12.42□□□□□ -0.42
GCM1-201ENST00000259803 IFT122Q9HBG6 1241 aa12.42□□□□□ -0.42
GCM1-201ENST00000259803 TMEM63CQ9P1W3 806 aa12.42□□□□□ -0.42
GCM1-201ENST00000259803 LCMT1Q9UIC8 334 aa12.42□□□□□ -0.42
GCM1-201ENST00000259803 FAN1Q9Y2M0 1017 aa12.42□□□□□ -0.42
GCM1-201ENST00000259803 UTRNP46939 3433 aa12.42□□□□□ -0.42
GCM1-201ENST00000259803 GCFC2P16383 781 aaKnown RBP12.41□□□□□ -0.42
GCM1-201ENST00000259803 CYP11B2P19099 503 aa12.41□□□□□ -0.42
GCM1-201ENST00000259803 HOXD10P28358 340 aa12.41□□□□□ -0.42
GCM1-201ENST00000259803 CRYMQ14894 314 aa12.41□□□□□ -0.42
GCM1-201ENST00000259803 SKOR2Q2VWA4 1001 aaPredicted RBP12.41□□□□□ -0.42
GCM1-201ENST00000259803 ANKRD24Q8TF21 1146 aa12.41□□□□□ -0.42
GCM1-201ENST00000259803 E2F6O75461 281 aa12.41□□□□□ -0.42
GCM1-201ENST00000259803 TMEM110Q86TL2 294 aa12.41□□□□□ -0.42
GCM1-201ENST00000259803 NBPF15Q8N660 670 aa12.41□□□□□ -0.42
GCM1-201ENST00000259803 PYGLP06737 847 aa12.41□□□□□ -0.42
GCM1-201ENST00000259803 NSUN2Q08J23 767 aaKnown RBP eCLIP12.41□□□□□ -0.42
GCM1-201ENST00000259803 LMNTD2Q8IXW0 634 aa12.41□□□□□ -0.42
GCM1-201ENST00000259803 IP6K1Q92551 441 aa12.41□□□□□ -0.42
GCM1-201ENST00000259803 GINM1Q9NU53 330 aa12.41□□□□□ -0.42
GCM1-201ENST00000259803 NLRP2Q9NX02 1062 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms