RNA–Protein interactions for RNA: ENST00000259008.6

BRIP1-201, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRIP1, Length 6,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-201ENST00000259008 PUF60Q9UHX1 559 aaKnown RBP7.35□□□□□ -1.23
BRIP1-201ENST00000259008 CFAP45Q9UL16 551 aa7.35□□□□□ -1.23
BRIP1-201ENST00000259008 WDR33Q9C0J8 1336 aaKnown RBP7.35□□□□□ -1.23
BRIP1-201ENST00000259008 NOP56O00567 594 aaKnown RBP7.34□□□□□ -1.23
BRIP1-201ENST00000259008 IDEP14735 1019 aa7.34□□□□□ -1.23
BRIP1-201ENST00000259008 CHRNDQ07001 517 aa7.34□□□□□ -1.23
BRIP1-201ENST00000259008 SMARCE1Q969G3 411 aa7.34□□□□□ -1.23
BRIP1-201ENST00000259008 PRDM1O75626 825 aa7.34□□□□□ -1.23
BRIP1-201ENST00000259008 ENOX2Q16206 610 aaKnown RBP7.34□□□□□ -1.23
BRIP1-201ENST00000259008 TBC1D9Q6ZT07 1266 aa7.34□□□□□ -1.23
BRIP1-201ENST00000259008 NCAPG2Q86XI2 1143 aa7.34□□□□□ -1.23
BRIP1-201ENST00000259008 UIMC1Q96RL1 719 aa7.34□□□□□ -1.23
BRIP1-201ENST00000259008 DDX39AO00148 427 aaKnown RBP7.34□□□□□ -1.23
BRIP1-201ENST00000259008 TRAF1Q13077 416 aa7.34□□□□□ -1.23
BRIP1-201ENST00000259008 CAMK4Q16566 473 aa7.34□□□□□ -1.23
BRIP1-201ENST00000259008 TNNI3KQ59H18 835 aa7.34□□□□□ -1.23
BRIP1-201ENST00000259008 AKNAD1Q5T1N1 836 aa7.34□□□□□ -1.23
BRIP1-201ENST00000259008 CCDC129Q6ZRS4 1044 aa7.34□□□□□ -1.23
BRIP1-201ENST00000259008 TCP11L1Q9NUJ3 509 aa7.34□□□□□ -1.23
BRIP1-201ENST00000259008 FPGT-TNNI3KV9GXZ4 949 aa7.34□□□□□ -1.23
BRIP1-201ENST00000259008 CHMP2AO43633 222 aa7.34□□□□□ -1.23
BRIP1-201ENST00000259008 BCAMP50895 628 aa7.34□□□□□ -1.23
BRIP1-201ENST00000259008 SKIDA1Q1XH10 827 aa7.34□□□□□ -1.23
BRIP1-201ENST00000259008 DEFB132Q7Z7B7 95 aa7.34□□□□□ -1.23
BRIP1-201ENST00000259008 KIF20AO95235 890 aa7.33□□□□□ -1.24
BRIP1-201ENST00000259008 DCAF15Q66K64 600 aa7.33□□□□□ -1.24
BRIP1-201ENST00000259008 NSMFQ6X4W1 530 aa7.33□□□□□ -1.24
BRIP1-201ENST00000259008 DPH6Q7L8W6 267 aa7.33□□□□□ -1.24
BRIP1-201ENST00000259008 NEURL1BA8MQ27 555 aa7.33□□□□□ -1.24
BRIP1-201ENST00000259008 TBCAO75347 108 aaKnown RBP7.33□□□□□ -1.24
BRIP1-201ENST00000259008 GIGYF1O75420 1035 aaPredicted RBP7.33□□□□□ -1.24
BRIP1-201ENST00000259008 TAF12Q16514 161 aa7.33□□□□□ -1.24
BRIP1-201ENST00000259008 TTC22Q5TAA0 569 aa7.33□□□□□ -1.24
BRIP1-201ENST00000259008 TBC1D22AQ8WUA7 517 aa7.33□□□□□ -1.24
BRIP1-201ENST00000259008 TCHPQ9BT92 498 aa7.33□□□□□ -1.24
BRIP1-201ENST00000259008 TRIM5Q9C035 493 aa7.33□□□□□ -1.24
BRIP1-201ENST00000259008 ZNHIT6Q9NWK9 470 aaKnown RBP7.33□□□□□ -1.24
BRIP1-201ENST00000259008 ORC3Q9UBD5 711 aaPredicted RBP7.33□□□□□ -1.24
BRIP1-201ENST00000259008 ABCA9Q8IUA7 1624 aa7.33□□□□□ -1.24
BRIP1-201ENST00000259008 NFKBIBQ15653 356 aa7.33□□□□□ -1.24
BRIP1-201ENST00000259008 ZBTB38Q8NAP3 1195 aaPredicted RBP7.33□□□□□ -1.24
BRIP1-201ENST00000259008 PRC1O43663 620 aa7.33□□□□□ -1.24
BRIP1-201ENST00000259008 POTEJP0CG39 1038 aa7.33□□□□□ -1.24
BRIP1-201ENST00000259008 NPR1P16066 1061 aa7.33□□□□□ -1.24
BRIP1-201ENST00000259008 CTDSPL2Q05D32 466 aa7.33□□□□□ -1.24
BRIP1-201ENST00000259008 ARHGAP45Q92619 1136 aa7.33□□□□□ -1.24
BRIP1-201ENST00000259008 BRF1Q92994 677 aa7.33□□□□□ -1.24
BRIP1-201ENST00000259008 FERMT2Q96AC1 680 aa7.33□□□□□ -1.24
BRIP1-201ENST00000259008 DBNDD2Q9BQY9 259 aa7.33□□□□□ -1.24
BRIP1-201ENST00000259008 C6orf50Q9HD87 102 aa7.33□□□□□ -1.24
BRIP1-201ENST00000259008 TSHZ2Q9NRE2 1034 aa7.33□□□□□ -1.24
BRIP1-201ENST00000259008 ZNF277Q9NRM2 450 aaPredicted RBP7.33□□□□□ -1.24
BRIP1-201ENST00000259008 TET3O43151 1660 aa7.33□□□□□ -1.24
BRIP1-201ENST00000259008 ZNF804BA4D1E1 1349 aa7.33□□□□□ -1.24
BRIP1-201ENST00000259008 A0A0G2JLW4 131 aa7.33□□□□□ -1.24
BRIP1-201ENST00000259008 RDXP35241 583 aaKnown RBP7.33□□□□□ -1.24
BRIP1-201ENST00000259008 CIAPIN1Q6FI81 312 aa7.33□□□□□ -1.24
BRIP1-201ENST00000259008 RTKN2Q8IZC4 609 aa7.33□□□□□ -1.24
BRIP1-201ENST00000259008 MASTLQ96GX5 879 aa7.33□□□□□ -1.24
BRIP1-201ENST00000259008 GREM2Q9H772 168 aa7.33□□□□□ -1.24
BRIP1-201ENST00000259008 GPBP1L1Q9HC44 474 aaPredicted RBP7.33□□□□□ -1.24
BRIP1-201ENST00000259008 TBC1D10BQ4KMP7 808 aaPredicted RBP7.32□□□□□ -1.24
BRIP1-201ENST00000259008 C2orf69Q8N8R5 385 aa7.32□□□□□ -1.24
BRIP1-201ENST00000259008 CCDC148Q8NFR7 591 aa7.32□□□□□ -1.24
BRIP1-201ENST00000259008 ERMNQ8TAM6 284 aa7.32□□□□□ -1.24
BRIP1-201ENST00000259008 SEC31BQ9NQW1 1179 aa7.32□□□□□ -1.24
BRIP1-201ENST00000259008 AXIN2Q9Y2T1 843 aa7.32□□□□□ -1.24
BRIP1-201ENST00000259008 XDHP47989 1333 aa7.32□□□□□ -1.24
BRIP1-201ENST00000259008 IL6STP40189 918 aaPredicted RBP7.32□□□□□ -1.24
BRIP1-201ENST00000259008 USP8P40818 1118 aa7.32□□□□□ -1.24
BRIP1-201ENST00000259008 CCDC173Q0VFZ6 552 aa7.32□□□□□ -1.24
BRIP1-201ENST00000259008 VPS72Q15906 364 aa7.32□□□□□ -1.24
BRIP1-201ENST00000259008 TCERG1LQ5VWI1 586 aa7.32□□□□□ -1.24
BRIP1-201ENST00000259008 CEP85Q6P2H3 762 aa7.32□□□□□ -1.24
BRIP1-201ENST00000259008 Q6ZUG5 572 aa7.32□□□□□ -1.24
BRIP1-201ENST00000259008 DHX37Q8IY37 1157 aaKnown RBP7.32□□□□□ -1.24
BRIP1-201ENST00000259008 FBXO41Q8TF61 875 aa7.32□□□□□ -1.24
BRIP1-201ENST00000259008 SLC5A4Q9NY91 659 aa7.32□□□□□ -1.24
BRIP1-201ENST00000259008 PRKAG2Q9UGJ0 569 aa7.32□□□□□ -1.24
BRIP1-201ENST00000259008 RTL9Q8NET4 1388 aa7.32□□□□□ -1.24
BRIP1-201ENST00000259008 ADGRB3O60242 1522 aa7.32□□□□□ -1.24
BRIP1-201ENST00000259008 CALML3P27482 149 aa7.32□□□□□ -1.24
BRIP1-201ENST00000259008 BTDP43251 543 aa7.32□□□□□ -1.24
BRIP1-201ENST00000259008 RBM8AQ9Y5S9 174 aaKnown RBP7.32□□□□□ -1.24
BRIP1-201ENST00000259008 BLMP54132 1417 aaPredicted RBP7.32□□□□□ -1.24
BRIP1-201ENST00000259008 NBPF7P0C2Y1 421 aaPredicted RBP7.32□□□□□ -1.24
BRIP1-201ENST00000259008 EIF5P55010 431 aaKnown RBP7.32□□□□□ -1.24
BRIP1-201ENST00000259008 ARHGEF6Q15052 776 aa7.32□□□□□ -1.24
BRIP1-201ENST00000259008 AOC3Q16853 763 aa7.32□□□□□ -1.24
BRIP1-201ENST00000259008 SLC27A3Q5K4L6 730 aa7.32□□□□□ -1.24
BRIP1-201ENST00000259008 PPFIBP1Q86W92 1011 aa7.32□□□□□ -1.24
BRIP1-201ENST00000259008 SPC25Q9HBM1 224 aa7.32□□□□□ -1.24
BRIP1-201ENST00000259008 CHRNA5P30532 468 aa7.32□□□□□ -1.24
BRIP1-201ENST00000259008 SLC1A4P43007 532 aa7.32□□□□□ -1.24
BRIP1-201ENST00000259008 ZAP70P43403 619 aa7.32□□□□□ -1.24
BRIP1-201ENST00000259008 GNAQP50148 359 aa7.32□□□□□ -1.24
BRIP1-201ENST00000259008 DEKP35659 375 aaKnown RBP7.31□□□□□ -1.24
BRIP1-201ENST00000259008 MIGA2Q7L4E1 593 aa7.31□□□□□ -1.24
BRIP1-201ENST00000259008 ANKRD44Q8N8A2 993 aa7.31□□□□□ -1.24
BRIP1-201ENST00000259008 PARD3Q8TEW0 1356 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms