RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 XRCC3O43542 346 aa10.24□□□□□ -0.77
LINC00339-213ENST00000642137 TPPPO94811 219 aa10.24□□□□□ -0.77
LINC00339-213ENST00000642137 EIF4EP06730 217 aaKnown RBP10.24□□□□□ -0.77
LINC00339-213ENST00000642137 HEXAP06865 529 aa10.24□□□□□ -0.77
LINC00339-213ENST00000642137 ELK1P19419 428 aa10.24□□□□□ -0.77
LINC00339-213ENST00000642137 CHATP28329 748 aa10.24□□□□□ -0.77
LINC00339-213ENST00000642137 MOGAT2Q3SYC2 334 aa10.24□□□□□ -0.77
LINC00339-213ENST00000642137 PAN3Q58A45 887 aaKnown RBP10.24□□□□□ -0.77
LINC00339-213ENST00000642137 FAM216BQ8N7L0 139 aa10.24□□□□□ -0.77
LINC00339-213ENST00000642137 ASCC1Q8N9N2 400 aaKnown RBP10.24□□□□□ -0.77
LINC00339-213ENST00000642137 OR4S1Q8NGB4 309 aa10.24□□□□□ -0.77
LINC00339-213ENST00000642137 RAB3CQ96E17 227 aa10.24□□□□□ -0.77
LINC00339-213ENST00000642137 DPCDQ9BVM2 203 aaPredicted RBP10.24□□□□□ -0.77
LINC00339-213ENST00000642137 PECRQ9BY49 303 aa10.24□□□□□ -0.77
LINC00339-213ENST00000642137 REG4Q9BYZ8 158 aa10.24□□□□□ -0.77
LINC00339-213ENST00000642137 NARFLQ9H6Q4 476 aa10.24□□□□□ -0.77
LINC00339-213ENST00000642137 ZNF581Q9P0T4 197 aa10.24□□□□□ -0.77
LINC00339-213ENST00000642137 SLC25A10Q9UBX3 287 aaPredicted RBP10.24□□□□□ -0.77
LINC00339-213ENST00000642137 ITGB1BP2Q9UKP3 347 aa10.24□□□□□ -0.77
LINC00339-213ENST00000642137 ABCA12Q86UK0 2595 aa10.24□□□□□ -0.77
LINC00339-213ENST00000642137 UNC79Q9P2D8 2635 aa10.23□□□□□ -0.77
LINC00339-213ENST00000642137 A0A1B0GW55 424 aa10.23□□□□□ -0.77
LINC00339-213ENST00000642137 FUOMA2VDF0 154 aa10.23□□□□□ -0.77
LINC00339-213ENST00000642137 MGST3O14880 152 aa10.23□□□□□ -0.77
LINC00339-213ENST00000642137 CA11O75493 328 aa10.23□□□□□ -0.77
LINC00339-213ENST00000642137 CLPXO76031 633 aa10.23□□□□□ -0.77
LINC00339-213ENST00000642137 CSN2P05814 226 aa10.23□□□□□ -0.77
LINC00339-213ENST00000642137 DUX4L2P0CJ85 424 aa10.23□□□□□ -0.77
LINC00339-213ENST00000642137 DUX4L3P0CJ86 424 aa10.23□□□□□ -0.77
LINC00339-213ENST00000642137 DUX4L4P0CJ87 422 aa10.23□□□□□ -0.77
LINC00339-213ENST00000642137 DUX4L5P0CJ88 424 aa10.23□□□□□ -0.77
LINC00339-213ENST00000642137 DUX4L6P0CJ89 424 aa10.23□□□□□ -0.77
LINC00339-213ENST00000642137 DUX4L7P0CJ90 424 aa10.23□□□□□ -0.77
LINC00339-213ENST00000642137 CDK2P24941 298 aa10.23□□□□□ -0.77
LINC00339-213ENST00000642137 ERP29P30040 261 aaKnown RBP10.23□□□□□ -0.77
LINC00339-213ENST00000642137 TNFSF8P32971 234 aa10.23□□□□□ -0.77
LINC00339-213ENST00000642137 S100A5P33763 92 aa10.23□□□□□ -0.77
LINC00339-213ENST00000642137 OR3A1P47881 315 aa10.23□□□□□ -0.77
LINC00339-213ENST00000642137 PAX5Q02548 391 aa10.23□□□□□ -0.77
LINC00339-213ENST00000642137 GRK1Q15835 563 aa10.23□□□□□ -0.77
LINC00339-213ENST00000642137 ZNF260Q3ZCT1 412 aa10.23□□□□□ -0.77
LINC00339-213ENST00000642137 CDNFQ49AH0 187 aa10.23□□□□□ -0.77
LINC00339-213ENST00000642137 PLAC9Q5JTB6 97 aa10.23□□□□□ -0.77
LINC00339-213ENST00000642137 WDR25Q64LD2 544 aaPredicted RBP10.23□□□□□ -0.77
LINC00339-213ENST00000642137 BRICD5Q6PL45 260 aa10.23□□□□□ -0.77
LINC00339-213ENST00000642137 DUX4L9Q6RFH8 374 aaPredicted RBP10.23□□□□□ -0.77
LINC00339-213ENST00000642137 LINC00299Q6ZSB3 139 aa10.23□□□□□ -0.77
LINC00339-213ENST00000642137 C6orf201Q7Z4U5 140 aa10.23□□□□□ -0.77
LINC00339-213ENST00000642137 OR8H2Q8N162 312 aa10.23□□□□□ -0.77
LINC00339-213ENST00000642137 BPIFB2Q8N4F0 458 aa10.23□□□□□ -0.77
LINC00339-213ENST00000642137 WFDC11Q8NEX6 87 aa10.23□□□□□ -0.77
LINC00339-213ENST00000642137 TMEM185AQ8NFB2 350 aa10.23□□□□□ -0.77
LINC00339-213ENST00000642137 OR6Q1Q8NGQ2 317 aa10.23□□□□□ -0.77
LINC00339-213ENST00000642137 ARHGAP5-AS1Q96IT6 56 aa10.23□□□□□ -0.77
LINC00339-213ENST00000642137 WDFY2Q96P53 400 aa10.23□□□□□ -0.77
LINC00339-213ENST00000642137 FAAP24Q9BTP7 215 aa10.23□□□□□ -0.77
LINC00339-213ENST00000642137 NCOR1P1Q9H4R4 102 aa10.23□□□□□ -0.77
LINC00339-213ENST00000642137 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.23□□□□□ -0.77
LINC00339-213ENST00000642137 PTTG2Q9NZH5 202 aa10.23□□□□□ -0.77
LINC00339-213ENST00000642137 RABL2AQ9UBK7 228 aaPredicted RBP10.23□□□□□ -0.77
LINC00339-213ENST00000642137 DUX4Q9UBX2 424 aa10.23□□□□□ -0.77
LINC00339-213ENST00000642137 CLN8Q9UBY8 286 aa10.23□□□□□ -0.77
LINC00339-213ENST00000642137 RABL2BQ9UNT1 228 aa10.23□□□□□ -0.77
LINC00339-213ENST00000642137 CENPEQ02224 2701 aa10.23□□□□□ -0.77
LINC00339-213ENST00000642137 PDZD2O15018 2839 aa10.23□□□□□ -0.77
LINC00339-213ENST00000642137 YLPM1P49750 1951 aaKnown RBP10.23□□□□□ -0.77
LINC00339-213ENST00000642137 TRAV18A0A075B6X5 111 aa10.22□□□□□ -0.77
LINC00339-213ENST00000642137 FCN3O75636 299 aa10.22□□□□□ -0.77
LINC00339-213ENST00000642137 ECDO95905 644 aaPredicted RBP10.22□□□□□ -0.77
LINC00339-213ENST00000642137 MELTFP08582 738 aa10.22□□□□□ -0.77
LINC00339-213ENST00000642137 GSTP1P09211 210 aaKnown RBP10.22□□□□□ -0.77
LINC00339-213ENST00000642137 SELLP14151 372 aa10.22□□□□□ -0.77
LINC00339-213ENST00000642137 HIST1H1DP16402 221 aaKnown RBP10.22□□□□□ -0.77
LINC00339-213ENST00000642137 GNB2P62879 340 aa10.22□□□□□ -0.77
LINC00339-213ENST00000642137 ESCO2Q56NI9 601 aa10.22□□□□□ -0.77
LINC00339-213ENST00000642137 NKAPLQ5M9Q1 402 aa10.22□□□□□ -0.77
LINC00339-213ENST00000642137 CD276Q5ZPR3 534 aa10.22□□□□□ -0.77
LINC00339-213ENST00000642137 SLC35E4Q6ICL7 350 aa10.22□□□□□ -0.77
LINC00339-213ENST00000642137 LAX1Q8IWV1 398 aa10.22□□□□□ -0.77
LINC00339-213ENST00000642137 C1orf159Q96HA4 380 aa10.22□□□□□ -0.77
LINC00339-213ENST00000642137 DIRAS2Q96HU8 199 aa10.22□□□□□ -0.77
LINC00339-213ENST00000642137 SULT4A1Q9BR01 284 aa10.22□□□□□ -0.77
LINC00339-213ENST00000642137 SSBP3Q9BWW4 388 aaPredicted RBP10.22□□□□□ -0.77
LINC00339-213ENST00000642137 CHST6Q9GZX3 395 aa10.22□□□□□ -0.77
LINC00339-213ENST00000642137 PPA2Q9H2U2 334 aa10.22□□□□□ -0.77
LINC00339-213ENST00000642137 RIMS4Q9H426 269 aaPredicted RBP10.22□□□□□ -0.77
LINC00339-213ENST00000642137 EXTL2Q9UBQ6 330 aa10.22□□□□□ -0.77
LINC00339-213ENST00000642137 KCNK7Q9Y2U2 307 aa10.22□□□□□ -0.77
LINC00339-213ENST00000642137 POLR3KQ9Y2Y1 108 aaPredicted RBP10.22□□□□□ -0.77
LINC00339-213ENST00000642137 UBE2QL1A1L167 161 aa10.21□□□□□ -0.77
LINC00339-213ENST00000642137 POM121CA8CG34 1229 aa10.21□□□□□ -0.77
LINC00339-213ENST00000642137 SERPINE3A8MV23 424 aa10.21□□□□□ -0.77
LINC00339-213ENST00000642137 A8MXK9 166 aa10.21□□□□□ -0.77
LINC00339-213ENST00000642137 RNF223E7ERA6 249 aa10.21□□□□□ -0.77
LINC00339-213ENST00000642137 MFNGO00587 321 aa10.21□□□□□ -0.77
LINC00339-213ENST00000642137 FOXH1O75593 365 aa10.21□□□□□ -0.77
LINC00339-213ENST00000642137 GNB3P16520 340 aa10.21□□□□□ -0.77
LINC00339-213ENST00000642137 NDUFB7P17568 137 aa10.21□□□□□ -0.77
LINC00339-213ENST00000642137 TALDO1P37837 337 aa10.21□□□□□ -0.77
LINC00339-213ENST00000642137 MNDAP41218 407 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms