RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 PIGBOS1A0A0B4J2F0 54 aa14.59□□□□□ -0.07
PHGDH-234ENST00000642041 PLSCR5A0PG75 271 aa14.59□□□□□ -0.07
PHGDH-234ENST00000642041 MCRIP1C9JLW8 97 aa14.59□□□□□ -0.07
PHGDH-234ENST00000642041 SSX4O60224 188 aa14.59□□□□□ -0.07
PHGDH-234ENST00000642041 AMY2BP19961 511 aa14.59□□□□□ -0.07
PHGDH-234ENST00000642041 CA6P23280 308 aa14.59□□□□□ -0.07
PHGDH-234ENST00000642041 GABRR1P24046 479 aa14.59□□□□□ -0.07
PHGDH-234ENST00000642041 KCNJ3P48549 501 aa14.59□□□□□ -0.07
PHGDH-234ENST00000642041 TAF9Q16594 264 aa14.59□□□□□ -0.07
PHGDH-234ENST00000642041 CHRFAM7AQ494W8 412 aa14.59□□□□□ -0.07
PHGDH-234ENST00000642041 GLDNQ6ZMI3 551 aaPredicted RBP14.59□□□□□ -0.07
PHGDH-234ENST00000642041 FAM90A1Q86YD7 464 aa14.59□□□□□ -0.07
PHGDH-234ENST00000642041 TCTE3Q8IZS6 198 aa14.59□□□□□ -0.07
PHGDH-234ENST00000642041 BEST4Q8NFU0 473 aa14.59□□□□□ -0.07
PHGDH-234ENST00000642041 OR5AP2Q8NGF4 316 aa14.59□□□□□ -0.07
PHGDH-234ENST00000642041 OR10Z1Q8NGY1 313 aa14.59□□□□□ -0.07
PHGDH-234ENST00000642041 TERB2Q8NHR7 220 aa14.59□□□□□ -0.07
PHGDH-234ENST00000642041 GHITMQ9H3K2 345 aa14.59□□□□□ -0.07
PHGDH-234ENST00000642041 KCNK15Q9H427 330 aa14.59□□□□□ -0.07
PHGDH-234ENST00000642041 NDRG3Q9UGV2 375 aa14.59□□□□□ -0.07
PHGDH-234ENST00000642041 USF3Q68DE3 2245 aa14.58□□□□□ -0.07
PHGDH-234ENST00000642041 TRAV6A0A075B6T7 132 aa14.58□□□□□ -0.08
PHGDH-234ENST00000642041 A0A0A6YYD4 124 aa14.58□□□□□ -0.08
PHGDH-234ENST00000642041 CEACAM18A8MTB9 384 aa14.58□□□□□ -0.08
PHGDH-234ENST00000642041 ANGPTL7O43827 346 aa14.58□□□□□ -0.08
PHGDH-234ENST00000642041 CELA3BP08861 270 aa14.58□□□□□ -0.08
PHGDH-234ENST00000642041 CCR6P51684 374 aa14.58□□□□□ -0.08
PHGDH-234ENST00000642041 KLF3P57682 345 aaPredicted RBP14.58□□□□□ -0.08
PHGDH-234ENST00000642041 TSPAN5P62079 268 aa14.58□□□□□ -0.08
PHGDH-234ENST00000642041 GUCA2AQ02747 115 aa14.58□□□□□ -0.08
PHGDH-234ENST00000642041 TSC22D1Q15714 1073 aa14.58□□□□□ -0.08
PHGDH-234ENST00000642041 FAM209AQ5JX71 171 aa14.58□□□□□ -0.08
PHGDH-234ENST00000642041 HAGHLQ6PII5 290 aaPredicted RBP14.58□□□□□ -0.08
PHGDH-234ENST00000642041 IDO2Q6ZQW0 420 aa14.58□□□□□ -0.08
PHGDH-234ENST00000642041 CALHM1Q8IU99 346 aa14.58□□□□□ -0.08
PHGDH-234ENST00000642041 FAM58AQ8N1B3 248 aa14.58□□□□□ -0.08
PHGDH-234ENST00000642041 OR51S1Q8NGJ8 323 aa14.58□□□□□ -0.08
PHGDH-234ENST00000642041 OR6F1Q8NGZ6 308 aa14.58□□□□□ -0.08
PHGDH-234ENST00000642041 EMG1Q92979 244 aaKnown RBP14.58□□□□□ -0.08
PHGDH-234ENST00000642041 POFUT1Q9H488 388 aa14.58□□□□□ -0.08
PHGDH-234ENST00000642041 ZMAT3Q9HA38 289 aaKnown RBP14.58□□□□□ -0.08
PHGDH-234ENST00000642041 ZNF286AQ9HBT8 521 aa14.58□□□□□ -0.08
PHGDH-234ENST00000642041 C12orf4Q9NQ89 552 aa14.58□□□□□ -0.08
PHGDH-234ENST00000642041 SLC23A1Q9UHI7 598 aa14.58□□□□□ -0.08
PHGDH-234ENST00000642041 KIR2DS1A0A191URI9 304 aa14.57□□□□□ -0.08
PHGDH-234ENST00000642041 A0A1W2PR80 420 aa14.57□□□□□ -0.08
PHGDH-234ENST00000642041 M0R1B8 84 aa14.57□□□□□ -0.08
PHGDH-234ENST00000642041 SH2D1BO14796 132 aa14.57□□□□□ -0.08
PHGDH-234ENST00000642041 OR7C1O76099 320 aaPredicted RBP14.57□□□□□ -0.08
PHGDH-234ENST00000642041 TNFSF4P23510 183 aa14.57□□□□□ -0.08
PHGDH-234ENST00000642041 CFHR2P36980 270 aa14.57□□□□□ -0.08
PHGDH-234ENST00000642041 KIR2DS4P43632 304 aa14.57□□□□□ -0.08
PHGDH-234ENST00000642041 SNU13P55769 128 aaKnown RBP14.57□□□□□ -0.08
PHGDH-234ENST00000642041 KIR2DS1Q14954 304 aa14.57□□□□□ -0.08
PHGDH-234ENST00000642041 SPICQ8N5J4 248 aa14.57□□□□□ -0.08
PHGDH-234ENST00000642041 OR10K1Q8NGX5 313 aa14.57□□□□□ -0.08
PHGDH-234ENST00000642041 NUDCD2Q8WVJ2 157 aa14.57□□□□□ -0.08
PHGDH-234ENST00000642041 GCDHQ92947 438 aaPredicted RBP14.57□□□□□ -0.08
PHGDH-234ENST00000642041 FBXW5Q969U6 566 aa14.57□□□□□ -0.08
PHGDH-234ENST00000642041 DACT3Q96B18 629 aaPredicted RBP14.57□□□□□ -0.08
PHGDH-234ENST00000642041 TLNRD1Q9H1K6 362 aa14.57□□□□□ -0.08
PHGDH-234ENST00000642041 RANBP3Q9H6Z4 567 aaPredicted RBP14.57□□□□□ -0.08
PHGDH-234ENST00000642041 ZNF442Q9H7R0 627 aa14.57□□□□□ -0.08
PHGDH-234ENST00000642041 NECAP2Q9NVZ3 263 aa14.57□□□□□ -0.08
PHGDH-234ENST00000642041 RCC2Q9P258 522 aaKnown RBP14.57□□□□□ -0.08
PHGDH-234ENST00000642041 ZDHHC8Q9ULC8 765 aa14.57□□□□□ -0.08
PHGDH-234ENST00000642041 IGLV3-9A0A075B6K5 115 aa14.56□□□□□ -0.08
PHGDH-234ENST00000642041 TRBV6-6A0A0A6YYG2 114 aa14.56□□□□□ -0.08
PHGDH-234ENST00000642041 A0A0A6YYJ9 748 aa14.56□□□□□ -0.08
PHGDH-234ENST00000642041 IGKV1-12A0A0C4DH73 117 aa14.56□□□□□ -0.08
PHGDH-234ENST00000642041 A0A1W2PP11 408 aa14.56□□□□□ -0.08
PHGDH-234ENST00000642041 TMEM82A0PJX8 343 aa14.56□□□□□ -0.08
PHGDH-234ENST00000642041 ARPC1BO15143 372 aaKnown RBP14.56□□□□□ -0.08
PHGDH-234ENST00000642041 SSNA1O43805 119 aa14.56□□□□□ -0.08
PHGDH-234ENST00000642041 SSX5O60225 188 aa14.56□□□□□ -0.08
PHGDH-234ENST00000642041 DIRAS3O95661 229 aa14.56□□□□□ -0.08
PHGDH-234ENST00000642041 IGKV1D-12P01611 117 aa14.56□□□□□ -0.08
PHGDH-234ENST00000642041 SFTPBP07988 381 aa14.56□□□□□ -0.08
PHGDH-234ENST00000642041 PTHLHP12272 177 aa14.56□□□□□ -0.08
PHGDH-234ENST00000642041 CD40P25942 277 aa14.56□□□□□ -0.08
PHGDH-234ENST00000642041 CCKARP32238 428 aa14.56□□□□□ -0.08
PHGDH-234ENST00000642041 CD200P41217 278 aa14.56□□□□□ -0.08
PHGDH-234ENST00000642041 ARPC4P59998 168 aa14.56□□□□□ -0.08
PHGDH-234ENST00000642041 SEC61A1P61619 476 aaKnown RBP14.56□□□□□ -0.08
PHGDH-234ENST00000642041 FAM27E3Q08E93 113 aa14.56□□□□□ -0.08
PHGDH-234ENST00000642041 KCNJ8Q15842 424 aa14.56□□□□□ -0.08
PHGDH-234ENST00000642041 LPCAT3Q6P1A2 487 aa14.56□□□□□ -0.08
PHGDH-234ENST00000642041 C20orf204Q6ZNR8 217 aa14.56□□□□□ -0.08
PHGDH-234ENST00000642041 MOB1BQ7L9L4 216 aa14.56□□□□□ -0.08
PHGDH-234ENST00000642041 DRAXINQ8NBI3 349 aaPredicted RBP14.56□□□□□ -0.08
PHGDH-234ENST00000642041 OR10AD1Q8NGE0 317 aa14.56□□□□□ -0.08
PHGDH-234ENST00000642041 GIMAP1Q8WWP7 306 aa14.56□□□□□ -0.08
PHGDH-234ENST00000642041 PPA2Q9H2U2 334 aa14.56□□□□□ -0.08
PHGDH-234ENST00000642041 ESRP2Q9H6T0 727 aaKnown RBP14.56□□□□□ -0.08
PHGDH-234ENST00000642041 ROS1P08922 2347 aa14.56□□□□□ -0.08
PHGDH-234ENST00000642041 IFNL4K9M1U5 179 aa14.55□□□□□ -0.08
PHGDH-234ENST00000642041 GEMIN2O14893 280 aaKnown RBP14.55□□□□□ -0.08
PHGDH-234ENST00000642041 PTBP3O95758 552 aaKnown RBP14.55□□□□□ -0.08
PHGDH-234ENST00000642041 RLN1P04808 185 aa14.55□□□□□ -0.08
PHGDH-234ENST00000642041 ZNF735P0CB33 412 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms