RNA–Protein interactions for RNA: ENST00000640931.1

RTTN-223, Transcript of rotatin, human

TSL 5

Gene RTTN, Length 2,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTTN-223	ENST00000640931	SMIM17	P0DL12	118 aa		6.97	□□□□□ -1.29
RTTN-223	ENST00000640931	DPP4	P27487	766 aa		6.97	□□□□□ -1.29
RTTN-223	ENST00000640931	GABRA3	P34903	492 aa		6.97	□□□□□ -1.29
RTTN-223	ENST00000640931	EMD	P50402	254 aa		6.97	□□□□□ -1.29
RTTN-223	ENST00000640931	UBE2N	P61088	152 aa	Known RBP	6.97	□□□□□ -1.29
RTTN-223	ENST00000640931	SRPX	P78539	464 aa		6.97	□□□□□ -1.29
RTTN-223	ENST00000640931	TLE3	Q04726	772 aa		6.97	□□□□□ -1.29
RTTN-223	ENST00000640931	PRTG	Q2VWP7	1150 aa		6.97	□□□□□ -1.29
RTTN-223	ENST00000640931	PGGHG	Q32M88	737 aa		6.97	□□□□□ -1.29
RTTN-223	ENST00000640931	COX19	Q49B96	90 aa		6.97	□□□□□ -1.29
RTTN-223	ENST00000640931	MIDN	Q504T8	468 aa		6.97	□□□□□ -1.29
RTTN-223	ENST00000640931	TMEM177	Q53S58	311 aa		6.97	□□□□□ -1.29
RTTN-223	ENST00000640931	CLEC12A	Q5QGZ9	265 aa		6.97	□□□□□ -1.29
RTTN-223	ENST00000640931	ZNF322	Q6U7Q0	402 aa	Predicted RBP	6.97	□□□□□ -1.29
RTTN-223	ENST00000640931	TMEM182	Q6ZP80	229 aa	Predicted RBP	6.97	□□□□□ -1.29
RTTN-223	ENST00000640931	ESPNL	Q6ZVH7	1005 aa		6.97	□□□□□ -1.29
RTTN-223	ENST00000640931	COX15	Q7KZN9	410 aa		6.97	□□□□□ -1.29
RTTN-223	ENST00000640931	TGIF2LY	Q8IUE0	185 aa		6.97	□□□□□ -1.29
RTTN-223	ENST00000640931	OR2L13	Q8N349	312 aa		6.97	□□□□□ -1.29
RTTN-223	ENST00000640931	PNKD	Q8N490	385 aa		6.97	□□□□□ -1.29
RTTN-223	ENST00000640931	FER1L6-AS1	Q8NA97	138 aa		6.97	□□□□□ -1.29
RTTN-223	ENST00000640931	OR4D9	Q8NGE8	314 aa		6.97	□□□□□ -1.29
RTTN-223	ENST00000640931	ZNF417	Q8TAU3	575 aa		6.97	□□□□□ -1.29
RTTN-223	ENST00000640931	TMEM255B	Q8WV15	326 aa		6.97	□□□□□ -1.29
RTTN-223	ENST00000640931	SDSL	Q96GA7	329 aa		6.97	□□□□□ -1.29
RTTN-223	ENST00000640931	SDF2	Q99470	211 aa		6.97	□□□□□ -1.29
RTTN-223	ENST00000640931	VCX2	Q9H322	139 aa		6.97	□□□□□ -1.29
RTTN-223	ENST00000640931	BCL2L10	Q9HD36	194 aa		6.97	□□□□□ -1.29
RTTN-223	ENST00000640931	MMP25	Q9NPA2	562 aa		6.97	□□□□□ -1.29
RTTN-223	ENST00000640931	TMEM9B	Q9NQ34	198 aa		6.97	□□□□□ -1.29
RTTN-223	ENST00000640931	ZNF586	Q9NXT0	402 aa		6.97	□□□□□ -1.29
RTTN-223	ENST00000640931	FLRT3	Q9NZU0	649 aa		6.97	□□□□□ -1.29
RTTN-223	ENST00000640931	NPIPA1	Q9UND3	350 aa		6.97	□□□□□ -1.29
RTTN-223	ENST00000640931	SIGLEC7	Q9Y286	467 aa		6.97	□□□□□ -1.29
RTTN-223	ENST00000640931	ZNF443	Q9Y2A4	671 aa	Predicted RBP	6.97	□□□□□ -1.29
RTTN-223	ENST00000640931	PPIAL4A	Q9Y536	164 aa		6.97	□□□□□ -1.29
RTTN-223	ENST00000640931	CSAG2	Q9Y5P2	127 aa		6.97	□□□□□ -1.29
RTTN-223	ENST00000640931		J3QR06	171 aa		6.96	□□□□□ -1.29
RTTN-223	ENST00000640931	ZNF217	O75362	1048 aa		6.96	□□□□□ -1.29
RTTN-223	ENST00000640931	GPR75	O95800	540 aa		6.96	□□□□□ -1.29
RTTN-223	ENST00000640931	GAPDH	P04406	335 aa	Known RBP	6.96	□□□□□ -1.29
RTTN-223	ENST00000640931	AKAIN1	P0CW23	69 aa		6.96	□□□□□ -1.29
RTTN-223	ENST00000640931	NID1	P14543	1247 aa		6.96	□□□□□ -1.29
RTTN-223	ENST00000640931	AKR1C4	P17516	323 aa		6.96	□□□□□ -1.29
RTTN-223	ENST00000640931	PPIC	P45877	212 aa		6.96	□□□□□ -1.29
RTTN-223	ENST00000640931	ATP5I	P56385	69 aa	Predicted RBP	6.96	□□□□□ -1.29
RTTN-223	ENST00000640931	NXPH1	P58417	271 aa		6.96	□□□□□ -1.29
RTTN-223	ENST00000640931	FAM3A	P98173	230 aa		6.96	□□□□□ -1.29
RTTN-223	ENST00000640931	AES	Q08117	197 aa		6.96	□□□□□ -1.29
RTTN-223	ENST00000640931	FAM53B	Q14153	422 aa		6.96	□□□□□ -1.29
RTTN-223	ENST00000640931	LRRC10	Q5BKY1	277 aa		6.96	□□□□□ -1.29
RTTN-223	ENST00000640931	ENTPD8	Q5MY95	495 aa		6.96	□□□□□ -1.29
RTTN-223	ENST00000640931	ZNF562	Q6V9R5	426 aa		6.96	□□□□□ -1.29
RTTN-223	ENST00000640931	BOD1L2	Q8IYS8	172 aa		6.96	□□□□□ -1.29
RTTN-223	ENST00000640931	OR10G3	Q8NGC4	313 aa		6.96	□□□□□ -1.29
RTTN-223	ENST00000640931	PFN4	Q8NHR9	129 aa		6.96	□□□□□ -1.29
RTTN-223	ENST00000640931	LGALS14	Q8TCE9	139 aa		6.96	□□□□□ -1.29
RTTN-223	ENST00000640931	MMAB	Q96EY8	250 aa	Predicted RBP	6.96	□□□□□ -1.29
RTTN-223	ENST00000640931	S100A16	Q96FQ6	103 aa	Known RBP	6.96	□□□□□ -1.29
RTTN-223	ENST00000640931	CD180	Q99467	661 aa		6.96	□□□□□ -1.29
RTTN-223	ENST00000640931	ARHGDIG	Q99819	225 aa		6.96	□□□□□ -1.29
RTTN-223	ENST00000640931	NMES1	Q9C002	83 aa		6.96	□□□□□ -1.29
RTTN-223	ENST00000640931	SRA1	Q9HD15	236 aa	Known RBP	6.96	□□□□□ -1.29
RTTN-223	ENST00000640931	FGF21	Q9NSA1	209 aa		6.96	□□□□□ -1.29
RTTN-223	ENST00000640931	LRIT1	Q9P2V4	623 aa		6.96	□□□□□ -1.29
RTTN-223	ENST00000640931	NOP16	Q9Y3C1	178 aa	Known RBP	6.96	□□□□□ -1.29
RTTN-223	ENST00000640931	EML5	Q05BV3	1969 aa		6.96	□□□□□ -1.29
RTTN-223	ENST00000640931	CACNA1I	Q9P0X4	2223 aa		6.96	□□□□□ -1.3
RTTN-223	ENST00000640931	FAM166B	A8MTA8	275 aa		6.96	□□□□□ -1.3
RTTN-223	ENST00000640931		G3V3Y1	287 aa		6.96	□□□□□ -1.3
RTTN-223	ENST00000640931	SAP30	O75446	220 aa		6.96	□□□□□ -1.3
RTTN-223	ENST00000640931	SLC2A10	O95528	541 aa		6.96	□□□□□ -1.3
RTTN-223	ENST00000640931	CSN2	P05814	226 aa		6.96	□□□□□ -1.3
RTTN-223	ENST00000640931	TSFM	P43897	325 aa	Known RBP	6.96	□□□□□ -1.3
RTTN-223	ENST00000640931	GPR6	P46095	362 aa	Predicted RBP	6.96	□□□□□ -1.3
RTTN-223	ENST00000640931	TAS2R41	P59536	307 aa		6.96	□□□□□ -1.3
RTTN-223	ENST00000640931	SSBP1	Q04837	148 aa	Known RBP	6.96	□□□□□ -1.3
RTTN-223	ENST00000640931	ELOC	Q15369	112 aa		6.96	□□□□□ -1.3
RTTN-223	ENST00000640931	TMEM176B	Q3YBM2	270 aa	Predicted RBP	6.96	□□□□□ -1.3
RTTN-223	ENST00000640931	TMEM69	Q5SWH9	247 aa		6.96	□□□□□ -1.3
RTTN-223	ENST00000640931	DCST2	Q5T1A1	773 aa		6.96	□□□□□ -1.3
RTTN-223	ENST00000640931	LEG1	Q6P5S2	330 aa		6.96	□□□□□ -1.3
RTTN-223	ENST00000640931	SHISA6	Q6ZSJ9	500 aa		6.96	□□□□□ -1.3
RTTN-223	ENST00000640931	CEACAM19	Q7Z692	300 aa		6.96	□□□□□ -1.3
RTTN-223	ENST00000640931	ATG4D	Q86TL0	474 aa	Predicted RBP	6.96	□□□□□ -1.3
RTTN-223	ENST00000640931	YRDC	Q86U90	279 aa	Known RBP	6.96	□□□□□ -1.3
RTTN-223	ENST00000640931	CHST4	Q8NCG5	386 aa		6.96	□□□□□ -1.3
RTTN-223	ENST00000640931	OR5B3	Q8NH48	314 aa		6.96	□□□□□ -1.3
RTTN-223	ENST00000640931	DVL3	Q92997	716 aa	Predicted RBP	6.96	□□□□□ -1.3
RTTN-223	ENST00000640931	SEH1L	Q96EE3	360 aa		6.96	□□□□□ -1.3
RTTN-223	ENST00000640931	HARBI1	Q96MB7	349 aa		6.96	□□□□□ -1.3
RTTN-223	ENST00000640931	MCHR1	Q99705	422 aa		6.96	□□□□□ -1.3
RTTN-223	ENST00000640931	NUDT9	Q9BW91	350 aa		6.96	□□□□□ -1.3
RTTN-223	ENST00000640931	POLR2J3	Q9H1A7	115 aa	Known RBP	6.96	□□□□□ -1.3
RTTN-223	ENST00000640931	GEMIN7	Q9H840	131 aa	Known RBP	6.96	□□□□□ -1.3
RTTN-223	ENST00000640931	LYRM4	Q9HD34	91 aa		6.96	□□□□□ -1.3
RTTN-223	ENST00000640931	TMEM106B	Q9NUM4	274 aa		6.96	□□□□□ -1.3
RTTN-223	ENST00000640931	FRRS1L	Q9P0K9	344 aa		6.96	□□□□□ -1.3
RTTN-223	ENST00000640931	MTFP1	Q9UDX5	166 aa		6.96	□□□□□ -1.3
RTTN-223	ENST00000640931	CGGBP1	Q9UFW8	167 aa	Predicted RBP	6.96	□□□□□ -1.3

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