RNA–Protein interactions for RNA: ENST00000640872.1

PAX6-280, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-280ENST00000640872 OR5L2Q8NGL0 311 aa11.84□□□□□ -0.51
PAX6-280ENST00000640872 OR2AE1Q8NHA4 323 aa11.84□□□□□ -0.51
PAX6-280ENST00000640872 CLDND2Q8NHS1 167 aa11.84□□□□□ -0.51
PAX6-280ENST00000640872 SPTSSAQ969W0 71 aa11.84□□□□□ -0.51
PAX6-280ENST00000640872 GPR61Q9BZJ8 451 aa11.84□□□□□ -0.51
PAX6-280ENST00000640872 TMEM222Q9H0R3 208 aa11.84□□□□□ -0.51
PAX6-280ENST00000640872 GFOD1Q9NXC2 390 aa11.84□□□□□ -0.51
PAX6-280ENST00000640872 PLEK2Q9NYT0 353 aa11.84□□□□□ -0.51
PAX6-280ENST00000640872 PPP1R2P9O14990 202 aa11.84□□□□□ -0.51
PAX6-280ENST00000640872 CYB5BO43169 146 aa11.84□□□□□ -0.51
PAX6-280ENST00000640872 HSPA12AO43301 675 aa11.84□□□□□ -0.51
PAX6-280ENST00000640872 OR2J2O76002 312 aa11.84□□□□□ -0.51
PAX6-280ENST00000640872 F10P00742 488 aa11.84□□□□□ -0.51
PAX6-280ENST00000640872 TRGC2P03986 189 aa11.84□□□□□ -0.51
PAX6-280ENST00000640872 EPHA1P21709 976 aa11.84□□□□□ -0.51
PAX6-280ENST00000640872 SSTP61278 116 aa11.84□□□□□ -0.51
PAX6-280ENST00000640872 HERV-K104P61576 105 aa11.84□□□□□ -0.51
PAX6-280ENST00000640872 CNN3Q15417 329 aaKnown RBP11.84□□□□□ -0.51
PAX6-280ENST00000640872 KHDC3LQ587J8 217 aa11.84□□□□□ -0.51
PAX6-280ENST00000640872 RHBDD2Q6NTF9 364 aa11.84□□□□□ -0.51
PAX6-280ENST00000640872 SUMF1Q8NBK3 374 aa11.84□□□□□ -0.51
PAX6-280ENST00000640872 OR5C1Q8NGR4 320 aa11.84□□□□□ -0.51
PAX6-280ENST00000640872 TMEM56Q96MV1 263 aa11.84□□□□□ -0.51
PAX6-280ENST00000640872 ZNF385AQ96PM9 386 aaKnown RBP11.84□□□□□ -0.51
PAX6-280ENST00000640872 NIPSNAP3BQ9BS92 247 aa11.84□□□□□ -0.51
PAX6-280ENST00000640872 SLC25A31Q9H0C2 315 aa11.84□□□□□ -0.51
PAX6-280ENST00000640872 MYOTQ9UBF9 498 aa11.84□□□□□ -0.51
PAX6-280ENST00000640872 FOXD3Q9UJU5 478 aaPredicted RBP11.84□□□□□ -0.51
PAX6-280ENST00000640872 TMEM56-RWDD3S4R434 201 aa11.84□□□□□ -0.51
PAX6-280ENST00000640872 SHANK1Q9Y566 2161 aa11.84□□□□□ -0.51
PAX6-280ENST00000640872 MED12Q93074 2177 aa11.83□□□□□ -0.52
PAX6-280ENST00000640872 DHHO43323 396 aa11.83□□□□□ -0.52
PAX6-280ENST00000640872 PPYP01298 95 aa11.83□□□□□ -0.52
PAX6-280ENST00000640872 CRYGSP22914 178 aa11.83□□□□□ -0.52
PAX6-280ENST00000640872 HNRNPKP61978 463 aaKnown RBP eCLIP11.83□□□□□ -0.52
PAX6-280ENST00000640872 OR8B8Q15620 311 aa11.83□□□□□ -0.52
PAX6-280ENST00000640872 EXT1Q16394 746 aa11.83□□□□□ -0.52
PAX6-280ENST00000640872 ZNF100Q8IYN0 542 aa11.83□□□□□ -0.52
PAX6-280ENST00000640872 TMEM123Q8N131 208 aa11.83□□□□□ -0.52
PAX6-280ENST00000640872 ABHD14BQ96IU4 210 aa11.83□□□□□ -0.52
PAX6-280ENST00000640872 RHOVQ96L33 236 aa11.83□□□□□ -0.52
PAX6-280ENST00000640872 SLC7A11Q9UPY5 501 aa11.83□□□□□ -0.52
PAX6-280ENST00000640872 PTRH2Q9Y3E5 179 aaKnown RBP11.83□□□□□ -0.52
PAX6-280ENST00000640872 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.83□□□□□ -0.52
PAX6-280ENST00000640872 SSSCA1O60232 199 aa11.83□□□□□ -0.52
PAX6-280ENST00000640872 DKK1O94907 266 aa11.83□□□□□ -0.52
PAX6-280ENST00000640872 CEACAM1P13688 526 aa11.83□□□□□ -0.52
PAX6-280ENST00000640872 RBP2P50120 134 aa11.83□□□□□ -0.52
PAX6-280ENST00000640872 DYNLT3P51808 116 aa11.83□□□□□ -0.52
PAX6-280ENST00000640872 NKX6-1P78426 367 aaPredicted RBP11.83□□□□□ -0.52
PAX6-280ENST00000640872 LHFPL2Q6ZUX7 228 aa11.83□□□□□ -0.52
PAX6-280ENST00000640872 KMT5CQ86Y97 462 aa11.83□□□□□ -0.52
PAX6-280ENST00000640872 FAM185AQ8N0U4 392 aa11.83□□□□□ -0.52
PAX6-280ENST00000640872 OSR2Q8N2R0 312 aa11.83□□□□□ -0.52
PAX6-280ENST00000640872 RBMXL1Q96E39 390 aaKnown RBP11.83□□□□□ -0.52
PAX6-280ENST00000640872 GNPNAT1Q96EK6 184 aaPredicted RBP11.83□□□□□ -0.52
PAX6-280ENST00000640872 RBM24Q9BX46 236 aaKnown RBP11.83□□□□□ -0.52
PAX6-280ENST00000640872 TMEM50AO95807 157 aa11.82□□□□□ -0.52
PAX6-280ENST00000640872 FKBP2P26885 142 aaKnown RBP11.82□□□□□ -0.52
PAX6-280ENST00000640872 RUNX1Q01196 453 aa11.82□□□□□ -0.52
PAX6-280ENST00000640872 CXorf66Q5JRM2 361 aaPredicted RBP11.82□□□□□ -0.52
PAX6-280ENST00000640872 SELENOHQ8IZQ5 122 aaKnown RBP11.82□□□□□ -0.52
PAX6-280ENST00000640872 OR10G4Q8NGN3 311 aa11.82□□□□□ -0.52
PAX6-280ENST00000640872 BORCS8Q96FH0 119 aa11.82□□□□□ -0.52
PAX6-280ENST00000640872 SPIN2AQ99865 258 aa11.82□□□□□ -0.52
PAX6-280ENST00000640872 SPIN2BQ9BPZ2 258 aa11.82□□□□□ -0.52
PAX6-280ENST00000640872 MAGT1Q9H0U3 335 aa11.82□□□□□ -0.52
PAX6-280ENST00000640872 IL36GQ9NZH8 169 aa11.82□□□□□ -0.52
PAX6-280ENST00000640872 COLQQ9Y215 455 aaPredicted RBP11.82□□□□□ -0.52
PAX6-280ENST00000640872 ATXN7O15265 892 aaPredicted RBP11.82□□□□□ -0.52
PAX6-280ENST00000640872 PDCD6O75340 191 aa11.82□□□□□ -0.52
PAX6-280ENST00000640872 ZFAND5O76080 213 aa11.82□□□□□ -0.52
PAX6-280ENST00000640872 PTBP3O95758 552 aaKnown RBP11.82□□□□□ -0.52
PAX6-280ENST00000640872 GNRHRP30968 328 aa11.82□□□□□ -0.52
PAX6-280ENST00000640872 PRSS12P56730 875 aa11.82□□□□□ -0.52
PAX6-280ENST00000640872 HLA-DRB3P79483 266 aa11.82□□□□□ -0.52
PAX6-280ENST00000640872 BAXQ07812 192 aa11.82□□□□□ -0.52
PAX6-280ENST00000640872 TMEM42Q69YG0 159 aa11.82□□□□□ -0.52
PAX6-280ENST00000640872 ABHD5Q8WTS1 349 aa11.82□□□□□ -0.52
PAX6-280ENST00000640872 GTF3AQ92664 365 aaKnown RBP11.82□□□□□ -0.52
PAX6-280ENST00000640872 CALHM2Q9HA72 323 aa11.82□□□□□ -0.52
PAX6-280ENST00000640872 PLSCR2Q9NRY7 297 aa11.82□□□□□ -0.52
PAX6-280ENST00000640872 UFSP2Q9NUQ7 469 aa11.82□□□□□ -0.52
PAX6-280ENST00000640872 ST3GAL6Q9Y274 331 aa11.82□□□□□ -0.52
PAX6-280ENST00000640872 LOC102723971A0A1B0GUV8 181 aa11.81□□□□□ -0.52
PAX6-280ENST00000640872 CLEC18AA5D8T8 446 aa11.81□□□□□ -0.52
PAX6-280ENST00000640872 OR5H1A6NKK0 313 aa11.81□□□□□ -0.52
PAX6-280ENST00000640872 B4DEV8 164 aa11.81□□□□□ -0.52
PAX6-280ENST00000640872 CST7O76096 145 aa11.81□□□□□ -0.52
PAX6-280ENST00000640872 TRGC1P0CF51 173 aa11.81□□□□□ -0.52
PAX6-280ENST00000640872 CD81P60033 236 aa11.81□□□□□ -0.52
PAX6-280ENST00000640872 VAMP2P63027 116 aa11.81□□□□□ -0.52
PAX6-280ENST00000640872 GAMTQ14353 236 aa11.81□□□□□ -0.52
PAX6-280ENST00000640872 DAZAP2Q15038 168 aaPredicted RBP11.81□□□□□ -0.52
PAX6-280ENST00000640872 NKAIN1Q4KMZ8 207 aa11.81□□□□□ -0.52
PAX6-280ENST00000640872 PDZD11Q5EBL8 140 aa11.81□□□□□ -0.52
PAX6-280ENST00000640872 AKR1C8PQ5T2L2 129 aa11.81□□□□□ -0.52
PAX6-280ENST00000640872 TMEM211Q6ICI0 200 aa11.81□□□□□ -0.52
PAX6-280ENST00000640872 OR2T2Q6IF00 324 aa11.81□□□□□ -0.52
PAX6-280ENST00000640872 DPPA3Q6W0C5 159 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms