RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 Q6ZT83 130 aa12.92□□□□□ -0.34
TRIM3-215ENST00000639856 RPRMLQ8N4K4 120 aa12.92□□□□□ -0.34
TRIM3-215ENST00000639856 BHLHE23Q8NDY6 225 aa12.92□□□□□ -0.34
TRIM3-215ENST00000639856 OR5A2Q8NGI9 324 aa12.92□□□□□ -0.34
TRIM3-215ENST00000639856 STOML3Q8TAV4 291 aa12.92□□□□□ -0.34
TRIM3-215ENST00000639856 SLAMF9Q96A28 289 aa12.92□□□□□ -0.34
TRIM3-215ENST00000639856 MEMO1Q9Y316 297 aa12.92□□□□□ -0.34
TRIM3-215ENST00000639856 CD300LBA8K4G0 201 aa12.91□□□□□ -0.34
TRIM3-215ENST00000639856 ZNF732B4DXR9 585 aa12.91□□□□□ -0.34
TRIM3-215ENST00000639856 PRSS44E7EML9 344 aa12.91□□□□□ -0.34
TRIM3-215ENST00000639856 K7ENP7 123 aa12.91□□□□□ -0.34
TRIM3-215ENST00000639856 FCGR2CP31995 323 aa12.91□□□□□ -0.34
TRIM3-215ENST00000639856 TBR1Q16650 682 aa12.91□□□□□ -0.34
TRIM3-215ENST00000639856 INO80CQ6PI98 192 aaPredicted RBP12.91□□□□□ -0.34
TRIM3-215ENST00000639856 BVESQ8NE79 360 aa12.91□□□□□ -0.34
TRIM3-215ENST00000639856 NANOS1Q8WY41 292 aaKnown RBP12.91□□□□□ -0.34
TRIM3-215ENST00000639856 CCDC120Q96HB5 630 aa12.91□□□□□ -0.34
TRIM3-215ENST00000639856 LINC00052Q96N35 136 aa12.91□□□□□ -0.34
TRIM3-215ENST00000639856 AQP10Q96PS8 301 aa12.91□□□□□ -0.34
TRIM3-215ENST00000639856 ZNF71Q9NQZ8 489 aaPredicted RBP12.91□□□□□ -0.34
TRIM3-215ENST00000639856 GSKIPQ9P0R6 139 aa12.91□□□□□ -0.34
TRIM3-215ENST00000639856 KCNIP3Q9Y2W7 256 aa12.91□□□□□ -0.34
TRIM3-215ENST00000639856 TLN1Q9Y490 2541 aaKnown RBP12.91□□□□□ -0.34
TRIM3-215ENST00000639856 MSGN1A6NI15 193 aa12.91□□□□□ -0.34
TRIM3-215ENST00000639856 KRBOX1C9JBD0 128 aa12.91□□□□□ -0.34
TRIM3-215ENST00000639856 TEX46H3BTG2 121 aa12.91□□□□□ -0.34
TRIM3-215ENST00000639856 TNFSF13O75888 250 aa12.91□□□□□ -0.34
TRIM3-215ENST00000639856 ZNF205O95201 554 aa12.91□□□□□ -0.34
TRIM3-215ENST00000639856 NUP62P37198 522 aaPredicted RBP12.91□□□□□ -0.34
TRIM3-215ENST00000639856 FXYD4P59646 89 aa12.91□□□□□ -0.34
TRIM3-215ENST00000639856 NAAAQ02083 359 aa12.91□□□□□ -0.34
TRIM3-215ENST00000639856 MKXQ8IYA7 352 aa12.91□□□□□ -0.34
TRIM3-215ENST00000639856 GALNT14Q96FL9 552 aa12.91□□□□□ -0.34
TRIM3-215ENST00000639856 DNTTIP1Q9H147 329 aa12.91□□□□□ -0.34
TRIM3-215ENST00000639856 FAM215AQ9Y5M1 114 aa12.91□□□□□ -0.34
TRIM3-215ENST00000639856 SCO1O75880 301 aa12.9□□□□□ -0.34
TRIM3-215ENST00000639856 CRYABP02511 175 aaKnown RBP12.9□□□□□ -0.34
TRIM3-215ENST00000639856 TPT1P13693 172 aaKnown RBP12.9□□□□□ -0.34
TRIM3-215ENST00000639856 M6PRP20645 277 aa12.9□□□□□ -0.34
TRIM3-215ENST00000639856 UCP3P55916 312 aa12.9□□□□□ -0.34
TRIM3-215ENST00000639856 TGFBR3Q03167 851 aa12.9□□□□□ -0.34
TRIM3-215ENST00000639856 IAH1Q2TAA2 248 aaPredicted RBP12.9□□□□□ -0.34
TRIM3-215ENST00000639856 ABCA11PQ4W5N1 156 aa12.9□□□□□ -0.34
TRIM3-215ENST00000639856 OR2A2Q6IF42 318 aa12.9□□□□□ -0.34
TRIM3-215ENST00000639856 SLC30A7Q8NEW0 376 aa12.9□□□□□ -0.34
TRIM3-215ENST00000639856 SUN5Q8TC36 379 aa12.9□□□□□ -0.34
TRIM3-215ENST00000639856 MOB3AQ96BX8 217 aa12.9□□□□□ -0.34
TRIM3-215ENST00000639856 HIST1H2AAQ96QV6 131 aa12.9□□□□□ -0.34
TRIM3-215ENST00000639856 SHARPINQ9H0F6 387 aa12.9□□□□□ -0.34
TRIM3-215ENST00000639856 NAA60Q9H7X0 242 aa12.9□□□□□ -0.34
TRIM3-215ENST00000639856 BARX1Q9HBU1 254 aaPredicted RBP12.9□□□□□ -0.34
TRIM3-215ENST00000639856 MTCH1Q9NZJ7 389 aa12.9□□□□□ -0.34
TRIM3-215ENST00000639856 DNAJB11Q9UBS4 358 aa12.9□□□□□ -0.34
TRIM3-215ENST00000639856 SHANK1Q9Y566 2161 aa12.9□□□□□ -0.34
TRIM3-215ENST00000639856 ZSCAN5BA6NJL1 495 aa12.89□□□□□ -0.35
TRIM3-215ENST00000639856 IFNA21P01568 189 aa12.89□□□□□ -0.35
TRIM3-215ENST00000639856 GLP1RP43220 463 aa12.89□□□□□ -0.35
TRIM3-215ENST00000639856 GABRA6Q16445 453 aa12.89□□□□□ -0.35
TRIM3-215ENST00000639856 MPV17LQ2QL34 196 aa12.89□□□□□ -0.35
TRIM3-215ENST00000639856 RTN4IP1Q8WWV3 396 aaPredicted RBP12.89□□□□□ -0.35
TRIM3-215ENST00000639856 OPN3Q9H1Y3 402 aaPredicted RBP12.89□□□□□ -0.35
TRIM3-215ENST00000639856 CYTL1Q9NRR1 136 aa12.89□□□□□ -0.35
TRIM3-215ENST00000639856 MPC1Q9Y5U8 109 aa12.89□□□□□ -0.35
TRIM3-215ENST00000639856 MBD3L4A6NDZ8 208 aaPredicted RBP12.89□□□□□ -0.35
TRIM3-215ENST00000639856 MBD3L3A6NE82 208 aaPredicted RBP12.89□□□□□ -0.35
TRIM3-215ENST00000639856 MBD3L5A6NJ08 208 aaPredicted RBP12.89□□□□□ -0.35
TRIM3-215ENST00000639856 ANKRD30BLA7E2S9 258 aa12.89□□□□□ -0.35
TRIM3-215ENST00000639856 TRAPPC2LH3BP13 241 aa12.89□□□□□ -0.35
TRIM3-215ENST00000639856 ZNF14P17017 642 aaPredicted RBP12.89□□□□□ -0.35
TRIM3-215ENST00000639856 IDH3GP51553 393 aaPredicted RBP12.89□□□□□ -0.35
TRIM3-215ENST00000639856 S100A10P60903 97 aa12.89□□□□□ -0.35
TRIM3-215ENST00000639856 UBE2NP61088 152 aaKnown RBP12.89□□□□□ -0.35
TRIM3-215ENST00000639856 SRSF7Q16629 238 aaKnown RBP eCLIP12.89□□□□□ -0.35
TRIM3-215ENST00000639856 TUSC1Q2TAM9 212 aa12.89□□□□□ -0.35
TRIM3-215ENST00000639856 Q6ZS49 121 aa12.89□□□□□ -0.35
TRIM3-215ENST00000639856 OR5L1Q8NGL2 311 aa12.89□□□□□ -0.35
TRIM3-215ENST00000639856 MBD3L2Q8NHZ7 208 aaPredicted RBP12.89□□□□□ -0.35
TRIM3-215ENST00000639856 OR5P3Q8WZ94 311 aa12.89□□□□□ -0.35
TRIM3-215ENST00000639856 STARD4Q96DR4 205 aa12.89□□□□□ -0.35
TRIM3-215ENST00000639856 HS3ST6Q96QI5 342 aa12.89□□□□□ -0.35
TRIM3-215ENST00000639856 SLC2A9Q9NRM0 540 aa12.89□□□□□ -0.35
TRIM3-215ENST00000639856 RCC2Q9P258 522 aaKnown RBP12.89□□□□□ -0.35
TRIM3-215ENST00000639856 TUBD1Q9UJT1 453 aa12.89□□□□□ -0.35
TRIM3-215ENST00000639856 LGALS8O00214 317 aa12.88□□□□□ -0.35
TRIM3-215ENST00000639856 OR5AC1P0C628 307 aa12.88□□□□□ -0.35
TRIM3-215ENST00000639856 COX5AP20674 150 aa12.88□□□□□ -0.35
TRIM3-215ENST00000639856 TMEM187Q14656 261 aa12.88□□□□□ -0.35
TRIM3-215ENST00000639856 GGNBP1Q5YKI7 109 aa12.88□□□□□ -0.35
TRIM3-215ENST00000639856 FAM180AQ6UWF9 173 aa12.88□□□□□ -0.35
TRIM3-215ENST00000639856 FAM219AQ8IW50 185 aa12.88□□□□□ -0.35
TRIM3-215ENST00000639856 BAP18Q8IXM2 172 aa12.88□□□□□ -0.35
TRIM3-215ENST00000639856 SLC38A6Q8IZM9 456 aa12.88□□□□□ -0.35
TRIM3-215ENST00000639856 ZNF610Q8N9Z0 462 aa12.88□□□□□ -0.35
TRIM3-215ENST00000639856 Q8NA96 180 aa12.88□□□□□ -0.35
TRIM3-215ENST00000639856 MRPL24Q96A35 216 aaKnown RBP12.88□□□□□ -0.35
TRIM3-215ENST00000639856 CNTNAP3BQ96NU0 1288 aa12.88□□□□□ -0.35
TRIM3-215ENST00000639856 SYT3Q9BQG1 590 aa12.88□□□□□ -0.35
TRIM3-215ENST00000639856 SUCNR1Q9BXA5 334 aa12.88□□□□□ -0.35
TRIM3-215ENST00000639856 CNTNAP3Q9BZ76 1288 aa12.88□□□□□ -0.35
TRIM3-215ENST00000639856 PLSCR4Q9NRQ2 329 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms