RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 CHST4Q8NCG5 386 aa14.75□□□□□ -0.05
CLN6-220ENST00000637450 OR5D18Q8NGL1 313 aa14.75□□□□□ -0.05
CLN6-220ENST00000637450 OR13C3Q8NGS6 347 aa14.75□□□□□ -0.05
CLN6-220ENST00000637450 ZCCHC4Q9H5U6 513 aa14.75□□□□□ -0.05
CLN6-220ENST00000637450 ZNF286AQ9HBT8 521 aa14.75□□□□□ -0.05
CLN6-220ENST00000637450 AURKAIP1Q9NWT8 199 aaPredicted RBP14.75□□□□□ -0.05
CLN6-220ENST00000637450 EXOGQ9Y2C4 368 aaKnown RBP14.75□□□□□ -0.05
CLN6-220ENST00000637450 A0A1W2PRX2 142 aa14.74□□□□□ -0.05
CLN6-220ENST00000637450 FAM172BPA6NC97 362 aa14.74□□□□□ -0.05
CLN6-220ENST00000637450 BUB1B-PAK6H3BSN5 160 aa14.74□□□□□ -0.05
CLN6-220ENST00000637450 OR2F2O95006 317 aa14.74□□□□□ -0.05
CLN6-220ENST00000637450 ZNF44P15621 663 aa14.74□□□□□ -0.05
CLN6-220ENST00000637450 ARHGDIBP52566 201 aa14.74□□□□□ -0.05
CLN6-220ENST00000637450 ALKBH1Q13686 389 aaKnown RBP14.74□□□□□ -0.05
CLN6-220ENST00000637450 HLA-DRB5Q30154 266 aa14.74□□□□□ -0.05
CLN6-220ENST00000637450 FOXB2Q5VYV0 432 aa14.74□□□□□ -0.05
CLN6-220ENST00000637450 CAPSLQ8WWF8 208 aa14.74□□□□□ -0.05
CLN6-220ENST00000637450 CREB3L1Q96BA8 519 aa14.74□□□□□ -0.05
CLN6-220ENST00000637450 COQ2Q96H96 371 aa14.74□□□□□ -0.05
CLN6-220ENST00000637450 C4orf36Q96KX1 117 aa14.74□□□□□ -0.05
CLN6-220ENST00000637450 RBM14Q96PK6 669 aaKnown RBP14.74□□□□□ -0.05
CLN6-220ENST00000637450 SLC25A33Q9BSK2 321 aa14.74□□□□□ -0.05
CLN6-220ENST00000637450 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.74□□□□□ -0.05
CLN6-220ENST00000637450 MYRFQ9Y2G1 1151 aa14.74□□□□□ -0.05
CLN6-220ENST00000637450 A0A087X0M5 115 aa14.73□□□□□ -0.05
CLN6-220ENST00000637450 A0A1B0GX30 115 aa14.73□□□□□ -0.05
CLN6-220ENST00000637450 LY6LH3BQJ8 138 aa14.73□□□□□ -0.05
CLN6-220ENST00000637450 SLC33A1O00400 549 aaPredicted RBP14.73□□□□□ -0.05
CLN6-220ENST00000637450 TOR1AO14656 332 aa14.73□□□□□ -0.05
CLN6-220ENST00000637450 DEGS1O15121 323 aa14.73□□□□□ -0.05
CLN6-220ENST00000637450 CIB2O75838 187 aa14.73□□□□□ -0.05
CLN6-220ENST00000637450 ALX3O95076 343 aa14.73□□□□□ -0.05
CLN6-220ENST00000637450 LPLP06858 475 aa14.73□□□□□ -0.05
CLN6-220ENST00000637450 CD33P20138 364 aa14.73□□□□□ -0.05
CLN6-220ENST00000637450 PTGFRP43088 359 aa14.73□□□□□ -0.05
CLN6-220ENST00000637450 PRRX1P54821 245 aa14.73□□□□□ -0.05
CLN6-220ENST00000637450 CDK5R1Q15078 307 aa14.73□□□□□ -0.05
CLN6-220ENST00000637450 C17orf58Q2M2W7 97 aa14.73□□□□□ -0.05
CLN6-220ENST00000637450 ABCA11PQ4W5N1 156 aa14.73□□□□□ -0.05
CLN6-220ENST00000637450 KRBOX4Q5JUW0 171 aa14.73□□□□□ -0.05
CLN6-220ENST00000637450 TPTE2P1Q5T6R2 138 aa14.73□□□□□ -0.05
CLN6-220ENST00000637450 OR4D6Q8NGJ1 314 aa14.73□□□□□ -0.05
CLN6-220ENST00000637450 PYDC1Q8WXC3 89 aa14.73□□□□□ -0.05
CLN6-220ENST00000637450 LGALS12Q96DT0 336 aa14.73□□□□□ -0.05
CLN6-220ENST00000637450 NEK6Q9HC98 313 aa14.73□□□□□ -0.05
CLN6-220ENST00000637450 ZNF281Q9Y2X9 895 aa14.73□□□□□ -0.05
CLN6-220ENST00000637450 ORC6Q9Y5N6 252 aa14.73□□□□□ -0.05
CLN6-220ENST00000637450 TSSC4Q9Y5U2 329 aaPredicted RBP14.73□□□□□ -0.05
CLN6-220ENST00000637450 TCRBV4S1A1TA0A5B7 111 aa14.72□□□□□ -0.05
CLN6-220ENST00000637450 SNTNA6NMZ2 147 aa14.72□□□□□ -0.05
CLN6-220ENST00000637450 ZNF729A6NN14 1252 aaPredicted RBP14.72□□□□□ -0.05
CLN6-220ENST00000637450 AMY1AP04745 511 aa14.72□□□□□ -0.05
CLN6-220ENST00000637450 AMY2AP04746 511 aa14.72□□□□□ -0.05
CLN6-220ENST00000637450 CGB3P0DN86 165 aa14.72□□□□□ -0.05
CLN6-220ENST00000637450 CGB7P0DN87 165 aa14.72□□□□□ -0.05
CLN6-220ENST00000637450 IGLL1P15814 213 aa14.72□□□□□ -0.05
CLN6-220ENST00000637450 CEACAM3P40198 252 aa14.72□□□□□ -0.05
CLN6-220ENST00000637450 ZP1P60852 638 aa14.72□□□□□ -0.05
CLN6-220ENST00000637450 GALEQ14376 348 aa14.72□□□□□ -0.05
CLN6-220ENST00000637450 ZIK1Q3SY52 487 aaPredicted RBP14.72□□□□□ -0.05
CLN6-220ENST00000637450 UTF1Q5T230 341 aa14.72□□□□□ -0.05
CLN6-220ENST00000637450 OR5D14Q8NGL3 314 aa14.72□□□□□ -0.05
CLN6-220ENST00000637450 ING3Q9NXR8 418 aa14.72□□□□□ -0.05
CLN6-220ENST00000637450 KIAA2026Q5HYC2 2103 aa14.72□□□□□ -0.05
CLN6-220ENST00000637450 OOSP1A8MZH6 123 aa14.71□□□□□ -0.05
CLN6-220ENST00000637450 EI24O14681 340 aa14.71□□□□□ -0.05
CLN6-220ENST00000637450 TMEM225BP0DP42 221 aa14.71□□□□□ -0.05
CLN6-220ENST00000637450 PF4V1P10720 104 aa14.71□□□□□ -0.05
CLN6-220ENST00000637450 DBTP11182 482 aaKnown RBP14.71□□□□□ -0.05
CLN6-220ENST00000637450 ALDH3A2P51648 485 aa14.71□□□□□ -0.05
CLN6-220ENST00000637450 ATXN7L3Q14CW9 347 aaPredicted RBP14.71□□□□□ -0.05
CLN6-220ENST00000637450 KISS1Q15726 138 aa14.71□□□□□ -0.05
CLN6-220ENST00000637450 CCDC121Q6ZUS5 278 aa14.71□□□□□ -0.05
CLN6-220ENST00000637450 LHFPL3Q86UP9 236 aa14.71□□□□□ -0.05
CLN6-220ENST00000637450 SERPINA12Q8IW75 414 aa14.71□□□□□ -0.05
CLN6-220ENST00000637450 SYS1Q8N2H4 156 aa14.71□□□□□ -0.05
CLN6-220ENST00000637450 PARP16Q8N5Y8 322 aa14.71□□□□□ -0.05
CLN6-220ENST00000637450 MYDGFQ969H8 173 aa14.71□□□□□ -0.05
CLN6-220ENST00000637450 MRPL48Q96GC5 212 aaKnown RBP14.71□□□□□ -0.05
CLN6-220ENST00000637450 MYCBPQ99417 103 aaPredicted RBP14.71□□□□□ -0.05
CLN6-220ENST00000637450 ALG8Q9BVK2 526 aa14.71□□□□□ -0.05
CLN6-220ENST00000637450 ISG20L2Q9H9L3 353 aaKnown RBP14.71□□□□□ -0.05
CLN6-220ENST00000637450 OR6C3Q9NZP0 311 aa14.71□□□□□ -0.05
CLN6-220ENST00000637450 AASSQ9UDR5 926 aa14.71□□□□□ -0.05
CLN6-220ENST00000637450 KBTBD11-OT1A0A1B0GTJ5 212 aa14.7□□□□□ -0.06
CLN6-220ENST00000637450 SH2D7A6NKC9 451 aaPredicted RBP14.7□□□□□ -0.06
CLN6-220ENST00000637450 SULT1B1O43704 296 aa14.7□□□□□ -0.06
CLN6-220ENST00000637450 HCKP08631 526 aa14.7□□□□□ -0.06
CLN6-220ENST00000637450 RPSAP08865 295 aaKnown RBP14.7□□□□□ -0.06
CLN6-220ENST00000637450 GABRB1P18505 474 aa14.7□□□□□ -0.06
CLN6-220ENST00000637450 OR3A4PP47883 348 aa14.7□□□□□ -0.06
CLN6-220ENST00000637450 ELP2Q6IA86 826 aa14.7□□□□□ -0.06
CLN6-220ENST00000637450 CCDC144NLQ6NUI1 221 aa14.7□□□□□ -0.06
CLN6-220ENST00000637450 C10orf99Q6UWK7 81 aa14.7□□□□□ -0.06
CLN6-220ENST00000637450 OR51T1Q8NGJ9 327 aa14.7□□□□□ -0.06
CLN6-220ENST00000637450 ZNF649Q9BS31 505 aa14.7□□□□□ -0.06
CLN6-220ENST00000637450 PPIL3Q9H2H8 161 aaKnown RBP14.7□□□□□ -0.06
CLN6-220ENST00000637450 NCOR1P1Q9H4R4 102 aa14.7□□□□□ -0.06
CLN6-220ENST00000637450 FAM90A18PA6NE21 464 aa14.69□□□□□ -0.06
CLN6-220ENST00000637450 FAM90A16PA6NEW6 464 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms