RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 SIGIRRQ6IA17 410 aa12.17□□□□□ -0.46
LINC00339-208ENST00000634934 WDR82Q6UXN9 313 aa12.17□□□□□ -0.46
LINC00339-208ENST00000634934 IDO2Q6ZQW0 420 aa12.17□□□□□ -0.46
LINC00339-208ENST00000634934 LYPD6Q86Y78 171 aa12.17□□□□□ -0.46
LINC00339-208ENST00000634934 MKXQ8IYA7 352 aa12.17□□□□□ -0.46
LINC00339-208ENST00000634934 BATF2Q8N1L9 274 aa12.17□□□□□ -0.46
LINC00339-208ENST00000634934 BOLLQ8N9W6 283 aaKnown RBP12.17□□□□□ -0.46
LINC00339-208ENST00000634934 OR4D6Q8NGJ1 314 aa12.17□□□□□ -0.46
LINC00339-208ENST00000634934 OR2T35Q8NGX2 323 aa12.17□□□□□ -0.46
LINC00339-208ENST00000634934 OR51F2Q8NH61 342 aa12.17□□□□□ -0.46
LINC00339-208ENST00000634934 RDH5Q92781 318 aa12.17□□□□□ -0.46
LINC00339-208ENST00000634934 SLAMF9Q96A28 289 aa12.17□□□□□ -0.46
LINC00339-208ENST00000634934 PERPQ96FX8 193 aa12.17□□□□□ -0.46
LINC00339-208ENST00000634934 S100A13Q99584 98 aa12.17□□□□□ -0.46
LINC00339-208ENST00000634934 GSX2Q9BZM3 304 aa12.17□□□□□ -0.46
LINC00339-208ENST00000634934 PKIBQ9C010 78 aa12.17□□□□□ -0.46
LINC00339-208ENST00000634934 PIPOXQ9P0Z9 390 aa12.17□□□□□ -0.46
LINC00339-208ENST00000634934 MRPS28Q9Y2Q9 187 aaKnown RBP12.17□□□□□ -0.46
LINC00339-208ENST00000634934 POLDIP2Q9Y2S7 368 aa12.17□□□□□ -0.46
LINC00339-208ENST00000634934 CCDC168Q8NDH2 2452 aa12.17□□□□□ -0.46
LINC00339-208ENST00000634934 LRRC30A6NM36 301 aa12.16□□□□□ -0.46
LINC00339-208ENST00000634934 RBBP9O75884 186 aa12.16□□□□□ -0.46
LINC00339-208ENST00000634934 CYB5R3P00387 301 aaPredicted RBP12.16□□□□□ -0.46
LINC00339-208ENST00000634934 IGHV4-39P01824 125 aa12.16□□□□□ -0.46
LINC00339-208ENST00000634934 RRASP10301 218 aa12.16□□□□□ -0.46
LINC00339-208ENST00000634934 COL8A2P25067 703 aa12.16□□□□□ -0.46
LINC00339-208ENST00000634934 MPZP25189 248 aa12.16□□□□□ -0.46
LINC00339-208ENST00000634934 HTR2CP28335 458 aa12.16□□□□□ -0.46
LINC00339-208ENST00000634934 IL24Q13007 206 aa12.16□□□□□ -0.46
LINC00339-208ENST00000634934 HFEQ30201 348 aa12.16□□□□□ -0.46
LINC00339-208ENST00000634934 C1orf100Q5SVJ3 147 aa12.16□□□□□ -0.46
LINC00339-208ENST00000634934 AWAT2Q6E213 333 aa12.16□□□□□ -0.46
LINC00339-208ENST00000634934 GLIPR1L1Q6UWM5 242 aa12.16□□□□□ -0.46
LINC00339-208ENST00000634934 C1QL2Q7Z5L3 287 aa12.16□□□□□ -0.46
LINC00339-208ENST00000634934 OR6M1Q8NGM8 313 aa12.16□□□□□ -0.46
LINC00339-208ENST00000634934 Q8TCH9 128 aa12.16□□□□□ -0.46
LINC00339-208ENST00000634934 LRRC29Q8WV35 223 aa12.16□□□□□ -0.46
LINC00339-208ENST00000634934 ZNF488Q96MN9 340 aa12.16□□□□□ -0.46
LINC00339-208ENST00000634934 ZNF701Q9NV72 531 aaPredicted RBP12.16□□□□□ -0.46
LINC00339-208ENST00000634934 DCAF16Q9NXF7 216 aa12.16□□□□□ -0.46
LINC00339-208ENST00000634934 RNF7Q9UBF6 113 aa12.16□□□□□ -0.46
LINC00339-208ENST00000634934 MGAT4CQ9UBM8 478 aa12.16□□□□□ -0.46
LINC00339-208ENST00000634934 MAP1AP78559 2803 aaPredicted RBP12.16□□□□□ -0.46
LINC00339-208ENST00000634934 TRAPPC2LH3BP13 241 aa12.16□□□□□ -0.46
LINC00339-208ENST00000634934 VEGFCP49767 419 aa12.16□□□□□ -0.46
LINC00339-208ENST00000634934 CLDN12P56749 244 aa12.16□□□□□ -0.46
LINC00339-208ENST00000634934 ACTBP60709 375 aa12.16□□□□□ -0.46
LINC00339-208ENST00000634934 ACTG1P63261 375 aa12.16□□□□□ -0.46
LINC00339-208ENST00000634934 HOXA4Q00056 320 aaPredicted RBP12.16□□□□□ -0.46
LINC00339-208ENST00000634934 RSU1Q15404 277 aa12.16□□□□□ -0.46
LINC00339-208ENST00000634934 SLC36A1Q7Z2H8 476 aa12.16□□□□□ -0.46
LINC00339-208ENST00000634934 ZSCAN4Q8NAM6 433 aaPredicted RBP12.16□□□□□ -0.46
LINC00339-208ENST00000634934 TMEM106BQ9NUM4 274 aa12.16□□□□□ -0.46
LINC00339-208ENST00000634934 MTCH1Q9NZJ7 389 aa12.16□□□□□ -0.46
LINC00339-208ENST00000634934 MYO9AB2RTY4 2548 aa12.15□□□□□ -0.46
LINC00339-208ENST00000634934 IGKV1-12A0A0C4DH73 117 aa12.15□□□□□ -0.46
LINC00339-208ENST00000634934 C3orf80F5H4A9 247 aa12.15□□□□□ -0.46
LINC00339-208ENST00000634934 MPC2O95563 127 aa12.15□□□□□ -0.46
LINC00339-208ENST00000634934 IGKV1D-12P01611 117 aa12.15□□□□□ -0.46
LINC00339-208ENST00000634934 BCL3P20749 454 aa12.15□□□□□ -0.46
LINC00339-208ENST00000634934 RAB14P61106 215 aa12.15□□□□□ -0.46
LINC00339-208ENST00000634934 MRPS11P82912 194 aaKnown RBP12.15□□□□□ -0.46
LINC00339-208ENST00000634934 EXOSC2Q13868 293 aaKnown RBP12.15□□□□□ -0.46
LINC00339-208ENST00000634934 SAXO1Q8IYX7 474 aa12.15□□□□□ -0.46
LINC00339-208ENST00000634934 DTX3Q8N9I9 347 aa12.15□□□□□ -0.46
LINC00339-208ENST00000634934 OR10K1Q8NGX5 313 aa12.15□□□□□ -0.46
LINC00339-208ENST00000634934 NUDT16L1Q9BRJ7 211 aaKnown RBP12.15□□□□□ -0.46
LINC00339-208ENST00000634934 METTL9Q9H1A3 318 aa12.15□□□□□ -0.46
LINC00339-208ENST00000634934 BARX1Q9HBU1 254 aaPredicted RBP12.15□□□□□ -0.46
LINC00339-208ENST00000634934 BEX4Q9NWD9 120 aaPredicted RBP12.15□□□□□ -0.46
LINC00339-208ENST00000634934 KLK11Q9UBX7 282 aa12.15□□□□□ -0.46
LINC00339-208ENST00000634934 UBE2QL1A1L167 161 aa12.14□□□□□ -0.47
LINC00339-208ENST00000634934 IFNL4K9M1U5 179 aa12.14□□□□□ -0.47
LINC00339-208ENST00000634934 WNT9BO14905 357 aa12.14□□□□□ -0.47
LINC00339-208ENST00000634934 ARPC1BO15143 372 aaKnown RBP12.14□□□□□ -0.47
LINC00339-208ENST00000634934 B3GALNT1O75752 331 aa12.14□□□□□ -0.47
LINC00339-208ENST00000634934 ZNF205O95201 554 aa12.14□□□□□ -0.47
LINC00339-208ENST00000634934 AKAIN1P0CW23 69 aa12.14□□□□□ -0.47
LINC00339-208ENST00000634934 PGA5P0DJD9 388 aa12.14□□□□□ -0.47
LINC00339-208ENST00000634934 NPBWR2P48146 333 aa12.14□□□□□ -0.47
LINC00339-208ENST00000634934 SRSF4Q08170 494 aaKnown RBP12.14□□□□□ -0.47
LINC00339-208ENST00000634934 ZMYND11Q15326 602 aa12.14□□□□□ -0.47
LINC00339-208ENST00000634934 DEFB113Q30KQ7 82 aa12.14□□□□□ -0.47
LINC00339-208ENST00000634934 SLC22A6Q4U2R8 563 aa12.14□□□□□ -0.47
LINC00339-208ENST00000634934 NHLRC3Q5JS37 347 aa12.14□□□□□ -0.47
LINC00339-208ENST00000634934 FAM201AQ5SY85 155 aa12.14□□□□□ -0.47
LINC00339-208ENST00000634934 Q6ZTK2 550 aa12.14□□□□□ -0.47
LINC00339-208ENST00000634934 C1orf87Q8N0U7 546 aa12.14□□□□□ -0.47
LINC00339-208ENST00000634934 GCSAMQ8N6F7 178 aa12.14□□□□□ -0.47
LINC00339-208ENST00000634934 POC1AQ8NBT0 407 aa12.14□□□□□ -0.47
LINC00339-208ENST00000634934 PXT1Q8NFP0 134 aa12.14□□□□□ -0.47
LINC00339-208ENST00000634934 OR10Z1Q8NGY1 313 aa12.14□□□□□ -0.47
LINC00339-208ENST00000634934 GPX8Q8TED1 209 aa12.14□□□□□ -0.47
LINC00339-208ENST00000634934 SLC25A28Q96A46 364 aa12.14□□□□□ -0.47
LINC00339-208ENST00000634934 SLC25A21Q9BQT8 299 aaPredicted RBP12.14□□□□□ -0.47
LINC00339-208ENST00000634934 KCNK15Q9H427 330 aa12.14□□□□□ -0.47
LINC00339-208ENST00000634934 CHD3Q12873 2000 aaKnown RBP12.13□□□□□ -0.47
LINC00339-208ENST00000634934 F8VVB4 439 aa12.13□□□□□ -0.47
LINC00339-208ENST00000634934 F8VWA3 439 aa12.13□□□□□ -0.47
LINC00339-208ENST00000634934 TMEM178BH3BS89 294 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms