RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 CGB7P0DN87 165 aa9.04□□□□□ -0.96
DDX41-219ENST00000629036 SAA4P35542 130 aa9.04□□□□□ -0.96
DDX41-219ENST00000629036 GDNFP39905 211 aa9.04□□□□□ -0.96
DDX41-219ENST00000629036 COMPP49747 757 aaPredicted RBP9.04□□□□□ -0.96
DDX41-219ENST00000629036 UBE2E1P51965 193 aa9.04□□□□□ -0.96
DDX41-219ENST00000629036 RBM11P57052 281 aaKnown RBP9.04□□□□□ -0.96
DDX41-219ENST00000629036 PPP3R1P63098 170 aa9.04□□□□□ -0.96
DDX41-219ENST00000629036 MEF2CQ06413 473 aaPredicted RBP9.04□□□□□ -0.96
DDX41-219ENST00000629036 MED22Q15528 200 aa9.04□□□□□ -0.96
DDX41-219ENST00000629036 GRK1Q15835 563 aa9.04□□□□□ -0.96
DDX41-219ENST00000629036 ACSM3Q53FZ2 586 aa9.04□□□□□ -0.96
DDX41-219ENST00000629036 PDLIM3Q53GG5 364 aaPredicted RBP9.04□□□□□ -0.96
DDX41-219ENST00000629036 UTF1Q5T230 341 aa9.04□□□□□ -0.96
DDX41-219ENST00000629036 SATL1Q86VE3 508 aa9.04□□□□□ -0.96
DDX41-219ENST00000629036 CDH26Q8IXH8 852 aa9.04□□□□□ -0.96
DDX41-219ENST00000629036 CMTM4Q8IZR5 234 aa9.04□□□□□ -0.96
DDX41-219ENST00000629036 MS4A15Q8N5U1 240 aa9.04□□□□□ -0.96
DDX41-219ENST00000629036 CHST4Q8NCG5 386 aa9.04□□□□□ -0.96
DDX41-219ENST00000629036 TMED9Q9BVK6 235 aa9.04□□□□□ -0.96
DDX41-219ENST00000629036 PPA2Q9H2U2 334 aa9.04□□□□□ -0.96
DDX41-219ENST00000629036 NEK6Q9HC98 313 aa9.04□□□□□ -0.96
DDX41-219ENST00000629036 ZNRD1Q9P1U0 126 aa9.04□□□□□ -0.96
DDX41-219ENST00000629036 RCC2Q9P258 522 aaKnown RBP9.04□□□□□ -0.96
DDX41-219ENST00000629036 LINC00312Q9Y6C7 94 aa9.04□□□□□ -0.96
DDX41-219ENST00000629036 TMEM89A2RUT3 159 aa9.03□□□□□ -0.96
DDX41-219ENST00000629036 FAM90A8PA6NJQ4 464 aa9.03□□□□□ -0.96
DDX41-219ENST00000629036 SH2D1BO14796 132 aa9.03□□□□□ -0.96
DDX41-219ENST00000629036 HOXA3O43365 443 aaPredicted RBP9.03□□□□□ -0.96
DDX41-219ENST00000629036 OCMP0CE72 109 aaPredicted RBP9.03□□□□□ -0.96
DDX41-219ENST00000629036 GABRR1P24046 479 aa9.03□□□□□ -0.96
DDX41-219ENST00000629036 GLIPR1P48060 266 aa9.03□□□□□ -0.96
DDX41-219ENST00000629036 BMXP51813 675 aa9.03□□□□□ -0.96
DDX41-219ENST00000629036 FABP5Q01469 135 aa9.03□□□□□ -0.96
DDX41-219ENST00000629036 EMX1Q04741 257 aaPredicted RBP9.03□□□□□ -0.96
DDX41-219ENST00000629036 EDDM3AQ14507 147 aa9.03□□□□□ -0.96
DDX41-219ENST00000629036 RSBN1Q5VWQ0 802 aaPredicted RBP9.03□□□□□ -0.96
DDX41-219ENST00000629036 NCR3LG1Q68D85 454 aa9.03□□□□□ -0.96
DDX41-219ENST00000629036 FIP1L1Q6UN15 594 aaKnown RBP9.03□□□□□ -0.96
DDX41-219ENST00000629036 BAIAP2L2Q6UXY1 529 aa9.03□□□□□ -0.96
DDX41-219ENST00000629036 GDPD3Q7L5L3 318 aa9.03□□□□□ -0.96
DDX41-219ENST00000629036 TMEM104Q8NE00 496 aa9.03□□□□□ -0.96
DDX41-219ENST00000629036 OR5D13Q8NGL4 314 aa9.03□□□□□ -0.96
DDX41-219ENST00000629036 PLPPR1Q8TBJ4 325 aa9.03□□□□□ -0.96
DDX41-219ENST00000629036 TBC1D15Q8TC07 691 aa9.03□□□□□ -0.96
DDX41-219ENST00000629036 PHYHIPQ92561 330 aa9.03□□□□□ -0.96
DDX41-219ENST00000629036 TAF15Q92804 592 aaKnown RBP eCLIP9.03□□□□□ -0.96
DDX41-219ENST00000629036 CORO2AQ92828 525 aa9.03□□□□□ -0.96
DDX41-219ENST00000629036 MUL1Q969V5 352 aa9.03□□□□□ -0.96
DDX41-219ENST00000629036 CPNE2Q96FN4 548 aaPredicted RBP9.03□□□□□ -0.96
DDX41-219ENST00000629036 JMJD8Q96S16 334 aa9.03□□□□□ -0.96
DDX41-219ENST00000629036 MGLLQ99685 303 aa9.03□□□□□ -0.96
DDX41-219ENST00000629036 ZMAT3Q9HA38 289 aaKnown RBP9.03□□□□□ -0.96
DDX41-219ENST00000629036 A0A1W2PRD5 423 aa9.02□□□□□ -0.97
DDX41-219ENST00000629036 A0A1W2PRF3 423 aa9.02□□□□□ -0.97
DDX41-219ENST00000629036 A0A1W2PRM7 423 aa9.02□□□□□ -0.97
DDX41-219ENST00000629036 SHISA3A0PJX4 238 aa9.02□□□□□ -0.97
DDX41-219ENST00000629036 ODAMA1E959 279 aa9.02□□□□□ -0.97
DDX41-219ENST00000629036 TRIM77I1YAP6 450 aa9.02□□□□□ -0.97
DDX41-219ENST00000629036 GEMIN2O14893 280 aaKnown RBP9.02□□□□□ -0.97
DDX41-219ENST00000629036 IGHV4-59P01825 116 aa9.02□□□□□ -0.97
DDX41-219ENST00000629036 MAS1P04201 325 aa9.02□□□□□ -0.97
DDX41-219ENST00000629036 IGHV1-8P0DP01 117 aa9.02□□□□□ -0.97
DDX41-219ENST00000629036 MAPK3P27361 379 aaPredicted RBP9.02□□□□□ -0.97
DDX41-219ENST00000629036 IER3P46695 156 aa9.02□□□□□ -0.97
DDX41-219ENST00000629036 EDDM3BP56851 147 aa9.02□□□□□ -0.97
DDX41-219ENST00000629036 QRFPP83859 136 aa9.02□□□□□ -0.97
DDX41-219ENST00000629036 RELBQ01201 579 aa9.02□□□□□ -0.97
DDX41-219ENST00000629036 GUCA2AQ02747 115 aa9.02□□□□□ -0.97
DDX41-219ENST00000629036 AESQ08117 197 aa9.02□□□□□ -0.97
DDX41-219ENST00000629036 BAMBIQ13145 260 aa9.02□□□□□ -0.97
DDX41-219ENST00000629036 ATXN7L3Q14CW9 347 aaPredicted RBP9.02□□□□□ -0.97
DDX41-219ENST00000629036 TAF9Q16594 264 aa9.02□□□□□ -0.97
DDX41-219ENST00000629036 C17orf58Q2M2W7 97 aa9.02□□□□□ -0.97
DDX41-219ENST00000629036 C1orf100Q5SVJ3 147 aa9.02□□□□□ -0.97
DDX41-219ENST00000629036 UBE2UQ5VVX9 321 aa9.02□□□□□ -0.97
DDX41-219ENST00000629036 ZNF626Q68DY1 528 aa9.02□□□□□ -0.97
DDX41-219ENST00000629036 SIGIRRQ6IA17 410 aa9.02□□□□□ -0.97
DDX41-219ENST00000629036 CD200R1LQ6Q8B3 271 aa9.02□□□□□ -0.97
DDX41-219ENST00000629036 ZNF782Q6ZMW2 699 aaPredicted RBP9.02□□□□□ -0.97
DDX41-219ENST00000629036 ZNF367Q7RTV3 350 aa9.02□□□□□ -0.97
DDX41-219ENST00000629036 SPARTQ8N0X7 666 aa9.02□□□□□ -0.97
DDX41-219ENST00000629036 DYNAPQ8N1N2 210 aa9.02□□□□□ -0.97
DDX41-219ENST00000629036 TMEM86BQ8N661 226 aa9.02□□□□□ -0.97
DDX41-219ENST00000629036 NKAIN3Q8N8D7 197 aa9.02□□□□□ -0.97
DDX41-219ENST00000629036 THRSPQ92748 146 aa9.02□□□□□ -0.97
DDX41-219ENST00000629036 UFD1Q92890 307 aa9.02□□□□□ -0.97
DDX41-219ENST00000629036 SLC25A28Q96A46 364 aa9.02□□□□□ -0.97
DDX41-219ENST00000629036 GPER1Q99527 375 aa9.02□□□□□ -0.97
DDX41-219ENST00000629036 UQCC2Q9BRT2 126 aa9.02□□□□□ -0.97
DDX41-219ENST00000629036 CHIAQ9BZP6 476 aa9.02□□□□□ -0.97
DDX41-219ENST00000629036 FAM192AQ9GZU8 254 aa9.02□□□□□ -0.97
DDX41-219ENST00000629036 LINC00574Q9H8X3 128 aa9.02□□□□□ -0.97
DDX41-219ENST00000629036 NDUFB11Q9NX14 153 aa9.02□□□□□ -0.97
DDX41-219ENST00000629036 CKLFQ9UBR5 152 aa9.02□□□□□ -0.97
DDX41-219ENST00000629036 MRPS28Q9Y2Q9 187 aaKnown RBP9.02□□□□□ -0.97
DDX41-219ENST00000629036 WNK1Q9H4A3 2382 aa9.01□□□□□ -0.97
DDX41-219ENST00000629036 MAGEB3O15480 346 aa9.01□□□□□ -0.97
DDX41-219ENST00000629036 MRPS14O60783 128 aaKnown RBP9.01□□□□□ -0.97
DDX41-219ENST00000629036 CLPXO76031 633 aa9.01□□□□□ -0.97
DDX41-219ENST00000629036 HTR3BO95264 441 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms