RNA–Protein interactions for RNA: ENST00000628347.1

SOX2-OT-247, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 445 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-247ENST00000628347 WFDC9Q8NEX5 89 aa9.97□□□□□ -0.81
SOX2-OT-247ENST00000628347 OR13C3Q8NGS6 347 aa9.97□□□□□ -0.81
SOX2-OT-247ENST00000628347 OR13C9Q8NGT0 318 aa9.97□□□□□ -0.81
SOX2-OT-247ENST00000628347 RFT1Q96AA3 541 aa9.97□□□□□ -0.81
SOX2-OT-247ENST00000628347 CREB3L1Q96BA8 519 aa9.97□□□□□ -0.81
SOX2-OT-247ENST00000628347 LGALS12Q96DT0 336 aa9.97□□□□□ -0.81
SOX2-OT-247ENST00000628347 C4orf36Q96KX1 117 aa9.97□□□□□ -0.81
SOX2-OT-247ENST00000628347 ZCCHC4Q9H5U6 513 aa9.97□□□□□ -0.81
SOX2-OT-247ENST00000628347 NECAP2Q9NVZ3 263 aa9.97□□□□□ -0.81
SOX2-OT-247ENST00000628347 ZNF729A6NN14 1252 aaPredicted RBP9.96□□□□□ -0.82
SOX2-OT-247ENST00000628347 OOSP1A8MZH6 123 aa9.96□□□□□ -0.82
SOX2-OT-247ENST00000628347 J3QLW9 94 aa9.96□□□□□ -0.82
SOX2-OT-247ENST00000628347 SLC33A1O00400 549 aaPredicted RBP9.96□□□□□ -0.82
SOX2-OT-247ENST00000628347 EI24O14681 340 aa9.96□□□□□ -0.82
SOX2-OT-247ENST00000628347 OR2F2O95006 317 aa9.96□□□□□ -0.82
SOX2-OT-247ENST00000628347 DBTP11182 482 aaKnown RBP9.96□□□□□ -0.82
SOX2-OT-247ENST00000628347 ZNF44P15621 663 aa9.96□□□□□ -0.82
SOX2-OT-247ENST00000628347 ZNF19P17023 458 aa9.96□□□□□ -0.82
SOX2-OT-247ENST00000628347 GABRB1P18505 474 aa9.96□□□□□ -0.82
SOX2-OT-247ENST00000628347 GDNFP39905 211 aa9.96□□□□□ -0.82
SOX2-OT-247ENST00000628347 CEACAM3P40198 252 aa9.96□□□□□ -0.82
SOX2-OT-247ENST00000628347 PTGFRP43088 359 aa9.96□□□□□ -0.82
SOX2-OT-247ENST00000628347 ZP1P60852 638 aa9.96□□□□□ -0.82
SOX2-OT-247ENST00000628347 AESQ08117 197 aa9.96□□□□□ -0.82
SOX2-OT-247ENST00000628347 MRPL28Q13084 256 aaKnown RBP9.96□□□□□ -0.82
SOX2-OT-247ENST00000628347 GALEQ14376 348 aa9.96□□□□□ -0.82
SOX2-OT-247ENST00000628347 HLA-DRB5Q30154 266 aa9.96□□□□□ -0.82
SOX2-OT-247ENST00000628347 OXLD1Q5BKU9 147 aa9.96□□□□□ -0.82
SOX2-OT-247ENST00000628347 OR5AU1Q8NGC0 362 aa9.96□□□□□ -0.82
SOX2-OT-247ENST00000628347 PYDC1Q8WXC3 89 aa9.96□□□□□ -0.82
SOX2-OT-247ENST00000628347 COQ2Q96H96 371 aa9.96□□□□□ -0.82
SOX2-OT-247ENST00000628347 RBM14Q96PK6 669 aaKnown RBP9.96□□□□□ -0.82
SOX2-OT-247ENST00000628347 SPACA5Q96QH8 159 aa9.96□□□□□ -0.82
SOX2-OT-247ENST00000628347 OR5M11Q96RB7 305 aa9.96□□□□□ -0.82
SOX2-OT-247ENST00000628347 NCOR1P1Q9H4R4 102 aa9.96□□□□□ -0.82
SOX2-OT-247ENST00000628347 ZNF286AQ9HBT8 521 aa9.96□□□□□ -0.82
SOX2-OT-247ENST00000628347 MYRFQ9Y2G1 1151 aa9.96□□□□□ -0.82
SOX2-OT-247ENST00000628347 TMEM212A6NML5 194 aa9.95□□□□□ -0.82
SOX2-OT-247ENST00000628347 H3BNX3 289 aa9.95□□□□□ -0.82
SOX2-OT-247ENST00000628347 LY6LH3BQJ8 138 aa9.95□□□□□ -0.82
SOX2-OT-247ENST00000628347 BUB1B-PAK6H3BSN5 160 aa9.95□□□□□ -0.82
SOX2-OT-247ENST00000628347 PIN1P1O15428 100 aa9.95□□□□□ -0.82
SOX2-OT-247ENST00000628347 SULT1B1O43704 296 aa9.95□□□□□ -0.82
SOX2-OT-247ENST00000628347 PRB2P02812 416 aaPredicted RBP9.95□□□□□ -0.82
SOX2-OT-247ENST00000628347 CGB3P0DN86 165 aa9.95□□□□□ -0.82
SOX2-OT-247ENST00000628347 CGB7P0DN87 165 aa9.95□□□□□ -0.82
SOX2-OT-247ENST00000628347 MTNR1BP49286 362 aa9.95□□□□□ -0.82
SOX2-OT-247ENST00000628347 KPNB1Q14974 876 aaKnown RBP9.95□□□□□ -0.82
SOX2-OT-247ENST00000628347 CDK5R1Q15078 307 aa9.95□□□□□ -0.82
SOX2-OT-247ENST00000628347 KISS1Q15726 138 aa9.95□□□□□ -0.82
SOX2-OT-247ENST00000628347 C17orf58Q2M2W7 97 aa9.95□□□□□ -0.82
SOX2-OT-247ENST00000628347 KRBOX4Q5JUW0 171 aa9.95□□□□□ -0.82
SOX2-OT-247ENST00000628347 TPTE2P1Q5T6R2 138 aa9.95□□□□□ -0.82
SOX2-OT-247ENST00000628347 ELP2Q6IA86 826 aa9.95□□□□□ -0.82
SOX2-OT-247ENST00000628347 CCDC144NLQ6NUI1 221 aa9.95□□□□□ -0.82
SOX2-OT-247ENST00000628347 ZFP1Q6P2D0 407 aa9.95□□□□□ -0.82
SOX2-OT-247ENST00000628347 SERPINA12Q8IW75 414 aa9.95□□□□□ -0.82
SOX2-OT-247ENST00000628347 PARP16Q8N5Y8 322 aa9.95□□□□□ -0.82
SOX2-OT-247ENST00000628347 PXT1Q8NFP0 134 aa9.95□□□□□ -0.82
SOX2-OT-247ENST00000628347 OR4D6Q8NGJ1 314 aa9.95□□□□□ -0.82
SOX2-OT-247ENST00000628347 OR5D18Q8NGL1 313 aa9.95□□□□□ -0.82
SOX2-OT-247ENST00000628347 OR5D14Q8NGL3 314 aa9.95□□□□□ -0.82
SOX2-OT-247ENST00000628347 CAPSLQ8WWF8 208 aa9.95□□□□□ -0.82
SOX2-OT-247ENST00000628347 PHF21AQ96BD5 680 aa9.95□□□□□ -0.82
SOX2-OT-247ENST00000628347 ZNF649Q9BS31 505 aa9.95□□□□□ -0.82
SOX2-OT-247ENST00000628347 SLC25A33Q9BSK2 321 aa9.95□□□□□ -0.82
SOX2-OT-247ENST00000628347 ALG8Q9BVK2 526 aa9.95□□□□□ -0.82
SOX2-OT-247ENST00000628347 INPP5EQ9NRR6 644 aa9.95□□□□□ -0.82
SOX2-OT-247ENST00000628347 OR6C3Q9NZP0 311 aa9.95□□□□□ -0.82
SOX2-OT-247ENST00000628347 FAM90A18PA6NE21 464 aa9.94□□□□□ -0.82
SOX2-OT-247ENST00000628347 FAM90A16PA6NEW6 464 aa9.94□□□□□ -0.82
SOX2-OT-247ENST00000628347 FAM90A20PA6NIJ5 464 aa9.94□□□□□ -0.82
SOX2-OT-247ENST00000628347 FAM90A9PA6NNJ1 464 aa9.94□□□□□ -0.82
SOX2-OT-247ENST00000628347 FAM90A12PA8MX19 464 aa9.94□□□□□ -0.82
SOX2-OT-247ENST00000628347 FAM90A5PA8MXJ8 464 aa9.94□□□□□ -0.82
SOX2-OT-247ENST00000628347 M0QZK8 103 aa9.94□□□□□ -0.82
SOX2-OT-247ENST00000628347 TOR1AO14656 332 aa9.94□□□□□ -0.82
SOX2-OT-247ENST00000628347 DEGS1O15121 323 aa9.94□□□□□ -0.82
SOX2-OT-247ENST00000628347 MPZL2O60487 215 aa9.94□□□□□ -0.82
SOX2-OT-247ENST00000628347 CCDC159P0C7I6 412 aa9.94□□□□□ -0.82
SOX2-OT-247ENST00000628347 FAM90A15PP0C7V4 464 aa9.94□□□□□ -0.82
SOX2-OT-247ENST00000628347 FAM90A13PP0C7W8 464 aa9.94□□□□□ -0.82
SOX2-OT-247ENST00000628347 FAM90A14PP0C7W9 464 aa9.94□□□□□ -0.82
SOX2-OT-247ENST00000628347 FAM90A24PP0C7X0 464 aa9.94□□□□□ -0.82
SOX2-OT-247ENST00000628347 PRRX1P54821 245 aa9.94□□□□□ -0.82
SOX2-OT-247ENST00000628347 PAX5Q02548 391 aa9.94□□□□□ -0.82
SOX2-OT-247ENST00000628347 IL13RA2Q14627 380 aa9.94□□□□□ -0.82
SOX2-OT-247ENST00000628347 ZIK1Q3SY52 487 aaPredicted RBP9.94□□□□□ -0.82
SOX2-OT-247ENST00000628347 TCTEX1D4Q5JR98 221 aa9.94□□□□□ -0.82
SOX2-OT-247ENST00000628347 ZNF691Q5VV52 312 aa9.94□□□□□ -0.82
SOX2-OT-247ENST00000628347 ZNF529Q6P280 563 aa9.94□□□□□ -0.82
SOX2-OT-247ENST00000628347 LHFPL3Q86UP9 236 aa9.94□□□□□ -0.82
SOX2-OT-247ENST00000628347 Q8NFD4 153 aa9.94□□□□□ -0.82
SOX2-OT-247ENST00000628347 OR51T1Q8NGJ9 327 aa9.94□□□□□ -0.82
SOX2-OT-247ENST00000628347 RHOXF1Q8NHV9 184 aa9.94□□□□□ -0.82
SOX2-OT-247ENST00000628347 HAVCR2Q8TDQ0 301 aa9.94□□□□□ -0.82
SOX2-OT-247ENST00000628347 STMN2Q93045 179 aa9.94□□□□□ -0.82
SOX2-OT-247ENST00000628347 CPNE2Q96FN4 548 aaPredicted RBP9.94□□□□□ -0.82
SOX2-OT-247ENST00000628347 LINC00574Q9H8X3 128 aa9.94□□□□□ -0.82
SOX2-OT-247ENST00000628347 PCDHB16Q9NRJ7 776 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms