RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 SLC25A30Q5SVS4 291 aa11.27□□□□□ -0.61
SCN8A-209ENST00000627620 FAHD2BQ6P2I3 314 aaPredicted RBP11.27□□□□□ -0.61
SCN8A-209ENST00000627620 OR52L2PQ8NGH6 319 aa11.27□□□□□ -0.61
SCN8A-209ENST00000627620 FAHD2AQ96GK7 314 aa11.27□□□□□ -0.61
SCN8A-209ENST00000627620 GSTZ1O43708 216 aaPredicted RBP11.27□□□□□ -0.61
SCN8A-209ENST00000627620 SNCGO76070 127 aa11.27□□□□□ -0.61
SCN8A-209ENST00000627620 PEBP1P30086 187 aaKnown RBP11.27□□□□□ -0.61
SCN8A-209ENST00000627620 PMELP40967 661 aa11.27□□□□□ -0.61
SCN8A-209ENST00000627620 IL24Q13007 206 aa11.27□□□□□ -0.61
SCN8A-209ENST00000627620 SURF2Q15527 256 aaPredicted RBP11.27□□□□□ -0.61
SCN8A-209ENST00000627620 CLEC18BQ6UXF7 455 aa11.27□□□□□ -0.61
SCN8A-209ENST00000627620 TRBV5-3A0A0A0MS03 114 aa11.27□□□□□ -0.61
SCN8A-209ENST00000627620 MS4A18H0YCH9 400 aa11.27□□□□□ -0.61
SCN8A-209ENST00000627620 CTDSPLO15194 276 aa11.27□□□□□ -0.61
SCN8A-209ENST00000627620 MOSPD3O75425 235 aa11.27□□□□□ -0.61
SCN8A-209ENST00000627620 LIFP15018 202 aa11.27□□□□□ -0.61
SCN8A-209ENST00000627620 MS4A18Q3C1V0 323 aa11.27□□□□□ -0.61
SCN8A-209ENST00000627620 DCAF10Q5QP82 559 aa11.27□□□□□ -0.61
SCN8A-209ENST00000627620 OR1B1Q8NGR6 318 aa11.27□□□□□ -0.61
SCN8A-209ENST00000627620 RNF7Q9UBF6 113 aa11.27□□□□□ -0.61
SCN8A-209ENST00000627620 CYB5R1Q9UHQ9 305 aa11.27□□□□□ -0.61
SCN8A-209ENST00000627620 GATCO43716 136 aaKnown RBP11.26□□□□□ -0.61
SCN8A-209ENST00000627620 DYNLT3P51808 116 aa11.26□□□□□ -0.61
SCN8A-209ENST00000627620 VAMP3Q15836 100 aa11.26□□□□□ -0.61
SCN8A-209ENST00000627620 C12orf57Q99622 126 aa11.26□□□□□ -0.61
SCN8A-209ENST00000627620 MMP24Q9Y5R2 645 aa11.26□□□□□ -0.61
SCN8A-209ENST00000627620 SYNGR2O43760 224 aa11.26□□□□□ -0.61
SCN8A-209ENST00000627620 ZNF788Q6ZQV5 615 aa11.26□□□□□ -0.61
SCN8A-209ENST00000627620 WDR54Q9H977 334 aa11.26□□□□□ -0.61
SCN8A-209ENST00000627620 TMEM38BQ9NVV0 291 aa11.26□□□□□ -0.61
SCN8A-209ENST00000627620 DUSP18Q8NEJ0 188 aa11.26□□□□□ -0.61
SCN8A-209ENST00000627620 CES1P1Q9UKY3 287 aa11.26□□□□□ -0.61
SCN8A-209ENST00000627620 OR4C45A6NMZ5 311 aa11.26□□□□□ -0.61
SCN8A-209ENST00000627620 FOXS1O43638 330 aa11.26□□□□□ -0.61
SCN8A-209ENST00000627620 BRS3P32247 399 aa11.26□□□□□ -0.61
SCN8A-209ENST00000627620 HIST1H3AP68431 136 aa11.26□□□□□ -0.61
SCN8A-209ENST00000627620 GAPTQ8N292 157 aa11.26□□□□□ -0.61
SCN8A-209ENST00000627620 TMEM52Q8NDY8 209 aa11.26□□□□□ -0.61
SCN8A-209ENST00000627620 TMEM208Q9BTX3 173 aa11.26□□□□□ -0.61
SCN8A-209ENST00000627620 ABHD14AQ9BUJ0 271 aa11.26□□□□□ -0.61
SCN8A-209ENST00000627620 KIAA1324LA8MWY0 1029 aaPredicted RBP11.25□□□□□ -0.61
SCN8A-209ENST00000627620 CD82P27701 267 aa11.25□□□□□ -0.61
SCN8A-209ENST00000627620 LGALS7P47929 136 aa11.25□□□□□ -0.61
SCN8A-209ENST00000627620 RANP62826 216 aaKnown RBP11.25□□□□□ -0.61
SCN8A-209ENST00000627620 TOLLIPQ9H0E2 274 aa11.25□□□□□ -0.61
SCN8A-209ENST00000627620 UBTD1Q9HAC8 227 aa11.25□□□□□ -0.61
SCN8A-209ENST00000627620 COA4Q9NYJ1 87 aa11.25□□□□□ -0.61
SCN8A-209ENST00000627620 DTX4Q9Y2E6 619 aa11.25□□□□□ -0.61
SCN8A-209ENST00000627620 SMCHD1A6NHR9 2005 aa11.25□□□□□ -0.61
SCN8A-209ENST00000627620 A0A1W2PNV4 684 aa11.25□□□□□ -0.61
SCN8A-209ENST00000627620 B3GALNT1O75752 331 aa11.25□□□□□ -0.61
SCN8A-209ENST00000627620 PHYHIPLQ96FC7 376 aa11.25□□□□□ -0.61
SCN8A-209ENST00000627620 LRRC3BQ96PB8 259 aa11.25□□□□□ -0.61
SCN8A-209ENST00000627620 CA10Q9NS85 328 aa11.25□□□□□ -0.61
SCN8A-209ENST00000627620 HMSDA8MTL9 139 aa11.25□□□□□ -0.61
SCN8A-209ENST00000627620 IGHV4-34P06331 123 aa11.25□□□□□ -0.61
SCN8A-209ENST00000627620 UBE2L3P68036 154 aaKnown RBP11.25□□□□□ -0.61
SCN8A-209ENST00000627620 ISXQ2M1V0 245 aa11.25□□□□□ -0.61
SCN8A-209ENST00000627620 C10orf111Q8N326 155 aa11.25□□□□□ -0.61
SCN8A-209ENST00000627620 PAPPAQ13219 1627 aa11.25□□□□□ -0.61
SCN8A-209ENST00000627620 F2RL2O00254 374 aa11.25□□□□□ -0.61
SCN8A-209ENST00000627620 GZMHP20718 246 aa11.25□□□□□ -0.61
SCN8A-209ENST00000627620 RPEL1Q2QD12 228 aa11.25□□□□□ -0.61
SCN8A-209ENST00000627620 SEZ6L2Q6UXD5 910 aa11.25□□□□□ -0.61
SCN8A-209ENST00000627620 ZNF721Q8TF20 911 aa11.25□□□□□ -0.61
SCN8A-209ENST00000627620 RNF133Q8WVZ7 376 aa11.25□□□□□ -0.61
SCN8A-209ENST00000627620 VAMP8Q9BV40 100 aa11.25□□□□□ -0.61
SCN8A-209ENST00000627620 RBM38Q9H0Z9 239 aaKnown RBP11.25□□□□□ -0.61
SCN8A-209ENST00000627620 J3QT63 122 aa11.25□□□□□ -0.61
SCN8A-209ENST00000627620 FCN1O00602 326 aa11.25□□□□□ -0.61
SCN8A-209ENST00000627620 RPL13AP40429 203 aaKnown RBP11.25□□□□□ -0.61
SCN8A-209ENST00000627620 SLC25A40Q8TBP6 338 aa11.25□□□□□ -0.61
SCN8A-209ENST00000627620 ASB5Q8WWX0 329 aa11.25□□□□□ -0.61
SCN8A-209ENST00000627620 DPF1Q92782 380 aa11.25□□□□□ -0.61
SCN8A-209ENST00000627620 CCL28Q9NRJ3 127 aa11.25□□□□□ -0.61
SCN8A-209ENST00000627620 NPIPB8E9PQR5 432 aa11.24□□□□□ -0.61
SCN8A-209ENST00000627620 HLA-GP17693 338 aa11.24□□□□□ -0.61
SCN8A-209ENST00000627620 RPS4Y1P22090 263 aaKnown RBP11.24□□□□□ -0.61
SCN8A-209ENST00000627620 HTR1DP28221 377 aa11.24□□□□□ -0.61
SCN8A-209ENST00000627620 P2RY1P47900 373 aa11.24□□□□□ -0.61
SCN8A-209ENST00000627620 ZNF665Q9H7R5 613 aa11.24□□□□□ -0.61
SCN8A-209ENST00000627620 CHST1O43916 411 aa11.24□□□□□ -0.61
SCN8A-209ENST00000627620 SPCS3P61009 180 aa11.24□□□□□ -0.61
SCN8A-209ENST00000627620 TOMM20LQ6UXN7 152 aa11.24□□□□□ -0.61
SCN8A-209ENST00000627620 SFTPA2Q8IWL1 248 aa11.24□□□□□ -0.61
SCN8A-209ENST00000627620 PPYP01298 95 aa11.24□□□□□ -0.61
SCN8A-209ENST00000627620 C8orf82Q6P1X6 216 aaPredicted RBP11.24□□□□□ -0.61
SCN8A-209ENST00000627620 C19orf35Q6ZS72 473 aa11.24□□□□□ -0.61
SCN8A-209ENST00000627620 WDR31Q8NA23 367 aa11.24□□□□□ -0.61
SCN8A-209ENST00000627620 PRSS3P2Q8NHM4 247 aa11.24□□□□□ -0.61
SCN8A-209ENST00000627620 PARD6AQ9NPB6 346 aa11.24□□□□□ -0.61
SCN8A-209ENST00000627620 USP54Q70EL1 1684 aa11.24□□□□□ -0.61
SCN8A-209ENST00000627620 ZNF716A6NP11 495 aa11.24□□□□□ -0.61
SCN8A-209ENST00000627620 PIGYQ3MUY2 71 aa11.24□□□□□ -0.61
SCN8A-209ENST00000627620 SP7Q8TDD2 431 aaPredicted RBP11.24□□□□□ -0.61
SCN8A-209ENST00000627620 ATP5SQ99766 215 aa11.24□□□□□ -0.61
SCN8A-209ENST00000627620 ZNF426Q9BUY5 554 aa11.24□□□□□ -0.61
SCN8A-209ENST00000627620 ABCA3Q99758 1704 aa11.24□□□□□ -0.61
SCN8A-209ENST00000627620 MMP7P09237 267 aaPredicted RBP11.24□□□□□ -0.61
SCN8A-209ENST00000627620 HNRNPA3P51991 378 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms