RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 PSMD7P51665 324 aa16.7■□□□□ 0.26
PTCD3-220ENST00000627371 SCGB2A2Q13296 93 aa16.7■□□□□ 0.26
PTCD3-220ENST00000627371 EDDM3AQ14507 147 aa16.7■□□□□ 0.26
PTCD3-220ENST00000627371 MPV17LQ2QL34 196 aa16.7■□□□□ 0.26
PTCD3-220ENST00000627371 TMEM200BQ69YZ2 307 aa16.7■□□□□ 0.26
PTCD3-220ENST00000627371 TMEM104Q8NE00 496 aa16.7■□□□□ 0.26
PTCD3-220ENST00000627371 POM121Q96HA1 1249 aa16.7■□□□□ 0.26
PTCD3-220ENST00000627371 CST11Q9H112 138 aa16.7■□□□□ 0.26
PTCD3-220ENST00000627371 OR51E2Q9H255 320 aa16.7■□□□□ 0.26
PTCD3-220ENST00000627371 PPA2Q9H2U2 334 aa16.7■□□□□ 0.26
PTCD3-220ENST00000627371 PLGRKTQ9HBL7 147 aa16.7■□□□□ 0.26
PTCD3-220ENST00000627371 V9GY05 133 aa16.7■□□□□ 0.26
PTCD3-220ENST00000627371 TRAV24A0A0B4J272 114 aa16.69■□□□□ 0.26
PTCD3-220ENST00000627371 TRAV40A0A0B4J280 105 aa16.69■□□□□ 0.26
PTCD3-220ENST00000627371 A0A1W2PPH5 198 aa16.69■□□□□ 0.26
PTCD3-220ENST00000627371 CRTAPO75718 401 aaPredicted RBP16.69■□□□□ 0.26
PTCD3-220ENST00000627371 OR7C1O76099 320 aaPredicted RBP16.69■□□□□ 0.26
PTCD3-220ENST00000627371 SMIM18P0DKX4 95 aa16.69■□□□□ 0.26
PTCD3-220ENST00000627371 MGMTP16455 207 aa16.69■□□□□ 0.26
PTCD3-220ENST00000627371 EPHA1P21709 976 aa16.69■□□□□ 0.26
PTCD3-220ENST00000627371 GADD45AP24522 165 aa16.69■□□□□ 0.26
PTCD3-220ENST00000627371 MEF2CQ06413 473 aaPredicted RBP16.69■□□□□ 0.26
PTCD3-220ENST00000627371 ZNF273Q14593 569 aa16.69■□□□□ 0.26
PTCD3-220ENST00000627371 C1orf122Q6ZSJ8 110 aa16.69■□□□□ 0.26
PTCD3-220ENST00000627371 Q8N7P7 452 aa16.69■□□□□ 0.26
PTCD3-220ENST00000627371 SLC25A28Q96A46 364 aa16.69■□□□□ 0.26
PTCD3-220ENST00000627371 BANF2Q9H503 90 aa16.69■□□□□ 0.26
PTCD3-220ENST00000627371 NUP50Q9UKX7 468 aa16.69■□□□□ 0.26
PTCD3-220ENST00000627371 BPNT1O95861 308 aa16.68■□□□□ 0.26
PTCD3-220ENST00000627371 IGHV4-38-2P0DP08 117 aa16.68■□□□□ 0.26
PTCD3-220ENST00000627371 VSIG8P0DPA2 414 aa16.68■□□□□ 0.26
PTCD3-220ENST00000627371 P2RX3P56373 397 aa16.68■□□□□ 0.26
PTCD3-220ENST00000627371 BLMHQ13867 455 aa16.68■□□□□ 0.26
PTCD3-220ENST00000627371 TAF9Q16594 264 aa16.68■□□□□ 0.26
PTCD3-220ENST00000627371 PAN3Q58A45 887 aaKnown RBP16.68■□□□□ 0.26
PTCD3-220ENST00000627371 VMO1Q7Z5L0 202 aa16.68■□□□□ 0.26
PTCD3-220ENST00000627371 TPRX1Q8N7U7 411 aa16.68■□□□□ 0.26
PTCD3-220ENST00000627371 Q96M66 194 aa16.68■□□□□ 0.26
PTCD3-220ENST00000627371 CHCHD6Q9BRQ6 235 aa16.68■□□□□ 0.26
PTCD3-220ENST00000627371 SELENOIQ9C0D9 397 aa16.68■□□□□ 0.26
PTCD3-220ENST00000627371 ZNF581Q9P0T4 197 aa16.68■□□□□ 0.26
PTCD3-220ENST00000627371 hADV38S2A0JD32 116 aa16.67■□□□□ 0.26
PTCD3-220ENST00000627371 FUOMA2VDF0 154 aa16.67■□□□□ 0.26
PTCD3-220ENST00000627371 FAM90A10PA6NDY2 464 aa16.67■□□□□ 0.26
PTCD3-220ENST00000627371 FAM90A18PA6NE21 464 aa16.67■□□□□ 0.26
PTCD3-220ENST00000627371 FAM90A16PA6NEW6 464 aa16.67■□□□□ 0.26
PTCD3-220ENST00000627371 FAM90A20PA6NIJ5 464 aa16.67■□□□□ 0.26
PTCD3-220ENST00000627371 FAM90A8PA6NJQ4 464 aa16.67■□□□□ 0.26
PTCD3-220ENST00000627371 FAM90A7PA6NKC0 464 aa16.67■□□□□ 0.26
PTCD3-220ENST00000627371 FAM90A22PA8MWA6 464 aa16.67■□□□□ 0.26
PTCD3-220ENST00000627371 FAM90A12PA8MX19 464 aa16.67■□□□□ 0.26
PTCD3-220ENST00000627371 FAM90A5PA8MXJ8 464 aa16.67■□□□□ 0.26
PTCD3-220ENST00000627371 FAM90A23PA8MXZ1 464 aa16.67■□□□□ 0.26
PTCD3-220ENST00000627371 HSPB6O14558 160 aa16.67■□□□□ 0.26
PTCD3-220ENST00000627371 FAM90A15PP0C7V4 464 aa16.67■□□□□ 0.26
PTCD3-220ENST00000627371 FAM90A13PP0C7W8 464 aa16.67■□□□□ 0.26
PTCD3-220ENST00000627371 FAM90A14PP0C7W9 464 aa16.67■□□□□ 0.26
PTCD3-220ENST00000627371 FAM90A24PP0C7X0 464 aa16.67■□□□□ 0.26
PTCD3-220ENST00000627371 RAB3BP20337 219 aa16.67■□□□□ 0.26
PTCD3-220ENST00000627371 RANBP1P43487 201 aa16.67■□□□□ 0.26
PTCD3-220ENST00000627371 KCNJ3P48549 501 aa16.67■□□□□ 0.26
PTCD3-220ENST00000627371 OR10A3P58181 314 aa16.67■□□□□ 0.26
PTCD3-220ENST00000627371 ATXN7L3Q14CW9 347 aaPredicted RBP16.67■□□□□ 0.26
PTCD3-220ENST00000627371 RAB11BQ15907 218 aa16.67■□□□□ 0.26
PTCD3-220ENST00000627371 GPR157Q5UAW9 335 aa16.67■□□□□ 0.26
PTCD3-220ENST00000627371 TCF23Q7RTU1 214 aa16.67■□□□□ 0.26
PTCD3-220ENST00000627371 SUMF2Q8NBJ7 301 aa16.67■□□□□ 0.26
PTCD3-220ENST00000627371 FAM46BQ96A09 425 aa16.67■□□□□ 0.26
PTCD3-220ENST00000627371 YIPF6Q96EC8 236 aa16.67■□□□□ 0.26
PTCD3-220ENST00000627371 COQ2Q96H96 371 aa16.67■□□□□ 0.26
PTCD3-220ENST00000627371 METTL8Q9H825 291 aaKnown RBP16.67■□□□□ 0.26
PTCD3-220ENST00000627371 UNKLQ9H9P5 680 aaKnown RBP16.67■□□□□ 0.26
PTCD3-220ENST00000627371 LINC00312Q9Y6C7 94 aa16.67■□□□□ 0.26
PTCD3-220ENST00000627371 LOC100506127A0A0U1RQW1 187 aa16.66■□□□□ 0.26
PTCD3-220ENST00000627371 TMEM14DPA8MWL7 114 aa16.66■□□□□ 0.26
PTCD3-220ENST00000627371 MPIG6BO95866 241 aa16.66■□□□□ 0.26
PTCD3-220ENST00000627371 ARSBP15848 533 aa16.66■□□□□ 0.26
PTCD3-220ENST00000627371 CCL3L1P16619 93 aa16.66■□□□□ 0.26
PTCD3-220ENST00000627371 CFPP27918 469 aa16.66■□□□□ 0.26
PTCD3-220ENST00000627371 QRFPP83859 136 aa16.66■□□□□ 0.26
PTCD3-220ENST00000627371 AESQ08117 197 aa16.66■□□□□ 0.26
PTCD3-220ENST00000627371 UNC119Q13432 240 aa16.66■□□□□ 0.26
PTCD3-220ENST00000627371 P2RY14Q15391 338 aa16.66■□□□□ 0.26
PTCD3-220ENST00000627371 TIMM50Q3ZCQ8 353 aa16.66■□□□□ 0.26
PTCD3-220ENST00000627371 KRBOX4Q5JUW0 171 aa16.66■□□□□ 0.26
PTCD3-220ENST00000627371 METAP1DQ6UB28 335 aaPredicted RBP16.66■□□□□ 0.26
PTCD3-220ENST00000627371 KCNG3Q8TAE7 436 aa16.66■□□□□ 0.26
PTCD3-220ENST00000627371 KCTD7Q96MP8 289 aa16.66■□□□□ 0.26
PTCD3-220ENST00000627371 DPCDQ9BVM2 203 aaPredicted RBP16.66■□□□□ 0.26
PTCD3-220ENST00000627371 TMEM59Q9BXS4 323 aa16.66■□□□□ 0.26
PTCD3-220ENST00000627371 KCNK15Q9H427 330 aa16.66■□□□□ 0.26
PTCD3-220ENST00000627371 SPACA1Q9HBV2 294 aa16.66■□□□□ 0.26
PTCD3-220ENST00000627371 SIRT7Q9NRC8 400 aa16.66■□□□□ 0.26
PTCD3-220ENST00000627371 RCC2Q9P258 522 aaKnown RBP16.66■□□□□ 0.26
PTCD3-220ENST00000627371 IGHV3OR16-10A0A075B7F0 116 aa16.65■□□□□ 0.26
PTCD3-220ENST00000627371 CENPVL3A0A0U1RRI6 287 aa16.65■□□□□ 0.26
PTCD3-220ENST00000627371 IFNA2P01563 188 aa16.65■□□□□ 0.26
PTCD3-220ENST00000627371 PRTN3P24158 256 aa16.65■□□□□ 0.26
PTCD3-220ENST00000627371 DLX6P56179 175 aa16.65■□□□□ 0.26
PTCD3-220ENST00000627371 PAX5Q02548 391 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms