RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 HIST2H3AQ71DI3 136 aa9.71□□□□□ -0.85
VPS8-227ENST00000625842 OR8G5Q8NG78 346 aa9.71□□□□□ -0.85
VPS8-227ENST00000625842 R3HDM4Q96D70 268 aa9.71□□□□□ -0.85
VPS8-227ENST00000625842 SSBP3Q9BWW4 388 aaPredicted RBP9.71□□□□□ -0.85
VPS8-227ENST00000625842 SIGLEC7Q9Y286 467 aa9.71□□□□□ -0.85
VPS8-227ENST00000625842 GVINP1Q7Z2Y8 2422 aa9.71□□□□□ -0.86
VPS8-227ENST00000625842 A0A0J9YW62 118 aa9.71□□□□□ -0.86
VPS8-227ENST00000625842 IFITM5A6NNB3 132 aa9.71□□□□□ -0.86
VPS8-227ENST00000625842 FOXS1O43638 330 aa9.71□□□□□ -0.86
VPS8-227ENST00000625842 FUCA1P04066 466 aa9.71□□□□□ -0.86
VPS8-227ENST00000625842 MEF2CQ06413 473 aaPredicted RBP9.71□□□□□ -0.86
VPS8-227ENST00000625842 PJVKQ0ZLH3 352 aa9.71□□□□□ -0.86
VPS8-227ENST00000625842 ADIRFQ15847 76 aa9.71□□□□□ -0.86
VPS8-227ENST00000625842 C19orf54Q5BKX5 351 aa9.71□□□□□ -0.86
VPS8-227ENST00000625842 DEFB121Q5J5C9 76 aa9.71□□□□□ -0.86
VPS8-227ENST00000625842 LYPD4Q6UWN0 246 aa9.71□□□□□ -0.86
VPS8-227ENST00000625842 LYSMD2Q8IV50 215 aa9.71□□□□□ -0.86
VPS8-227ENST00000625842 RBM14Q96PK6 669 aaKnown RBP9.71□□□□□ -0.86
VPS8-227ENST00000625842 TMEM167BQ9NRX6 74 aa9.71□□□□□ -0.86
VPS8-227ENST00000625842 MOB4Q9Y3A3 225 aa9.71□□□□□ -0.86
VPS8-227ENST00000625842 SIRT4Q9Y6E7 314 aaPredicted RBP9.71□□□□□ -0.86
VPS8-227ENST00000625842 IGKV3-7A0A075B6H7 116 aa9.71□□□□□ -0.86
VPS8-227ENST00000625842 TRDCB7Z8K6 153 aa9.71□□□□□ -0.86
VPS8-227ENST00000625842 FMODQ06828 376 aa9.71□□□□□ -0.86
VPS8-227ENST00000625842 PDPNQ86YL7 162 aa9.71□□□□□ -0.86
VPS8-227ENST00000625842 KCNRGQ8N5I3 272 aa9.71□□□□□ -0.86
VPS8-227ENST00000625842 ZFP62Q8NB50 900 aaPredicted RBP9.71□□□□□ -0.86
VPS8-227ENST00000625842 ST6GALNAC3Q8NDV1 305 aa9.71□□□□□ -0.86
VPS8-227ENST00000625842 ZNF721Q8TF20 911 aa9.71□□□□□ -0.86
VPS8-227ENST00000625842 TIMP4Q99727 224 aa9.71□□□□□ -0.86
VPS8-227ENST00000625842 ARID1BQ8NFD5 2236 aaPredicted RBP9.7□□□□□ -0.86
VPS8-227ENST00000625842 FADS1O60427 444 aa9.7□□□□□ -0.86
VPS8-227ENST00000625842 MYOD1P15172 320 aa9.7□□□□□ -0.86
VPS8-227ENST00000625842 GP2P55259 537 aaKnown RBP9.7□□□□□ -0.86
VPS8-227ENST00000625842 ARF6P62330 175 aa9.7□□□□□ -0.86
VPS8-227ENST00000625842 RELBQ01201 579 aa9.7□□□□□ -0.86
VPS8-227ENST00000625842 LRRC75BQ2VPJ9 315 aa9.7□□□□□ -0.86
VPS8-227ENST00000625842 ACOT7LQ6ZUV0 252 aa9.7□□□□□ -0.86
VPS8-227ENST00000625842 SLC22A18ASQ8N1D0 253 aa9.7□□□□□ -0.86
VPS8-227ENST00000625842 SEC22AQ96IW7 307 aa9.7□□□□□ -0.86
VPS8-227ENST00000625842 ASCL3Q9NQ33 180 aa9.7□□□□□ -0.86
VPS8-227ENST00000625842 IL20Q9NYY1 176 aa9.7□□□□□ -0.86
VPS8-227ENST00000625842 TREM2Q9NZC2 230 aa9.7□□□□□ -0.86
VPS8-227ENST00000625842 NXPH3O95157 252 aa9.7□□□□□ -0.86
VPS8-227ENST00000625842 PEX11BO96011 259 aa9.7□□□□□ -0.86
VPS8-227ENST00000625842 ZNF90Q03938 601 aa9.7□□□□□ -0.86
VPS8-227ENST00000625842 PLPPR5Q32ZL2 321 aa9.7□□□□□ -0.86
VPS8-227ENST00000625842 FAM122CQ6P4D5 195 aa9.7□□□□□ -0.86
VPS8-227ENST00000625842 TMEM186Q96B77 213 aa9.7□□□□□ -0.86
VPS8-227ENST00000625842 SIGLEC12Q96PQ1 595 aa9.7□□□□□ -0.86
VPS8-227ENST00000625842 CCL13Q99616 98 aa9.7□□□□□ -0.86
VPS8-227ENST00000625842 IGHV3-43A0A0B4J1X8 118 aa9.7□□□□□ -0.86
VPS8-227ENST00000625842 A0A0B4J2A0 478 aa9.7□□□□□ -0.86
VPS8-227ENST00000625842 IGHV3-43DP0DP04 118 aa9.7□□□□□ -0.86
VPS8-227ENST00000625842 SLC25A4P12235 298 aa9.7□□□□□ -0.86
VPS8-227ENST00000625842 VDAC2P45880 294 aaPredicted RBP9.7□□□□□ -0.86
VPS8-227ENST00000625842 MMP15P51511 669 aa9.7□□□□□ -0.86
VPS8-227ENST00000625842 EXOSC2Q13868 293 aaKnown RBP9.7□□□□□ -0.86
VPS8-227ENST00000625842 CMPK2Q5EBM0 449 aa9.7□□□□□ -0.86
VPS8-227ENST00000625842 MRM1Q6IN84 353 aaKnown RBP9.7□□□□□ -0.86
VPS8-227ENST00000625842 SHPKQ9UHJ6 478 aa9.7□□□□□ -0.86
VPS8-227ENST00000625842 CCL27Q9Y4X3 112 aa9.7□□□□□ -0.86
VPS8-227ENST00000625842 TMEM56-RWDD3S4R434 201 aa9.7□□□□□ -0.86
VPS8-227ENST00000625842 RFPL4AA6NLU0 287 aa9.7□□□□□ -0.86
VPS8-227ENST00000625842 ZAR1LA6NP61 321 aa9.7□□□□□ -0.86
VPS8-227ENST00000625842 RFPL4AL1F8VTS6 287 aa9.7□□□□□ -0.86
VPS8-227ENST00000625842 UPK1BO75841 260 aa9.7□□□□□ -0.86
VPS8-227ENST00000625842 S100A11P31949 105 aa9.7□□□□□ -0.86
VPS8-227ENST00000625842 NHLH1Q02575 133 aa9.7□□□□□ -0.86
VPS8-227ENST00000625842 ZP4Q12836 540 aa9.7□□□□□ -0.86
VPS8-227ENST00000625842 ATG4DQ86TL0 474 aaPredicted RBP9.7□□□□□ -0.86
VPS8-227ENST00000625842 C9orf40Q8IXQ3 194 aa9.7□□□□□ -0.86
VPS8-227ENST00000625842 LSMEM1Q8N8F7 131 aa9.7□□□□□ -0.86
VPS8-227ENST00000625842 TUBB1Q9H4B7 451 aa9.7□□□□□ -0.86
VPS8-227ENST00000625842 ZNF275Q9NSD4 429 aaPredicted RBP9.7□□□□□ -0.86
VPS8-227ENST00000625842 SMLR1H3BR10 107 aa9.69□□□□□ -0.86
VPS8-227ENST00000625842 GYPAP02724 150 aa9.69□□□□□ -0.86
VPS8-227ENST00000625842 MPV17P39210 176 aa9.69□□□□□ -0.86
VPS8-227ENST00000625842 CCR6P51684 374 aa9.69□□□□□ -0.86
VPS8-227ENST00000625842 DLEU7Q6UYE1 221 aa9.69□□□□□ -0.86
VPS8-227ENST00000625842 C2orf50Q96LR7 162 aa9.69□□□□□ -0.86
VPS8-227ENST00000625842 KLK13Q9UKR3 277 aa9.69□□□□□ -0.86
VPS8-227ENST00000625842 RGPD2P0DJD1 1756 aa9.69□□□□□ -0.86
VPS8-227ENST00000625842 TRAV1-2A0A0B4J238 106 aa9.69□□□□□ -0.86
VPS8-227ENST00000625842 KIAA1324LA8MWY0 1029 aaPredicted RBP9.69□□□□□ -0.86
VPS8-227ENST00000625842 ORM2P19652 201 aa9.69□□□□□ -0.86
VPS8-227ENST00000625842 USF1P22415 310 aaPredicted RBP9.69□□□□□ -0.86
VPS8-227ENST00000625842 MFAP4P55083 255 aa9.69□□□□□ -0.86
VPS8-227ENST00000625842 LSM11P83369 360 aaKnown RBP eCLIP9.69□□□□□ -0.86
VPS8-227ENST00000625842 NSUN5P2Q63ZY6 315 aa9.69□□□□□ -0.86
VPS8-227ENST00000625842 FA2HQ7L5A8 372 aa9.69□□□□□ -0.86
VPS8-227ENST00000625842 DTX2Q86UW9 622 aa9.69□□□□□ -0.86
VPS8-227ENST00000625842 OR10A7Q8NGE5 316 aa9.69□□□□□ -0.86
VPS8-227ENST00000625842 NKX6-2Q9C056 277 aaPredicted RBP9.69□□□□□ -0.86
VPS8-227ENST00000625842 POFUT1Q9H488 388 aa9.69□□□□□ -0.86
VPS8-227ENST00000625842 RNF122Q9H9V4 155 aa9.69□□□□□ -0.86
VPS8-227ENST00000625842 AK3Q9UIJ7 227 aa9.69□□□□□ -0.86
VPS8-227ENST00000625842 PATE4P0C8F1 98 aa9.69□□□□□ -0.86
VPS8-227ENST00000625842 VSIG10L2P0DP72 767 aa9.69□□□□□ -0.86
VPS8-227ENST00000625842 CDCP2Q5VXM1 449 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms