RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 MCRIP1C9JLW8 97 aa8.95□□□□□ -0.98
VPS11-208ENST00000621676 MSTNO14793 375 aa8.95□□□□□ -0.98
VPS11-208ENST00000621676 LDLRAD4O15165 306 aa8.95□□□□□ -0.98
VPS11-208ENST00000621676 PSPNO60542 156 aa8.95□□□□□ -0.98
VPS11-208ENST00000621676 PRF1P14222 555 aa8.95□□□□□ -0.98
VPS11-208ENST00000621676 CD80P33681 288 aa8.95□□□□□ -0.98
VPS11-208ENST00000621676 CEACAM21Q3KPI0 293 aa8.95□□□□□ -0.98
VPS11-208ENST00000621676 LHFPL2Q6ZUX7 228 aa8.95□□□□□ -0.98
VPS11-208ENST00000621676 AQP3Q92482 292 aa8.95□□□□□ -0.98
VPS11-208ENST00000621676 OR1A1Q9P1Q5 309 aa8.95□□□□□ -0.98
VPS11-208ENST00000621676 PURGQ9UJV8 347 aaKnown RBP8.95□□□□□ -0.98
VPS11-208ENST00000621676 WASF3Q9UPY6 502 aa8.95□□□□□ -0.98
VPS11-208ENST00000621676 ZFHX3Q15911 3703 aa8.95□□□□□ -0.98
VPS11-208ENST00000621676 HSPB2A8KAH6 182 aa8.95□□□□□ -0.98
VPS11-208ENST00000621676 CTSSP25774 331 aa8.95□□□□□ -0.98
VPS11-208ENST00000621676 CCKARP32238 428 aa8.95□□□□□ -0.98
VPS11-208ENST00000621676 HSPB2Q16082 182 aa8.95□□□□□ -0.98
VPS11-208ENST00000621676 ABCA11PQ4W5N1 156 aa8.95□□□□□ -0.98
VPS11-208ENST00000621676 SEZ6L2Q6UXD5 910 aa8.95□□□□□ -0.98
VPS11-208ENST00000621676 BTNL3Q6UXE8 466 aa8.95□□□□□ -0.98
VPS11-208ENST00000621676 CDH24Q86UP0 819 aa8.95□□□□□ -0.98
VPS11-208ENST00000621676 NOXA1Q86UR1 476 aa8.95□□□□□ -0.98
VPS11-208ENST00000621676 STEAP2Q8NFT2 490 aa8.95□□□□□ -0.98
VPS11-208ENST00000621676 OR13G1Q8NGZ3 307 aa8.95□□□□□ -0.98
VPS11-208ENST00000621676 PLSCR4Q9NRQ2 329 aa8.95□□□□□ -0.98
VPS11-208ENST00000621676 NDUFB6O95139 128 aa8.94□□□□□ -0.98
VPS11-208ENST00000621676 PTBP3O95758 552 aaKnown RBP8.94□□□□□ -0.98
VPS11-208ENST00000621676 CD34P28906 385 aa8.94□□□□□ -0.98
VPS11-208ENST00000621676 SPINK9Q5DT21 86 aa8.94□□□□□ -0.98
VPS11-208ENST00000621676 UTF1Q5T230 341 aa8.94□□□□□ -0.98
VPS11-208ENST00000621676 FOXL2NBQ6ZUU3 175 aa8.94□□□□□ -0.98
VPS11-208ENST00000621676 SUMF2Q8NBJ7 301 aa8.94□□□□□ -0.98
VPS11-208ENST00000621676 TMEM185AQ8NFB2 350 aa8.94□□□□□ -0.98
VPS11-208ENST00000621676 Q96M66 194 aa8.94□□□□□ -0.98
VPS11-208ENST00000621676 GHITMQ9H3K2 345 aa8.94□□□□□ -0.98
VPS11-208ENST00000621676 DOPEY1Q5JWR5 2465 aa8.94□□□□□ -0.98
VPS11-208ENST00000621676 EIF3GO75821 320 aaKnown RBP eCLIP8.94□□□□□ -0.98
VPS11-208ENST00000621676 GNLYP22749 145 aa8.94□□□□□ -0.98
VPS11-208ENST00000621676 PTAFRP25105 342 aa8.94□□□□□ -0.98
VPS11-208ENST00000621676 SSTR5P35346 364 aa8.94□□□□□ -0.98
VPS11-208ENST00000621676 GLIPR1P48060 266 aa8.94□□□□□ -0.98
VPS11-208ENST00000621676 RBM39Q14498 530 aaKnown RBP8.94□□□□□ -0.98
VPS11-208ENST00000621676 Q6ZPA2 131 aa8.94□□□□□ -0.98
VPS11-208ENST00000621676 NLRC3Q7RTR2 1065 aa8.94□□□□□ -0.98
VPS11-208ENST00000621676 LYPD6Q86Y78 171 aa8.94□□□□□ -0.98
VPS11-208ENST00000621676 ANGPTL6Q8NI99 470 aa8.94□□□□□ -0.98
VPS11-208ENST00000621676 OR5P3Q8WZ94 311 aa8.94□□□□□ -0.98
VPS11-208ENST00000621676 SPSB1Q96BD6 273 aa8.94□□□□□ -0.98
VPS11-208ENST00000621676 ZNF486Q96H40 463 aaPredicted RBP8.94□□□□□ -0.98
VPS11-208ENST00000621676 MAGT1Q9H0U3 335 aa8.94□□□□□ -0.98
VPS11-208ENST00000621676 DPRXA6NFQ7 191 aa8.93□□□□□ -0.98
VPS11-208ENST00000621676 MFNGO00587 321 aa8.93□□□□□ -0.98
VPS11-208ENST00000621676 RBM11P57052 281 aaKnown RBP8.93□□□□□ -0.98
VPS11-208ENST00000621676 UNQ6126/PRO20091Q6UXV3 157 aa8.93□□□□□ -0.98
VPS11-208ENST00000621676 RNASE11Q8TAA1 199 aaKnown RBP8.93□□□□□ -0.98
VPS11-208ENST00000621676 THRSPQ92748 146 aa8.93□□□□□ -0.98
VPS11-208ENST00000621676 PIK3IP1Q96FE7 263 aa8.93□□□□□ -0.98
VPS11-208ENST00000621676 SUCNR1Q9BXA5 334 aa8.93□□□□□ -0.98
VPS11-208ENST00000621676 DYNLRB1Q9NP97 96 aa8.93□□□□□ -0.98
VPS11-208ENST00000621676 KIF25Q9UIL4 384 aa8.93□□□□□ -0.98
VPS11-208ENST00000621676 ERRFI1Q9UJM3 462 aaPredicted RBP8.93□□□□□ -0.98
VPS11-208ENST00000621676 RPL36A-HNRNPH2H7BZ11 118 aa8.93□□□□□ -0.98
VPS11-208ENST00000621676 SPDEFO95238 335 aa8.93□□□□□ -0.98
VPS11-208ENST00000621676 OR2H2O95918 312 aa8.93□□□□□ -0.98
VPS11-208ENST00000621676 OR4A8P0C604 315 aa8.93□□□□□ -0.98
VPS11-208ENST00000621676 EGR1P18146 543 aa8.93□□□□□ -0.98
VPS11-208ENST00000621676 FUT3P21217 361 aa8.93□□□□□ -0.98
VPS11-208ENST00000621676 CCL1P22362 96 aa8.93□□□□□ -0.98
VPS11-208ENST00000621676 IGFL3Q6UXB1 125 aa8.93□□□□□ -0.98
VPS11-208ENST00000621676 FBXW12Q6X9E4 464 aa8.93□□□□□ -0.98
VPS11-208ENST00000621676 SSX9Q7RTT3 188 aa8.93□□□□□ -0.98
VPS11-208ENST00000621676 MINDY2Q8NBR6 621 aa8.93□□□□□ -0.98
VPS11-208ENST00000621676 DEDD2Q8WXF8 326 aa8.93□□□□□ -0.98
VPS11-208ENST00000621676 MRGPRFQ96AM1 343 aa8.93□□□□□ -0.98
VPS11-208ENST00000621676 CCL13Q99616 98 aa8.93□□□□□ -0.98
VPS11-208ENST00000621676 ITGB1BP2Q9UKP3 347 aa8.93□□□□□ -0.98
VPS11-208ENST00000621676 SLC25A15Q9Y619 301 aa8.93□□□□□ -0.98
VPS11-208ENST00000621676 LOC390937A0A1W2PQ73 354 aa8.93□□□□□ -0.98
VPS11-208ENST00000621676 NDUFS7O75251 213 aa8.93□□□□□ -0.98
VPS11-208ENST00000621676 RBMXL2O75526 392 aaKnown RBP8.93□□□□□ -0.98
VPS11-208ENST00000621676 TUSC2O75896 110 aa8.93□□□□□ -0.98
VPS11-208ENST00000621676 GYPAP02724 150 aa8.93□□□□□ -0.98
VPS11-208ENST00000621676 CHRM2P08172 466 aa8.93□□□□□ -0.98
VPS11-208ENST00000621676 ANXA3P12429 323 aa8.93□□□□□ -0.98
VPS11-208ENST00000621676 CBR1P16152 277 aa8.93□□□□□ -0.98
VPS11-208ENST00000621676 NDUFB7P17568 137 aa8.93□□□□□ -0.98
VPS11-208ENST00000621676 CASP6P55212 293 aa8.93□□□□□ -0.98
VPS11-208ENST00000621676 PIGPP57054 158 aa8.93□□□□□ -0.98
VPS11-208ENST00000621676 LSM5Q9Y4Y9 91 aaKnown RBP8.93□□□□□ -0.98
VPS11-208ENST00000621676 A0A0A6YYH2 397 aa8.92□□□□□ -0.98
VPS11-208ENST00000621676 A6NJ64 397 aa8.92□□□□□ -0.98
VPS11-208ENST00000621676 H3BP45 60 aa8.92□□□□□ -0.98
VPS11-208ENST00000621676 TMPRSS2O15393 492 aa8.92□□□□□ -0.98
VPS11-208ENST00000621676 F12P00748 615 aaPredicted RBP8.92□□□□□ -0.98
VPS11-208ENST00000621676 CGAP01215 116 aa8.92□□□□□ -0.98
VPS11-208ENST00000621676 FCGR3AP08637 254 aa8.92□□□□□ -0.98
VPS11-208ENST00000621676 CD40P25942 277 aa8.92□□□□□ -0.98
VPS11-208ENST00000621676 OR3A1P47881 315 aa8.92□□□□□ -0.98
VPS11-208ENST00000621676 ZNF133P52736 654 aaPredicted RBP8.92□□□□□ -0.98
VPS11-208ENST00000621676 AVPI1Q5T686 147 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms