RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 SLC25A31Q9H0C2 315 aa16.91■□□□□ 0.3
PDLIM3-212ENST00000620787 MAGT1Q9H0U3 335 aa16.91■□□□□ 0.3
PDLIM3-212ENST00000620787 HS3ST3B1Q9Y662 390 aa16.91■□□□□ 0.3
PDLIM3-212ENST00000620787 TMEM56-RWDD3S4R434 201 aa16.91■□□□□ 0.3
PDLIM3-212ENST00000620787 HSPA12AO43301 675 aa16.9■□□□□ 0.3
PDLIM3-212ENST00000620787 VAMP5O95183 116 aa16.9■□□□□ 0.3
PDLIM3-212ENST00000620787 HSPB1P04792 205 aaKnown RBP16.9■□□□□ 0.3
PDLIM3-212ENST00000620787 GNRHRP30968 328 aa16.9■□□□□ 0.3
PDLIM3-212ENST00000620787 DYNLT3P51808 116 aa16.9■□□□□ 0.3
PDLIM3-212ENST00000620787 MALLQ13021 153 aa16.9■□□□□ 0.3
PDLIM3-212ENST00000620787 DAZAP2Q15038 168 aaPredicted RBP16.9■□□□□ 0.3
PDLIM3-212ENST00000620787 CXorf66Q5JRM2 361 aaPredicted RBP16.9■□□□□ 0.3
PDLIM3-212ENST00000620787 ZNF385CQ66K41 422 aaPredicted RBP16.9■□□□□ 0.3
PDLIM3-212ENST00000620787 TMEM211Q6ICI0 200 aa16.9■□□□□ 0.3
PDLIM3-212ENST00000620787 ZNF100Q8IYN0 542 aa16.9■□□□□ 0.3
PDLIM3-212ENST00000620787 SELENOHQ8IZQ5 122 aaKnown RBP16.9■□□□□ 0.3
PDLIM3-212ENST00000620787 ZNF383Q8NA42 475 aa16.9■□□□□ 0.3
PDLIM3-212ENST00000620787 SLC7A11Q9UPY5 501 aa16.9■□□□□ 0.3
PDLIM3-212ENST00000620787 URGCP-MRPS24S4R325 110 aa16.9■□□□□ 0.3
PDLIM3-212ENST00000620787 A0A087WZY1 265 aa16.89■□□□□ 0.3
PDLIM3-212ENST00000620787 TGIF2-C20orf24A0A0A6YYL0 155 aa16.89■□□□□ 0.3
PDLIM3-212ENST00000620787 HIST1H2BKO60814 126 aa16.89■□□□□ 0.3
PDLIM3-212ENST00000620787 LCATP04180 440 aa16.89■□□□□ 0.3
PDLIM3-212ENST00000620787 HIST1H2BJP06899 126 aa16.89■□□□□ 0.3
PDLIM3-212ENST00000620787 HIST1H2BOP23527 126 aa16.89■□□□□ 0.3
PDLIM3-212ENST00000620787 HIST1H2BBP33778 126 aa16.89■□□□□ 0.3
PDLIM3-212ENST00000620787 HIST1H2BDP58876 126 aa16.89■□□□□ 0.3
PDLIM3-212ENST00000620787 HIST1H2BCP62807 126 aa16.89■□□□□ 0.3
PDLIM3-212ENST00000620787 HIST2H2BEQ16778 126 aa16.89■□□□□ 0.3
PDLIM3-212ENST00000620787 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.89■□□□□ 0.3
PDLIM3-212ENST00000620787 TBC1D26Q86UD7 250 aa16.89■□□□□ 0.3
PDLIM3-212ENST00000620787 FAM185AQ8N0U4 392 aa16.89■□□□□ 0.3
PDLIM3-212ENST00000620787 HIST1H2BHQ93079 126 aa16.89■□□□□ 0.3
PDLIM3-212ENST00000620787 TVP23CQ96ET8 276 aa16.89■□□□□ 0.3
PDLIM3-212ENST00000620787 HIST1H2BNQ99877 126 aa16.89■□□□□ 0.3
PDLIM3-212ENST00000620787 HIST1H2BMQ99879 126 aa16.89■□□□□ 0.3
PDLIM3-212ENST00000620787 PTRH2Q9Y3E5 179 aaKnown RBP16.89■□□□□ 0.3
PDLIM3-212ENST00000620787 WSB1Q9Y6I7 421 aa16.89■□□□□ 0.3
PDLIM3-212ENST00000620787 CXorf65A6NEN9 183 aa16.89■□□□□ 0.29
PDLIM3-212ENST00000620787 TCN2P20062 427 aa16.89■□□□□ 0.29
PDLIM3-212ENST00000620787 HAAOP46952 286 aa16.89■□□□□ 0.29
PDLIM3-212ENST00000620787 LBX1P52954 281 aa16.89■□□□□ 0.29
PDLIM3-212ENST00000620787 RBM11P57052 281 aaKnown RBP16.89■□□□□ 0.29
PDLIM3-212ENST00000620787 RUNX1Q01196 453 aa16.89■□□□□ 0.29
PDLIM3-212ENST00000620787 OR1F12Q8NHA8 337 aa16.89■□□□□ 0.29
PDLIM3-212ENST00000620787 SPIN2AQ99865 258 aa16.89■□□□□ 0.29
PDLIM3-212ENST00000620787 SPIN2BQ9BPZ2 258 aa16.89■□□□□ 0.29
PDLIM3-212ENST00000620787 OPA3Q9H6K4 179 aa16.89■□□□□ 0.29
PDLIM3-212ENST00000620787 SIRT7Q9NRC8 400 aa16.89■□□□□ 0.29
PDLIM3-212ENST00000620787 PLSCR2Q9NRY7 297 aa16.89■□□□□ 0.29
PDLIM3-212ENST00000620787 UBE2J1Q9Y385 318 aaPredicted RBP16.89■□□□□ 0.29
PDLIM3-212ENST00000620787 TP53I11O14683 189 aa16.88■□□□□ 0.29
PDLIM3-212ENST00000620787 CST7O76096 145 aa16.88■□□□□ 0.29
PDLIM3-212ENST00000620787 TMEM50AO95807 157 aa16.88■□□□□ 0.29
PDLIM3-212ENST00000620787 DPPA2Q7Z7J5 298 aa16.88■□□□□ 0.29
PDLIM3-212ENST00000620787 ZNF695Q8IW36 515 aa16.88■□□□□ 0.29
PDLIM3-212ENST00000620787 CLDND2Q8NHS1 167 aa16.88■□□□□ 0.29
PDLIM3-212ENST00000620787 INTS12Q96CB8 462 aaKnown RBP16.88■□□□□ 0.29
PDLIM3-212ENST00000620787 ABHD14BQ96IU4 210 aa16.88■□□□□ 0.29
PDLIM3-212ENST00000620787 ADAM20O43506 726 aa16.88■□□□□ 0.29
PDLIM3-212ENST00000620787 GLIPR1P48060 266 aa16.88■□□□□ 0.29
PDLIM3-212ENST00000620787 RGS19P49795 217 aa16.88■□□□□ 0.29
PDLIM3-212ENST00000620787 VAMP2P63027 116 aa16.88■□□□□ 0.29
PDLIM3-212ENST00000620787 GNPNAT1Q96EK6 184 aaPredicted RBP16.88■□□□□ 0.29
PDLIM3-212ENST00000620787 ZNF442Q9H7R0 627 aa16.88■□□□□ 0.29
PDLIM3-212ENST00000620787 SLC7A10Q9NS82 523 aa16.88■□□□□ 0.29
PDLIM3-212ENST00000620787 RPL36A-HNRNPH2H7BZ11 118 aa16.87■□□□□ 0.29
PDLIM3-212ENST00000620787 ATXN7O15265 892 aaPredicted RBP16.87■□□□□ 0.29
PDLIM3-212ENST00000620787 CEACAM1P13688 526 aa16.87■□□□□ 0.29
PDLIM3-212ENST00000620787 RAET1LQ5VY80 246 aa16.87■□□□□ 0.29
PDLIM3-212ENST00000620787 GPR137CQ8N3F9 429 aa16.87■□□□□ 0.29
PDLIM3-212ENST00000620787 SIGLEC12Q96PQ1 595 aa16.87■□□□□ 0.29
PDLIM3-212ENST00000620787 NIPSNAP3BQ9BS92 247 aa16.87■□□□□ 0.29
PDLIM3-212ENST00000620787 P4HTMQ9NXG6 502 aa16.87■□□□□ 0.29
PDLIM3-212ENST00000620787 SEC14L6B5MCN3 397 aa16.87■□□□□ 0.29
PDLIM3-212ENST00000620787 FUT3P21217 361 aa16.87■□□□□ 0.29
PDLIM3-212ENST00000620787 GPX4P36969 197 aaPredicted RBP16.87■□□□□ 0.29
PDLIM3-212ENST00000620787 KRTAP27-1Q3LI81 207 aa16.87■□□□□ 0.29
PDLIM3-212ENST00000620787 C5orf24Q7Z6I8 188 aa16.87■□□□□ 0.29
PDLIM3-212ENST00000620787 SLC35E3Q7Z769 313 aa16.87■□□□□ 0.29
PDLIM3-212ENST00000620787 PLPPR1Q8TBJ4 325 aa16.87■□□□□ 0.29
PDLIM3-212ENST00000620787 hCG_38984A0A1B0GV85 526 aa16.86■□□□□ 0.29
PDLIM3-212ENST00000620787 CLEC18AA5D8T8 446 aa16.86■□□□□ 0.29
PDLIM3-212ENST00000620787 OR6C6A6NF89 314 aa16.86■□□□□ 0.29
PDLIM3-212ENST00000620787 TOX3O15405 576 aaPredicted RBP16.86■□□□□ 0.29
PDLIM3-212ENST00000620787 CYB5BO43169 146 aa16.86■□□□□ 0.29
PDLIM3-212ENST00000620787 CELA2AP08217 269 aa16.86■□□□□ 0.29
PDLIM3-212ENST00000620787 CST2P09228 141 aa16.86■□□□□ 0.29
PDLIM3-212ENST00000620787 FUT6P51993 359 aa16.86■□□□□ 0.29
PDLIM3-212ENST00000620787 NMSQ5H8A3 153 aa16.86■□□□□ 0.29
PDLIM3-212ENST00000620787 TMEM217Q8N7C4 229 aa16.86■□□□□ 0.29
PDLIM3-212ENST00000620787 CLEC18CQ8NCF0 446 aa16.86■□□□□ 0.29
PDLIM3-212ENST00000620787 OR10D4PQ8NGN7 298 aa16.86■□□□□ 0.29
PDLIM3-212ENST00000620787 RBMXL1Q96E39 390 aaKnown RBP16.86■□□□□ 0.29
PDLIM3-212ENST00000620787 GPHA2Q96T91 129 aa16.86■□□□□ 0.29
PDLIM3-212ENST00000620787 HIPK2Q9H2X6 1198 aa16.86■□□□□ 0.29
PDLIM3-212ENST00000620787 PRDM13Q9H4Q3 707 aa16.86■□□□□ 0.29
PDLIM3-212ENST00000620787 CALHM2Q9HA72 323 aa16.86■□□□□ 0.29
PDLIM3-212ENST00000620787 C19orf25Q9UFG5 118 aaPredicted RBP16.86■□□□□ 0.29
PDLIM3-212ENST00000620787 SDK1Q7Z5N4 2213 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms