RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, human

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-223	ENST00000616179	PHF3	Q92576	2039 aa	Known RBP	13.69	□□□□□ -0.22
SYNRG-223	ENST00000616179	CRYM-AS1	A6NIL9	109 aa		13.69	□□□□□ -0.22
SYNRG-223	ENST00000616179	LDLRAD4	O15165	306 aa		13.69	□□□□□ -0.22
SYNRG-223	ENST00000616179	CSRP1	P21291	193 aa	Known RBP	13.69	□□□□□ -0.22
SYNRG-223	ENST00000616179	PNRC1	Q12796	327 aa	Predicted RBP	13.69	□□□□□ -0.22
SYNRG-223	ENST00000616179	IZUMO4	Q1ZYL8	232 aa		13.69	□□□□□ -0.22
SYNRG-223	ENST00000616179	UBALD1	Q8TB05	177 aa		13.69	□□□□□ -0.22
SYNRG-223	ENST00000616179	CEP290	O15078	2479 aa		13.69	□□□□□ -0.22
SYNRG-223	ENST00000616179	BRCA2	P51587	3418 aa		13.69	□□□□□ -0.22
SYNRG-223	ENST00000616179	IGSF23	A1L1A6	192 aa		13.69	□□□□□ -0.22
SYNRG-223	ENST00000616179		B4DEV8	164 aa		13.69	□□□□□ -0.22
SYNRG-223	ENST00000616179	ZNF133	P52736	654 aa	Predicted RBP	13.69	□□□□□ -0.22
SYNRG-223	ENST00000616179	ST3GAL6	Q9Y274	331 aa		13.69	□□□□□ -0.22
SYNRG-223	ENST00000616179	PIAS3	Q9Y6X2	628 aa		13.69	□□□□□ -0.22
SYNRG-223	ENST00000616179	OR5R1	Q8NH85	324 aa		13.69	□□□□□ -0.22
SYNRG-223	ENST00000616179	GPBAR1	Q8TDU6	330 aa		13.69	□□□□□ -0.22
SYNRG-223	ENST00000616179	DNAJC5	Q9H3Z4	198 aa		13.69	□□□□□ -0.22
SYNRG-223	ENST00000616179	TGFBR3L	H3BV60	316 aa		13.68	□□□□□ -0.22
SYNRG-223	ENST00000616179	PLRG1	O43660	514 aa	Known RBP	13.68	□□□□□ -0.22
SYNRG-223	ENST00000616179	NTF3	P20783	257 aa		13.68	□□□□□ -0.22
SYNRG-223	ENST00000616179	MPZ	P25189	248 aa		13.68	□□□□□ -0.22
SYNRG-223	ENST00000616179	ERVFC1-1	P60608	527 aa		13.68	□□□□□ -0.22
SYNRG-223	ENST00000616179	TM4SF19	Q96DZ7	209 aa		13.68	□□□□□ -0.22
SYNRG-223	ENST00000616179	FOXJ2	Q9P0K8	574 aa		13.68	□□□□□ -0.22
SYNRG-223	ENST00000616179	LTBP4	Q8N2S1	1624 aa		13.68	□□□□□ -0.22
SYNRG-223	ENST00000616179	SHANK1	Q9Y566	2161 aa		13.68	□□□□□ -0.22
SYNRG-223	ENST00000616179	DOCK11	Q5JSL3	2073 aa		13.68	□□□□□ -0.22
SYNRG-223	ENST00000616179	GRIFIN	A4D1Z8	144 aa		13.68	□□□□□ -0.22
SYNRG-223	ENST00000616179	OR6C6	A6NF89	314 aa		13.68	□□□□□ -0.22
SYNRG-223	ENST00000616179	VAMP3	Q15836	100 aa		13.68	□□□□□ -0.22
SYNRG-223	ENST00000616179	PLCXD3	Q63HM9	321 aa		13.68	□□□□□ -0.22
SYNRG-223	ENST00000616179	UBE2L5P	A0A1B0GUS4	154 aa		13.68	□□□□□ -0.22
SYNRG-223	ENST00000616179		K7N7A8	449 aa		13.68	□□□□□ -0.22
SYNRG-223	ENST00000616179	SMIM10L1	P0DMW3	83 aa		13.68	□□□□□ -0.22
SYNRG-223	ENST00000616179	BCL2	P10415	239 aa		13.68	□□□□□ -0.22
SYNRG-223	ENST00000616179	CD82	P27701	267 aa		13.68	□□□□□ -0.22
SYNRG-223	ENST00000616179	DEGS2	Q6QHC5	323 aa		13.68	□□□□□ -0.22
SYNRG-223	ENST00000616179	SMIM10	Q96HG1	83 aa		13.68	□□□□□ -0.22
SYNRG-223	ENST00000616179	CHD3	Q12873	2000 aa	Known RBP	13.68	□□□□□ -0.22
SYNRG-223	ENST00000616179	MARCH11	A6NNE9	402 aa		13.67	□□□□□ -0.22
SYNRG-223	ENST00000616179	NPIPA2	E9PIF3	369 aa		13.67	□□□□□ -0.22
SYNRG-223	ENST00000616179	NPIPA3	F8WFD2	350 aa		13.67	□□□□□ -0.22
SYNRG-223	ENST00000616179	IFNL4	K9M1U5	179 aa		13.67	□□□□□ -0.22
SYNRG-223	ENST00000616179	CELA2B	P08218	269 aa	Predicted RBP	13.67	□□□□□ -0.22
SYNRG-223	ENST00000616179	HNRNPA2B1	P22626	353 aa	Known RBP	13.67	□□□□□ -0.22
SYNRG-223	ENST00000616179	OR10J1	P30954	320 aa		13.67	□□□□□ -0.22
SYNRG-223	ENST00000616179	HSD17B7	P56937	341 aa		13.67	□□□□□ -0.22
SYNRG-223	ENST00000616179	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	13.67	□□□□□ -0.22
SYNRG-223	ENST00000616179	WDR5B	Q86VZ2	330 aa		13.67	□□□□□ -0.22
SYNRG-223	ENST00000616179	OR56B2P	Q8NGI1	322 aa		13.67	□□□□□ -0.22
SYNRG-223	ENST00000616179	DLEU1	O43261	78 aa		13.67	□□□□□ -0.22
SYNRG-223	ENST00000616179	CD55	P08174	381 aa		13.67	□□□□□ -0.22
SYNRG-223	ENST00000616179	BAX	Q07812	192 aa		13.67	□□□□□ -0.22
SYNRG-223	ENST00000616179	ACOT6	Q3I5F7	207 aa	Predicted RBP	13.67	□□□□□ -0.22
SYNRG-223	ENST00000616179	RTN4R	Q9BZR6	473 aa		13.67	□□□□□ -0.22
SYNRG-223	ENST00000616179	SMDT1	Q9H4I9	107 aa		13.67	□□□□□ -0.22
SYNRG-223	ENST00000616179	DNAJC4	Q9NNZ3	241 aa		13.67	□□□□□ -0.22
SYNRG-223	ENST00000616179		A0A1B0GWJ7	208 aa		13.67	□□□□□ -0.22
SYNRG-223	ENST00000616179	TNFRSF10C	O14798	259 aa		13.67	□□□□□ -0.22
SYNRG-223	ENST00000616179	THBS4	P35443	961 aa		13.67	□□□□□ -0.22
SYNRG-223	ENST00000616179	TGFBR3	Q03167	851 aa		13.67	□□□□□ -0.22
SYNRG-223	ENST00000616179	LMX1A	Q8TE12	382 aa		13.67	□□□□□ -0.22
SYNRG-223	ENST00000616179	BMF	Q96LC9	184 aa		13.67	□□□□□ -0.22
SYNRG-223	ENST00000616179	LAMA2	P24043	3122 aa	Known RBP	13.67	□□□□□ -0.22
SYNRG-223	ENST00000616179	ISG15	P05161	165 aa		13.66	□□□□□ -0.22
SYNRG-223	ENST00000616179	CMTM2	Q8TAZ6	248 aa		13.66	□□□□□ -0.22
SYNRG-223	ENST00000616179	FAM206A	Q9NX38	181 aa		13.66	□□□□□ -0.22
SYNRG-223	ENST00000616179	HPRT1	P00492	218 aa		13.66	□□□□□ -0.22
SYNRG-223	ENST00000616179	CCKAR	P32238	428 aa		13.66	□□□□□ -0.22
SYNRG-223	ENST00000616179	CNN1	P51911	297 aa	Known RBP	13.66	□□□□□ -0.22
SYNRG-223	ENST00000616179	SRPX	P78539	464 aa		13.66	□□□□□ -0.22
SYNRG-223	ENST00000616179	HTD2	P86397	168 aa		13.66	□□□□□ -0.22
SYNRG-223	ENST00000616179	PIGY	Q3MUY2	71 aa		13.66	□□□□□ -0.22
SYNRG-223	ENST00000616179	NAT8	Q9UHE5	227 aa		13.66	□□□□□ -0.22
SYNRG-223	ENST00000616179	MTCL1	Q9Y4B5	1905 aa	Known RBP	13.66	□□□□□ -0.22
SYNRG-223	ENST00000616179	TDRD6	O60522	2096 aa	Known RBP	13.66	□□□□□ -0.22
SYNRG-223	ENST00000616179	CEACAM1	P13688	526 aa		13.66	□□□□□ -0.22
SYNRG-223	ENST00000616179	TNFSF10	P50591	281 aa		13.66	□□□□□ -0.22
SYNRG-223	ENST00000616179	SUCLG1	P53597	346 aa	Known RBP	13.66	□□□□□ -0.22
SYNRG-223	ENST00000616179	MYBPH	Q13203	477 aa		13.66	□□□□□ -0.22
SYNRG-223	ENST00000616179	TBC1D26	Q86UD7	250 aa		13.66	□□□□□ -0.22
SYNRG-223	ENST00000616179	OR1K1	Q8NGR3	316 aa		13.66	□□□□□ -0.22
SYNRG-223	ENST00000616179	SPTSSA	Q969W0	71 aa		13.66	□□□□□ -0.22
SYNRG-223	ENST00000616179	BOD1	Q96IK1	185 aa		13.66	□□□□□ -0.22
SYNRG-223	ENST00000616179		Q9N2K0	584 aa		13.66	□□□□□ -0.22
SYNRG-223	ENST00000616179	PLXNB3	Q9ULL4	1909 aa		13.65	□□□□□ -0.22
SYNRG-223	ENST00000616179	PMCH	P20382	165 aa		13.65	□□□□□ -0.22
SYNRG-223	ENST00000616179	NTSR1	P30989	418 aa		13.65	□□□□□ -0.22
SYNRG-223	ENST00000616179	HBG1	P69891	147 aa		13.65	□□□□□ -0.22
SYNRG-223	ENST00000616179	HBG2	P69892	147 aa		13.65	□□□□□ -0.22
SYNRG-223	ENST00000616179	OR4C5	Q8NGB2	326 aa		13.65	□□□□□ -0.22
SYNRG-223	ENST00000616179	CIB3	Q96Q77	187 aa	Predicted RBP	13.65	□□□□□ -0.22
SYNRG-223	ENST00000616179	RPRM	Q9NS64	109 aa		13.65	□□□□□ -0.22
SYNRG-223	ENST00000616179	SEMA5B	Q9P283	1151 aa		13.65	□□□□□ -0.22
SYNRG-223	ENST00000616179	MDFIC2	A0A1B0GVS7	189 aa		13.65	□□□□□ -0.22
SYNRG-223	ENST00000616179	FAM157A	C9JC47	383 aa		13.65	□□□□□ -0.22
SYNRG-223	ENST00000616179	MPPED1	O15442	326 aa		13.65	□□□□□ -0.22
SYNRG-223	ENST00000616179	EGR1	P18146	543 aa		13.65	□□□□□ -0.22
SYNRG-223	ENST00000616179	FBL	P22087	321 aa	Known RBP	13.65	□□□□□ -0.22
SYNRG-223	ENST00000616179	UCP3	P55916	312 aa		13.65	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms