RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 NUDT16L1Q9BRJ7 211 aaKnown RBP12.24□□□□□ -0.45
CD48-203ENST00000613788 DPCDQ9BVM2 203 aaPredicted RBP12.24□□□□□ -0.45
CD48-203ENST00000613788 REG4Q9BYZ8 158 aa12.24□□□□□ -0.45
CD48-203ENST00000613788 RCC2Q9P258 522 aaKnown RBP12.24□□□□□ -0.45
CD48-203ENST00000613788 CTSZQ9UBR2 303 aa12.24□□□□□ -0.45
CD48-203ENST00000613788 SLC25A10Q9UBX3 287 aaPredicted RBP12.24□□□□□ -0.45
CD48-203ENST00000613788 TMEM82A0PJX8 343 aa12.23□□□□□ -0.45
CD48-203ENST00000613788 DVL1O14640 695 aa12.23□□□□□ -0.45
CD48-203ENST00000613788 GPR37O15354 613 aa12.23□□□□□ -0.45
CD48-203ENST00000613788 PSPNO60542 156 aa12.23□□□□□ -0.45
CD48-203ENST00000613788 EIF4EP06730 217 aaKnown RBP12.23□□□□□ -0.45
CD48-203ENST00000613788 ELK1P19419 428 aa12.23□□□□□ -0.45
CD48-203ENST00000613788 CHATP28329 748 aa12.23□□□□□ -0.45
CD48-203ENST00000613788 TALDO1P37837 337 aa12.23□□□□□ -0.45
CD48-203ENST00000613788 KCNJ3P48549 501 aa12.23□□□□□ -0.45
CD48-203ENST00000613788 TMEM50BP56557 158 aa12.23□□□□□ -0.45
CD48-203ENST00000613788 GRK1Q15835 563 aa12.23□□□□□ -0.45
CD48-203ENST00000613788 ESCO2Q56NI9 601 aa12.23□□□□□ -0.45
CD48-203ENST00000613788 NKAPLQ5M9Q1 402 aa12.23□□□□□ -0.45
CD48-203ENST00000613788 C17orf107Q6ZR85 190 aa12.23□□□□□ -0.45
CD48-203ENST00000613788 OR8H2Q8N162 312 aa12.23□□□□□ -0.45
CD48-203ENST00000613788 WFDC11Q8NEX6 87 aa12.23□□□□□ -0.45
CD48-203ENST00000613788 NEK7Q8TDX7 302 aa12.23□□□□□ -0.45
CD48-203ENST00000613788 SHARPINQ9H0F6 387 aa12.23□□□□□ -0.45
CD48-203ENST00000613788 PTTG2Q9NZH5 202 aa12.23□□□□□ -0.45
CD48-203ENST00000613788 ZNF581Q9P0T4 197 aa12.23□□□□□ -0.45
CD48-203ENST00000613788 CLN8Q9UBY8 286 aa12.23□□□□□ -0.45
CD48-203ENST00000613788 A0A1B0GW55 424 aa12.22□□□□□ -0.45
CD48-203ENST00000613788 FUOMA2VDF0 154 aa12.22□□□□□ -0.45
CD48-203ENST00000613788 FOXI3A8MTJ6 420 aaPredicted RBP12.22□□□□□ -0.45
CD48-203ENST00000613788 RNF223E7ERA6 249 aa12.22□□□□□ -0.45
CD48-203ENST00000613788 HSPB6O14558 160 aa12.22□□□□□ -0.45
CD48-203ENST00000613788 MGST3O14880 152 aa12.22□□□□□ -0.45
CD48-203ENST00000613788 XRCC3O43542 346 aa12.22□□□□□ -0.45
CD48-203ENST00000613788 FLNBO75369 2602 aaKnown RBP12.22□□□□□ -0.45
CD48-203ENST00000613788 CLPXO76031 633 aa12.22□□□□□ -0.45
CD48-203ENST00000613788 CSN2P05814 226 aa12.22□□□□□ -0.45
CD48-203ENST00000613788 DUX4L2P0CJ85 424 aa12.22□□□□□ -0.45
CD48-203ENST00000613788 DUX4L3P0CJ86 424 aa12.22□□□□□ -0.45
CD48-203ENST00000613788 DUX4L4P0CJ87 422 aa12.22□□□□□ -0.45
CD48-203ENST00000613788 DUX4L5P0CJ88 424 aa12.22□□□□□ -0.45
CD48-203ENST00000613788 DUX4L6P0CJ89 424 aa12.22□□□□□ -0.45
CD48-203ENST00000613788 DUX4L7P0CJ90 424 aa12.22□□□□□ -0.45
CD48-203ENST00000613788 CDK2P24941 298 aa12.22□□□□□ -0.45
CD48-203ENST00000613788 GNB2P62879 340 aa12.22□□□□□ -0.45
CD48-203ENST00000613788 LOXL1Q08397 574 aaPredicted RBP12.22□□□□□ -0.45
CD48-203ENST00000613788 MOGAT2Q3SYC2 334 aa12.22□□□□□ -0.45
CD48-203ENST00000613788 BRICD5Q6PL45 260 aa12.22□□□□□ -0.45
CD48-203ENST00000613788 DUX4L9Q6RFH8 374 aaPredicted RBP12.22□□□□□ -0.45
CD48-203ENST00000613788 ZNF841Q6ZN19 808 aa12.22□□□□□ -0.45
CD48-203ENST00000613788 GDPD3Q7L5L3 318 aa12.22□□□□□ -0.45
CD48-203ENST00000613788 C6orf201Q7Z4U5 140 aa12.22□□□□□ -0.45
CD48-203ENST00000613788 LAX1Q8IWV1 398 aa12.22□□□□□ -0.45
CD48-203ENST00000613788 OR4S1Q8NGB4 309 aa12.22□□□□□ -0.45
CD48-203ENST00000613788 ARHGAP5-AS1Q96IT6 56 aa12.22□□□□□ -0.45
CD48-203ENST00000613788 PECRQ9BY49 303 aa12.22□□□□□ -0.45
CD48-203ENST00000613788 CHST6Q9GZX3 395 aa12.22□□□□□ -0.45
CD48-203ENST00000613788 PPA2Q9H2U2 334 aa12.22□□□□□ -0.45
CD48-203ENST00000613788 MIXL1Q9H2W2 232 aa12.22□□□□□ -0.45
CD48-203ENST00000613788 DUX4Q9UBX2 424 aa12.22□□□□□ -0.45
CD48-203ENST00000613788 TRAV18A0A075B6X5 111 aa12.21□□□□□ -0.45
CD48-203ENST00000613788 SELLP14151 372 aa12.21□□□□□ -0.45
CD48-203ENST00000613788 NDUFB7P17568 137 aa12.21□□□□□ -0.45
CD48-203ENST00000613788 OR3A1P47881 315 aa12.21□□□□□ -0.45
CD48-203ENST00000613788 C11orf91Q3C1V1 193 aa12.21□□□□□ -0.45
CD48-203ENST00000613788 CDNFQ49AH0 187 aa12.21□□□□□ -0.45
CD48-203ENST00000613788 PLAC9Q5JTB6 97 aa12.21□□□□□ -0.45
CD48-203ENST00000613788 TMEM69Q5SWH9 247 aa12.21□□□□□ -0.45
CD48-203ENST00000613788 WDR25Q64LD2 544 aaPredicted RBP12.21□□□□□ -0.45
CD48-203ENST00000613788 BPIFB2Q8N4F0 458 aa12.21□□□□□ -0.45
CD48-203ENST00000613788 ST8SIA4Q92187 359 aa12.21□□□□□ -0.45
CD48-203ENST00000613788 FAAP24Q9BTP7 215 aa12.21□□□□□ -0.45
CD48-203ENST00000613788 SSBP3Q9BWW4 388 aaPredicted RBP12.21□□□□□ -0.45
CD48-203ENST00000613788 UBE2QL1A1L167 161 aa12.21□□□□□ -0.46
CD48-203ENST00000613788 SERPINE3A8MV23 424 aa12.21□□□□□ -0.46
CD48-203ENST00000613788 CA11O75493 328 aa12.21□□□□□ -0.46
CD48-203ENST00000613788 GSTP1P09211 210 aaKnown RBP12.21□□□□□ -0.46
CD48-203ENST00000613788 HIST1H1DP16402 221 aaKnown RBP12.21□□□□□ -0.46
CD48-203ENST00000613788 TNFSF8P32971 234 aa12.21□□□□□ -0.46
CD48-203ENST00000613788 MNDAP41218 407 aa12.21□□□□□ -0.46
CD48-203ENST00000613788 CD276Q5ZPR3 534 aa12.21□□□□□ -0.46
CD48-203ENST00000613788 DIRAS2Q96HU8 199 aa12.21□□□□□ -0.46
CD48-203ENST00000613788 WDFY2Q96P53 400 aa12.21□□□□□ -0.46
CD48-203ENST00000613788 SULT4A1Q9BR01 284 aa12.21□□□□□ -0.46
CD48-203ENST00000613788 ETAA1Q9NY74 926 aa12.21□□□□□ -0.46
CD48-203ENST00000613788 EXTL2Q9UBQ6 330 aa12.21□□□□□ -0.46
CD48-203ENST00000613788 A0A096LNT2 108 aa12.2□□□□□ -0.46
CD48-203ENST00000613788 H7C1Q1 480 aa12.2□□□□□ -0.46
CD48-203ENST00000613788 FOXH1O75593 365 aa12.2□□□□□ -0.46
CD48-203ENST00000613788 TPPPO94811 219 aa12.2□□□□□ -0.46
CD48-203ENST00000613788 ECDO95905 644 aaPredicted RBP12.2□□□□□ -0.46
CD48-203ENST00000613788 GNB3P16520 340 aa12.2□□□□□ -0.46
CD48-203ENST00000613788 ERP29P30040 261 aaKnown RBP12.2□□□□□ -0.46
CD48-203ENST00000613788 EDDM3BP56851 147 aa12.2□□□□□ -0.46
CD48-203ENST00000613788 SEC61A1P61619 476 aaKnown RBP12.2□□□□□ -0.46
CD48-203ENST00000613788 MRPS15P82914 257 aaKnown RBP12.2□□□□□ -0.46
CD48-203ENST00000613788 EDDM3AQ14507 147 aa12.2□□□□□ -0.46
CD48-203ENST00000613788 ATXN7L3Q14CW9 347 aaPredicted RBP12.2□□□□□ -0.46
CD48-203ENST00000613788 KRBOX4Q5JUW0 171 aa12.2□□□□□ -0.46
CD48-203ENST00000613788 SLC35E4Q6ICL7 350 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms