RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 ETAA1Q9NY74 926 aa18.22■□□□□ 0.51
USP6NL-204ENST00000606752 IL19Q9UHD0 177 aa18.22■□□□□ 0.51
USP6NL-204ENST00000606752 GLS2Q9UI32 602 aa18.22■□□□□ 0.51
USP6NL-204ENST00000606752 SDCBPO00560 298 aaPredicted RBP18.21■□□□□ 0.51
USP6NL-204ENST00000606752 VSIG10L2P0DP72 767 aa18.21■□□□□ 0.51
USP6NL-204ENST00000606752 UQCRFS1P47985 274 aa18.21■□□□□ 0.51
USP6NL-204ENST00000606752 TFF3Q07654 80 aa18.21■□□□□ 0.51
USP6NL-204ENST00000606752 ATPAF1Q5TC12 328 aaPredicted RBP18.21■□□□□ 0.51
USP6NL-204ENST00000606752 ZDHHC22Q8N966 263 aa18.21■□□□□ 0.51
USP6NL-204ENST00000606752 LRRC29Q8WV35 223 aa18.21■□□□□ 0.51
USP6NL-204ENST00000606752 ITLN1Q8WWA0 313 aa18.21■□□□□ 0.51
USP6NL-204ENST00000606752 ST6GAL2Q96JF0 529 aa18.21■□□□□ 0.51
USP6NL-204ENST00000606752 FN3KRPQ9HA64 309 aa18.21■□□□□ 0.51
USP6NL-204ENST00000606752 RASL12Q9NYN1 266 aa18.21■□□□□ 0.51
USP6NL-204ENST00000606752 ICE1Q9Y2F5 2266 aa18.21■□□□□ 0.51
USP6NL-204ENST00000606752 TNFSF4P23510 183 aa18.21■□□□□ 0.51
USP6NL-204ENST00000606752 GATA4P43694 442 aa18.21■□□□□ 0.51
USP6NL-204ENST00000606752 TNFAIP6P98066 277 aaPredicted RBP18.21■□□□□ 0.51
USP6NL-204ENST00000606752 TLE1Q04724 770 aa18.21■□□□□ 0.51
USP6NL-204ENST00000606752 C11orf91Q3C1V1 193 aa18.21■□□□□ 0.51
USP6NL-204ENST00000606752 BEX5Q5H9J7 111 aa18.21■□□□□ 0.51
USP6NL-204ENST00000606752 Q6ZPA2 131 aa18.21■□□□□ 0.51
USP6NL-204ENST00000606752 Q6ZS49 121 aa18.21■□□□□ 0.51
USP6NL-204ENST00000606752 CCDC107Q8WV48 283 aa18.21■□□□□ 0.51
USP6NL-204ENST00000606752 SEC22CQ9BRL7 303 aa18.21■□□□□ 0.51
USP6NL-204ENST00000606752 MYOZ1Q9NP98 299 aaPredicted RBP18.21■□□□□ 0.51
USP6NL-204ENST00000606752 CACNA1BQ00975 2339 aa18.2■□□□□ 0.5
USP6NL-204ENST00000606752 SNRPGP15A8MWD9 76 aa18.2■□□□□ 0.5
USP6NL-204ENST00000606752 SLC33A1O00400 549 aaPredicted RBP18.2■□□□□ 0.5
USP6NL-204ENST00000606752 HAND1O96004 215 aa18.2■□□□□ 0.5
USP6NL-204ENST00000606752 SERPINF1P36955 418 aa18.2■□□□□ 0.5
USP6NL-204ENST00000606752 SPRNQ5BIV9 151 aa18.2■□□□□ 0.5
USP6NL-204ENST00000606752 CD276Q5ZPR3 534 aa18.2■□□□□ 0.5
USP6NL-204ENST00000606752 DIRC2Q96SL1 478 aa18.2■□□□□ 0.5
USP6NL-204ENST00000606752 Q9N2K0 584 aa18.2■□□□□ 0.5
USP6NL-204ENST00000606752 NECAP2Q9NVZ3 263 aa18.2■□□□□ 0.5
USP6NL-204ENST00000606752 TREM2Q9NZC2 230 aa18.2■□□□□ 0.5
USP6NL-204ENST00000606752 VSIG4Q9Y279 399 aa18.2■□□□□ 0.5
USP6NL-204ENST00000606752 KALRNO60229 2985 aa18.2■□□□□ 0.5
USP6NL-204ENST00000606752 E7EQL1 145 aa18.19■□□□□ 0.5
USP6NL-204ENST00000606752 SIRPB1O00241 398 aa18.19■□□□□ 0.5
USP6NL-204ENST00000606752 KNG1P01042 644 aa18.19■□□□□ 0.5
USP6NL-204ENST00000606752 ADH4P08319 380 aa18.19■□□□□ 0.5
USP6NL-204ENST00000606752 LMO1P25800 156 aa18.19■□□□□ 0.5
USP6NL-204ENST00000606752 SMIM21Q3B7S5 101 aa18.19■□□□□ 0.5
USP6NL-204ENST00000606752 PAN3Q58A45 887 aaKnown RBP18.19■□□□□ 0.5
USP6NL-204ENST00000606752 TMED4Q7Z7H5 227 aa18.19■□□□□ 0.5
USP6NL-204ENST00000606752 MOGAT3Q86VF5 341 aa18.19■□□□□ 0.5
USP6NL-204ENST00000606752 LHFPL1Q86WI0 220 aa18.19■□□□□ 0.5
USP6NL-204ENST00000606752 OR14J1Q9UGF5 321 aa18.19■□□□□ 0.5
USP6NL-204ENST00000606752 TRBV6-6A0A0A6YYG2 114 aa18.19■□□□□ 0.5
USP6NL-204ENST00000606752 CEACAM18A8MTB9 384 aa18.19■□□□□ 0.5
USP6NL-204ENST00000606752 CREBL2O60519 120 aaPredicted RBP18.19■□□□□ 0.5
USP6NL-204ENST00000606752 OR5H8P0DN80 308 aa18.19■□□□□ 0.5
USP6NL-204ENST00000606752 AGAP20933 346 aa18.19■□□□□ 0.5
USP6NL-204ENST00000606752 MDH2P40926 338 aaKnown RBP18.19■□□□□ 0.5
USP6NL-204ENST00000606752 FCN2Q15485 313 aa18.19■□□□□ 0.5
USP6NL-204ENST00000606752 SHEQ5VZ18 495 aa18.19■□□□□ 0.5
USP6NL-204ENST00000606752 ZNF626Q68DY1 528 aa18.19■□□□□ 0.5
USP6NL-204ENST00000606752 ZNF808Q8N4W9 903 aaPredicted RBP18.19■□□□□ 0.5
USP6NL-204ENST00000606752 CNTNAP3BQ96NU0 1288 aa18.19■□□□□ 0.5
USP6NL-204ENST00000606752 CNTNAP3Q9BZ76 1288 aa18.19■□□□□ 0.5
USP6NL-204ENST00000606752 ZNF221Q9UK13 617 aa18.19■□□□□ 0.5
USP6NL-204ENST00000606752 RELNP78509 3460 aa18.18■□□□□ 0.5
USP6NL-204ENST00000606752 A8MV72 311 aaPredicted RBP18.18■□□□□ 0.5
USP6NL-204ENST00000606752 SRRM5B3KS81 715 aa18.18■□□□□ 0.5
USP6NL-204ENST00000606752 SSNA1O43805 119 aa18.18■□□□□ 0.5
USP6NL-204ENST00000606752 HOXA4Q00056 320 aaPredicted RBP18.18■□□□□ 0.5
USP6NL-204ENST00000606752 MARCH1Q8TCQ1 289 aa18.18■□□□□ 0.5
USP6NL-204ENST00000606752 ERGIC1Q969X5 290 aa18.18■□□□□ 0.5
USP6NL-204ENST00000606752 TMEM165Q9HC07 324 aa18.18■□□□□ 0.5
USP6NL-204ENST00000606752 RNF115Q9Y4L5 304 aa18.18■□□□□ 0.5
USP6NL-204ENST00000606752 POM121CA8CG34 1229 aa18.17■□□□□ 0.5
USP6NL-204ENST00000606752 C17orf100A8MU93 164 aa18.17■□□□□ 0.5
USP6NL-204ENST00000606752 APOBEC3AP31941 199 aaPredicted RBP18.17■□□□□ 0.5
USP6NL-204ENST00000606752 CD83Q01151 205 aa18.17■□□□□ 0.5
USP6NL-204ENST00000606752 AADACL3Q5VUY0 350 aa18.17■□□□□ 0.5
USP6NL-204ENST00000606752 DHRS11Q6UWP2 260 aa18.17■□□□□ 0.5
USP6NL-204ENST00000606752 FAM90A1Q86YD7 464 aa18.17■□□□□ 0.5
USP6NL-204ENST00000606752 MRPL30Q8TCC3 161 aaKnown RBP18.17■□□□□ 0.5
USP6NL-204ENST00000606752 CAPSLQ8WWF8 208 aa18.17■□□□□ 0.5
USP6NL-204ENST00000606752 NEUROG1Q92886 237 aa18.17■□□□□ 0.5
USP6NL-204ENST00000606752 SCGB3A2Q96PL1 93 aa18.17■□□□□ 0.5
USP6NL-204ENST00000606752 ING3Q9NXR8 418 aa18.17■□□□□ 0.5
USP6NL-204ENST00000606752 ZNF69Q9UC07 566 aa18.17■□□□□ 0.5
USP6NL-204ENST00000606752 HIVEP3Q5T1R4 2406 aa18.17■□□□□ 0.5
USP6NL-204ENST00000606752 RFPL4AA6NLU0 287 aa18.16■□□□□ 0.5
USP6NL-204ENST00000606752 RFPL4AL1F8VTS6 287 aa18.16■□□□□ 0.5
USP6NL-204ENST00000606752 H7C1Q1 480 aa18.16■□□□□ 0.5
USP6NL-204ENST00000606752 IFNL4K9M1U5 179 aa18.16■□□□□ 0.5
USP6NL-204ENST00000606752 ZG16O60844 167 aa18.16■□□□□ 0.5
USP6NL-204ENST00000606752 CLDN14O95500 239 aa18.16■□□□□ 0.5
USP6NL-204ENST00000606752 LHBP01229 141 aa18.16■□□□□ 0.5
USP6NL-204ENST00000606752 OR4E1P0C645 316 aa18.16■□□□□ 0.5
USP6NL-204ENST00000606752 GSTT2P0CG29 244 aa18.16■□□□□ 0.5
USP6NL-204ENST00000606752 NPY4RP50391 375 aa18.16■□□□□ 0.5
USP6NL-204ENST00000606752 C4orf46Q504U0 113 aa18.16■□□□□ 0.5
USP6NL-204ENST00000606752 SLC25A42Q86VD7 318 aa18.16■□□□□ 0.5
USP6NL-204ENST00000606752 GCSAMQ8N6F7 178 aa18.16■□□□□ 0.5
USP6NL-204ENST00000606752 RANGRFQ9HD47 186 aaPredicted RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms