RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 FAM185AQ8N0U4 392 aa11.77□□□□□ -0.53
CTSA-211ENST00000606066 KIR3DL3Q8N743 410 aa11.77□□□□□ -0.53
CTSA-211ENST00000606066 UPRTQ96BW1 309 aa11.77□□□□□ -0.53
CTSA-211ENST00000606066 KCTD7Q96MP8 289 aa11.77□□□□□ -0.53
CTSA-211ENST00000606066 WDFY2Q96P53 400 aa11.77□□□□□ -0.53
CTSA-211ENST00000606066 CHCHD6Q9BRQ6 235 aa11.77□□□□□ -0.53
CTSA-211ENST00000606066 MRPS26Q9BYN8 205 aaKnown RBP11.77□□□□□ -0.53
CTSA-211ENST00000606066 CHST6Q9GZX3 395 aa11.77□□□□□ -0.53
CTSA-211ENST00000606066 OR51E2Q9H255 320 aa11.77□□□□□ -0.53
CTSA-211ENST00000606066 IFT22Q9H7X7 185 aa11.77□□□□□ -0.53
CTSA-211ENST00000606066 SPACA1Q9HBV2 294 aa11.77□□□□□ -0.53
CTSA-211ENST00000606066 ONECUT1Q9UBC0 465 aa11.77□□□□□ -0.53
CTSA-211ENST00000606066 LOC100506127A0A0U1RQW1 187 aa11.76□□□□□ -0.53
CTSA-211ENST00000606066 A0A1W2PP11 408 aa11.76□□□□□ -0.53
CTSA-211ENST00000606066 hCG_1809904A0A1W2PP81 198 aa11.76□□□□□ -0.53
CTSA-211ENST00000606066 A0A1W2PPE2 198 aa11.76□□□□□ -0.53
CTSA-211ENST00000606066 A0A1W2PR64 198 aa11.76□□□□□ -0.53
CTSA-211ENST00000606066 A0A1W2PRV1 198 aa11.76□□□□□ -0.53
CTSA-211ENST00000606066 hADV38S2A0JD32 116 aa11.76□□□□□ -0.53
CTSA-211ENST00000606066 M0R1W7 72 aa11.76□□□□□ -0.53
CTSA-211ENST00000606066 SLC33A1O00400 549 aaPredicted RBP11.76□□□□□ -0.53
CTSA-211ENST00000606066 GEMIN2O14893 280 aaKnown RBP11.76□□□□□ -0.53
CTSA-211ENST00000606066 BPNT1O95861 308 aa11.76□□□□□ -0.53
CTSA-211ENST00000606066 CSN2P05814 226 aa11.76□□□□□ -0.53
CTSA-211ENST00000606066 ARSBP15848 533 aa11.76□□□□□ -0.53
CTSA-211ENST00000606066 MGMTP16455 207 aa11.76□□□□□ -0.53
CTSA-211ENST00000606066 GADD45AP24522 165 aa11.76□□□□□ -0.53
CTSA-211ENST00000606066 ERP29P30040 261 aaKnown RBP11.76□□□□□ -0.53
CTSA-211ENST00000606066 OR3A1P47881 315 aa11.76□□□□□ -0.53
CTSA-211ENST00000606066 KCNJ3P48549 501 aa11.76□□□□□ -0.53
CTSA-211ENST00000606066 MEF2CQ06413 473 aaPredicted RBP11.76□□□□□ -0.53
CTSA-211ENST00000606066 EDDM3AQ14507 147 aa11.76□□□□□ -0.53
CTSA-211ENST00000606066 PDCD1Q15116 288 aa11.76□□□□□ -0.53
CTSA-211ENST00000606066 PAN3Q58A45 887 aaKnown RBP11.76□□□□□ -0.53
CTSA-211ENST00000606066 C1orf229Q6ZS94 237 aaPredicted RBP11.76□□□□□ -0.53
CTSA-211ENST00000606066 C1orf122Q6ZSJ8 110 aa11.76□□□□□ -0.53
CTSA-211ENST00000606066 OR4S1Q8NGB4 309 aa11.76□□□□□ -0.53
CTSA-211ENST00000606066 OR4M1Q8NGD0 313 aa11.76□□□□□ -0.53
CTSA-211ENST00000606066 KCNG3Q8TAE7 436 aa11.76□□□□□ -0.53
CTSA-211ENST00000606066 C1orf147Q96MC9 270 aaPredicted RBP11.76□□□□□ -0.53
CTSA-211ENST00000606066 PCGF1Q9BSM1 259 aa11.76□□□□□ -0.53
CTSA-211ENST00000606066 BARHL1Q9BZE3 327 aa11.76□□□□□ -0.53
CTSA-211ENST00000606066 SELENOIQ9C0D9 397 aa11.76□□□□□ -0.53
CTSA-211ENST00000606066 C19orf12Q9NSK7 152 aa11.76□□□□□ -0.53
CTSA-211ENST00000606066 MALRD1Q5VYJ5 2156 aa11.76□□□□□ -0.53
CTSA-211ENST00000606066 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.76□□□□□ -0.534e-9■■■■□ 21.8
CTSA-211ENST00000606066 FAM90A10PA6NDY2 464 aa11.75□□□□□ -0.53
CTSA-211ENST00000606066 FAM90A18PA6NE21 464 aa11.75□□□□□ -0.53
CTSA-211ENST00000606066 FAM90A16PA6NEW6 464 aa11.75□□□□□ -0.53
CTSA-211ENST00000606066 FAM90A20PA6NIJ5 464 aa11.75□□□□□ -0.53
CTSA-211ENST00000606066 FAM90A8PA6NJQ4 464 aa11.75□□□□□ -0.53
CTSA-211ENST00000606066 FAM90A7PA6NKC0 464 aa11.75□□□□□ -0.53
CTSA-211ENST00000606066 FAM90A22PA8MWA6 464 aa11.75□□□□□ -0.53
CTSA-211ENST00000606066 FAM90A12PA8MX19 464 aa11.75□□□□□ -0.53
CTSA-211ENST00000606066 FAM90A5PA8MXJ8 464 aa11.75□□□□□ -0.53
CTSA-211ENST00000606066 FAM90A23PA8MXZ1 464 aa11.75□□□□□ -0.53
CTSA-211ENST00000606066 MPIG6BO95866 241 aa11.75□□□□□ -0.53
CTSA-211ENST00000606066 FAM90A15PP0C7V4 464 aa11.75□□□□□ -0.53
CTSA-211ENST00000606066 FAM90A13PP0C7W8 464 aa11.75□□□□□ -0.53
CTSA-211ENST00000606066 FAM90A14PP0C7W9 464 aa11.75□□□□□ -0.53
CTSA-211ENST00000606066 FAM90A24PP0C7X0 464 aa11.75□□□□□ -0.53
CTSA-211ENST00000606066 SMIM18P0DKX4 95 aa11.75□□□□□ -0.53
CTSA-211ENST00000606066 VSIG8P0DPA2 414 aa11.75□□□□□ -0.53
CTSA-211ENST00000606066 P2RX3P56373 397 aa11.75□□□□□ -0.53
CTSA-211ENST00000606066 TAF9Q16594 264 aa11.75□□□□□ -0.53
CTSA-211ENST00000606066 TMEM200BQ69YZ2 307 aa11.75□□□□□ -0.53
CTSA-211ENST00000606066 TMEM104Q8NE00 496 aa11.75□□□□□ -0.53
CTSA-211ENST00000606066 YIPF6Q96EC8 236 aa11.75□□□□□ -0.53
CTSA-211ENST00000606066 GFI1Q99684 422 aa11.75□□□□□ -0.53
CTSA-211ENST00000606066 PPA2Q9H2U2 334 aa11.75□□□□□ -0.53
CTSA-211ENST00000606066 BANF2Q9H503 90 aa11.75□□□□□ -0.53
CTSA-211ENST00000606066 STEAP1Q9UHE8 339 aa11.75□□□□□ -0.53
CTSA-211ENST00000606066 TRAV24A0A0B4J272 114 aa11.74□□□□□ -0.53
CTSA-211ENST00000606066 SHISA3A0PJX4 238 aa11.74□□□□□ -0.53
CTSA-211ENST00000606066 IFITM5A6NNB3 132 aa11.74□□□□□ -0.53
CTSA-211ENST00000606066 AIREO43918 545 aa11.74□□□□□ -0.53
CTSA-211ENST00000606066 MMP9P14780 707 aa11.74□□□□□ -0.53
CTSA-211ENST00000606066 CFPP27918 469 aa11.74□□□□□ -0.53
CTSA-211ENST00000606066 BPIFB3P59826 476 aa11.74□□□□□ -0.53
CTSA-211ENST00000606066 RBM39Q14498 530 aaKnown RBP11.74□□□□□ -0.53
CTSA-211ENST00000606066 P2RY14Q15391 338 aa11.74□□□□□ -0.53
CTSA-211ENST00000606066 KRBOX4Q5JUW0 171 aa11.74□□□□□ -0.53
CTSA-211ENST00000606066 ATAD3CQ5T2N8 411 aa11.74□□□□□ -0.53
CTSA-211ENST00000606066 GPR157Q5UAW9 335 aa11.74□□□□□ -0.53
CTSA-211ENST00000606066 OR2W3Q7Z3T1 314 aa11.74□□□□□ -0.53
CTSA-211ENST00000606066 SUMF2Q8NBJ7 301 aa11.74□□□□□ -0.53
CTSA-211ENST00000606066 FAM46BQ96A09 425 aa11.74□□□□□ -0.53
CTSA-211ENST00000606066 SLC25A28Q96A46 364 aa11.74□□□□□ -0.53
CTSA-211ENST00000606066 URM1Q9BTM9 101 aaKnown RBP11.74□□□□□ -0.53
CTSA-211ENST00000606066 DPCDQ9BVM2 203 aaPredicted RBP11.74□□□□□ -0.53
CTSA-211ENST00000606066 TMEM59Q9BXS4 323 aa11.74□□□□□ -0.53
CTSA-211ENST00000606066 SIRPDQ9H106 197 aa11.74□□□□□ -0.53
CTSA-211ENST00000606066 METTL8Q9H825 291 aaKnown RBP11.74□□□□□ -0.53
CTSA-211ENST00000606066 NUP50Q9UKX7 468 aa11.74□□□□□ -0.53
CTSA-211ENST00000606066 TRGV10A0A0A0MS01 117 aa11.73□□□□□ -0.53
CTSA-211ENST00000606066 NOTOA8MTQ0 251 aa11.73□□□□□ -0.53
CTSA-211ENST00000606066 TMEM14DPA8MWL7 114 aa11.73□□□□□ -0.53
CTSA-211ENST00000606066 MCRIP1C9JLW8 97 aa11.73□□□□□ -0.53
CTSA-211ENST00000606066 AIPO00170 330 aa11.73□□□□□ -0.53
CTSA-211ENST00000606066 HSPB6O14558 160 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms