RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 TPTE2P1Q5T6R2 138 aa14.32□□□□□ -0.12
CHMP2A-208ENST00000601220 TRUB1Q8WWH5 349 aaKnown RBP14.32□□□□□ -0.12
CHMP2A-208ENST00000601220 STMN2Q93045 179 aa14.32□□□□□ -0.12
CHMP2A-208ENST00000601220 CENPNQ96H22 339 aaPredicted RBP14.32□□□□□ -0.12
CHMP2A-208ENST00000601220 AKR1E2Q96JD6 320 aa14.32□□□□□ -0.12
CHMP2A-208ENST00000601220 SPACA5Q96QH8 159 aa14.32□□□□□ -0.12
CHMP2A-208ENST00000601220 INPP5EQ9NRR6 644 aa14.32□□□□□ -0.12
CHMP2A-208ENST00000601220 FAM90A18PA6NE21 464 aa14.31□□□□□ -0.12
CHMP2A-208ENST00000601220 FAM90A16PA6NEW6 464 aa14.31□□□□□ -0.12
CHMP2A-208ENST00000601220 FAM90A20PA6NIJ5 464 aa14.31□□□□□ -0.12
CHMP2A-208ENST00000601220 OR4C45A6NMZ5 311 aa14.31□□□□□ -0.12
CHMP2A-208ENST00000601220 FAM90A9PA6NNJ1 464 aa14.31□□□□□ -0.12
CHMP2A-208ENST00000601220 FAM90A12PA8MX19 464 aa14.31□□□□□ -0.12
CHMP2A-208ENST00000601220 FAM90A5PA8MXJ8 464 aa14.31□□□□□ -0.12
CHMP2A-208ENST00000601220 SLC33A1O00400 549 aaPredicted RBP14.31□□□□□ -0.12
CHMP2A-208ENST00000601220 SLC16A6O15403 523 aa14.31□□□□□ -0.12
CHMP2A-208ENST00000601220 MPIG6BO95866 241 aa14.31□□□□□ -0.12
CHMP2A-208ENST00000601220 FAM90A15PP0C7V4 464 aa14.31□□□□□ -0.12
CHMP2A-208ENST00000601220 FAM90A13PP0C7W8 464 aa14.31□□□□□ -0.12
CHMP2A-208ENST00000601220 FAM90A14PP0C7W9 464 aa14.31□□□□□ -0.12
CHMP2A-208ENST00000601220 FAM90A24PP0C7X0 464 aa14.31□□□□□ -0.12
CHMP2A-208ENST00000601220 FCGR1AP12314 374 aa14.31□□□□□ -0.12
CHMP2A-208ENST00000601220 ZNF20P17024 532 aa14.31□□□□□ -0.12
CHMP2A-208ENST00000601220 CDK5R1Q15078 307 aa14.31□□□□□ -0.12
CHMP2A-208ENST00000601220 SAXO1Q8IYX7 474 aa14.31□□□□□ -0.12
CHMP2A-208ENST00000601220 RHOFQ9HBH0 211 aa14.31□□□□□ -0.12
CHMP2A-208ENST00000601220 FUOMA2VDF0 154 aa14.3□□□□□ -0.12
CHMP2A-208ENST00000601220 PF4V1P10720 104 aa14.3□□□□□ -0.12
CHMP2A-208ENST00000601220 ZP1P60852 638 aa14.3□□□□□ -0.12
CHMP2A-208ENST00000601220 KPNB1Q14974 876 aaKnown RBP14.3□□□□□ -0.12
CHMP2A-208ENST00000601220 OR5D18Q8NGL1 313 aa14.3□□□□□ -0.12
CHMP2A-208ENST00000601220 OR13C9Q8NGT0 318 aa14.3□□□□□ -0.12
CHMP2A-208ENST00000601220 RNFT2Q96EX2 444 aa14.3□□□□□ -0.12
CHMP2A-208ENST00000601220 PELI1Q96FA3 418 aa14.3□□□□□ -0.12
CHMP2A-208ENST00000601220 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.3□□□□□ -0.12
CHMP2A-208ENST00000601220 MYRFQ9Y2G1 1151 aa14.3□□□□□ -0.12
CHMP2A-208ENST00000601220 DAPL1A0PJW8 107 aa14.29□□□□□ -0.12
CHMP2A-208ENST00000601220 PTGFRP43088 359 aa14.29□□□□□ -0.12
CHMP2A-208ENST00000601220 SNRPGP62308 76 aaKnown RBP14.29□□□□□ -0.12
CHMP2A-208ENST00000601220 SCN1BQ07699 218 aa14.29□□□□□ -0.12
CHMP2A-208ENST00000601220 KRBOX4Q5JUW0 171 aa14.29□□□□□ -0.12
CHMP2A-208ENST00000601220 CHST4Q8NCG5 386 aa14.29□□□□□ -0.12
CHMP2A-208ENST00000601220 CREB3L1Q96BA8 519 aa14.29□□□□□ -0.12
CHMP2A-208ENST00000601220 RCC1LQ96I51 464 aaKnown RBP14.29□□□□□ -0.12
CHMP2A-208ENST00000601220 HRASLS5Q96KN8 279 aa14.29□□□□□ -0.12
CHMP2A-208ENST00000601220 PPIL3Q9H2H8 161 aaKnown RBP14.29□□□□□ -0.12
CHMP2A-208ENST00000601220 ZCCHC4Q9H5U6 513 aa14.29□□□□□ -0.12
CHMP2A-208ENST00000601220 EXOGQ9Y2C4 368 aaKnown RBP14.29□□□□□ -0.12
CHMP2A-208ENST00000601220 SAC3D1A6NKF1 404 aa14.28□□□□□ -0.12
CHMP2A-208ENST00000601220 ZNF729A6NN14 1252 aaPredicted RBP14.28□□□□□ -0.12
CHMP2A-208ENST00000601220 OOSP1A8MZH6 123 aa14.28□□□□□ -0.12
CHMP2A-208ENST00000601220 DEGS1O15121 323 aa14.28□□□□□ -0.12
CHMP2A-208ENST00000601220 HTR1AP08908 422 aa14.28□□□□□ -0.12
CHMP2A-208ENST00000601220 ZNF44P15621 663 aa14.28□□□□□ -0.12
CHMP2A-208ENST00000601220 CEACAM3P40198 252 aa14.28□□□□□ -0.12
CHMP2A-208ENST00000601220 PRRX1P54821 245 aa14.28□□□□□ -0.12
CHMP2A-208ENST00000601220 SLC35A2P78381 396 aa14.28□□□□□ -0.12
CHMP2A-208ENST00000601220 EGFEM1PQ0D2K5 195 aa14.28□□□□□ -0.12
CHMP2A-208ENST00000601220 C1orf146Q5VVC0 180 aa14.28□□□□□ -0.12
CHMP2A-208ENST00000601220 THNSL2Q86YJ6 484 aa14.28□□□□□ -0.12
CHMP2A-208ENST00000601220 LINC00482Q8N8I6 264 aa14.28□□□□□ -0.12
CHMP2A-208ENST00000601220 OR4X2Q8NGF9 303 aa14.28□□□□□ -0.12
CHMP2A-208ENST00000601220 OR4D6Q8NGJ1 314 aa14.28□□□□□ -0.12
CHMP2A-208ENST00000601220 OR13C3Q8NGS6 347 aa14.28□□□□□ -0.12
CHMP2A-208ENST00000601220 KIRREL1Q96J84 757 aa14.28□□□□□ -0.12
CHMP2A-208ENST00000601220 ZNF649Q9BS31 505 aa14.28□□□□□ -0.12
CHMP2A-208ENST00000601220 LINC00574Q9H8X3 128 aa14.28□□□□□ -0.12
CHMP2A-208ENST00000601220 KBTBD11-OT1A0A1B0GTJ5 212 aa14.27□□□□□ -0.13
CHMP2A-208ENST00000601220 WI2-2373I1.2A0A1W2PRP0 233 aa14.27□□□□□ -0.13
CHMP2A-208ENST00000601220 J3QLW9 94 aa14.27□□□□□ -0.13
CHMP2A-208ENST00000601220 TOR1AO14656 332 aa14.27□□□□□ -0.13
CHMP2A-208ENST00000601220 PF4P02776 101 aa14.27□□□□□ -0.13
CHMP2A-208ENST00000601220 ALPLP05186 524 aa14.27□□□□□ -0.13
CHMP2A-208ENST00000601220 ZNF19P17023 458 aa14.27□□□□□ -0.13
CHMP2A-208ENST00000601220 OR3A4PP47883 348 aa14.27□□□□□ -0.13
CHMP2A-208ENST00000601220 ALKBH1Q13686 389 aaKnown RBP14.27□□□□□ -0.13
CHMP2A-208ENST00000601220 ATXN7L3Q14CW9 347 aaPredicted RBP14.27□□□□□ -0.13
CHMP2A-208ENST00000601220 ETV3LQ6ZN32 361 aa14.27□□□□□ -0.13
CHMP2A-208ENST00000601220 OSR2Q8N2R0 312 aa14.27□□□□□ -0.13
CHMP2A-208ENST00000601220 ACBD7Q8N6N7 88 aa14.27□□□□□ -0.13
CHMP2A-208ENST00000601220 OR51T1Q8NGJ9 327 aa14.27□□□□□ -0.13
CHMP2A-208ENST00000601220 OR9G1Q8NH87 305 aa14.27□□□□□ -0.13
CHMP2A-208ENST00000601220 CAPSLQ8WWF8 208 aa14.27□□□□□ -0.13
CHMP2A-208ENST00000601220 LGALS12Q96DT0 336 aa14.27□□□□□ -0.13
CHMP2A-208ENST00000601220 C4orf36Q96KX1 117 aa14.27□□□□□ -0.13
CHMP2A-208ENST00000601220 NCOR1P1Q9H4R4 102 aa14.27□□□□□ -0.13
CHMP2A-208ENST00000601220 ING3Q9NXR8 418 aa14.27□□□□□ -0.13
CHMP2A-208ENST00000601220 AASSQ9UDR5 926 aa14.27□□□□□ -0.13
CHMP2A-208ENST00000601220 NBEAL2Q6ZNJ1 2754 aa14.26□□□□□ -0.13
CHMP2A-208ENST00000601220 TRAV24A0A0B4J272 114 aa14.26□□□□□ -0.13
CHMP2A-208ENST00000601220 M0QZK8 103 aa14.26□□□□□ -0.13
CHMP2A-208ENST00000601220 GABRB1P18505 474 aa14.26□□□□□ -0.13
CHMP2A-208ENST00000601220 ARHGDIBP52566 201 aa14.26□□□□□ -0.13
CHMP2A-208ENST00000601220 DIAPH2-AS1Q14236 149 aa14.26□□□□□ -0.13
CHMP2A-208ENST00000601220 KISS1Q15726 138 aa14.26□□□□□ -0.13
CHMP2A-208ENST00000601220 VAX1Q5SQQ9 334 aa14.26□□□□□ -0.13
CHMP2A-208ENST00000601220 MEDAGQ5VYS4 303 aa14.26□□□□□ -0.13
CHMP2A-208ENST00000601220 ELP2Q6IA86 826 aa14.26□□□□□ -0.13
CHMP2A-208ENST00000601220 CCDC144NLQ6NUI1 221 aa14.26□□□□□ -0.13
CHMP2A-208ENST00000601220 PARP16Q8N5Y8 322 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms