RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 NLKQ9UBE8 527 aa13.93□□□□□ -0.18
SSBP4-207ENST00000600244 SLC22A13Q9Y226 551 aa13.93□□□□□ -0.18
SSBP4-207ENST00000600244 A0A1B0GTI1 187 aa13.92□□□□□ -0.18
SSBP4-207ENST00000600244 hCG_38984A0A1B0GV85 526 aa13.92□□□□□ -0.18
SSBP4-207ENST00000600244 hCG_1809904A0A1W2PP81 198 aa13.92□□□□□ -0.18
SSBP4-207ENST00000600244 A0A1W2PPE2 198 aa13.92□□□□□ -0.18
SSBP4-207ENST00000600244 A0A1W2PPH5 198 aa13.92□□□□□ -0.18
SSBP4-207ENST00000600244 A0A1W2PR64 198 aa13.92□□□□□ -0.18
SSBP4-207ENST00000600244 A0A1W2PRV1 198 aa13.92□□□□□ -0.18
SSBP4-207ENST00000600244 OR4C45A6NMZ5 311 aa13.92□□□□□ -0.18
SSBP4-207ENST00000600244 AKR7A2O43488 359 aa13.92□□□□□ -0.18
SSBP4-207ENST00000600244 AMY1AP04745 511 aa13.92□□□□□ -0.18
SSBP4-207ENST00000600244 AMY2AP04746 511 aa13.92□□□□□ -0.18
SSBP4-207ENST00000600244 CCL3L1P16619 93 aa13.92□□□□□ -0.18
SSBP4-207ENST00000600244 GABRA2P47869 451 aa13.92□□□□□ -0.18
SSBP4-207ENST00000600244 FAM3AP98173 230 aa13.92□□□□□ -0.18
SSBP4-207ENST00000600244 KCTD21Q4G0X4 260 aa13.92□□□□□ -0.18
SSBP4-207ENST00000600244 CCDC58Q4VC31 144 aa13.92□□□□□ -0.18
SSBP4-207ENST00000600244 XAF1Q6GPH4 301 aa13.92□□□□□ -0.18
SSBP4-207ENST00000600244 KRT74Q7RTS7 529 aa13.92□□□□□ -0.18
SSBP4-207ENST00000600244 OR11H6Q8NGC7 330 aa13.92□□□□□ -0.18
SSBP4-207ENST00000600244 ITFG2Q969R8 447 aa13.92□□□□□ -0.18
SSBP4-207ENST00000600244 RAX2Q96IS3 184 aa13.92□□□□□ -0.18
SSBP4-207ENST00000600244 DUX3Q96PT4 197 aa13.92□□□□□ -0.18
SSBP4-207ENST00000600244 OPA3Q9H6K4 179 aa13.92□□□□□ -0.18
SSBP4-207ENST00000600244 LIN7BQ9HAP6 207 aa13.92□□□□□ -0.18
SSBP4-207ENST00000600244 CHCHD3Q9NX63 227 aaKnown RBP13.92□□□□□ -0.18
SSBP4-207ENST00000600244 BABAM2Q9NXR7 383 aa13.92□□□□□ -0.18
SSBP4-207ENST00000600244 SORL1Q92673 2214 aa13.92□□□□□ -0.18
SSBP4-207ENST00000600244 PSMB11A5LHX3 300 aa13.91□□□□□ -0.18
SSBP4-207ENST00000600244 H3BUI4 141 aa13.91□□□□□ -0.18
SSBP4-207ENST00000600244 OGG1O15527 345 aa13.91□□□□□ -0.18
SSBP4-207ENST00000600244 TBX1O43435 398 aa13.91□□□□□ -0.18
SSBP4-207ENST00000600244 FRMD6-AS1P0C7T7 363 aa13.91□□□□□ -0.18
SSBP4-207ENST00000600244 PSG2P11465 335 aa13.91□□□□□ -0.18
SSBP4-207ENST00000600244 CCL1P22362 96 aa13.91□□□□□ -0.18
SSBP4-207ENST00000600244 CFL1P23528 166 aaKnown RBP13.91□□□□□ -0.18
SSBP4-207ENST00000600244 GBX2P52951 348 aaPredicted RBP13.91□□□□□ -0.18
SSBP4-207ENST00000600244 WNT4P56705 351 aa13.91□□□□□ -0.18
SSBP4-207ENST00000600244 RPL31P62899 125 aaKnown RBP13.91□□□□□ -0.18
SSBP4-207ENST00000600244 ALKBH1Q13686 389 aaKnown RBP13.91□□□□□ -0.18
SSBP4-207ENST00000600244 TIGD6Q17RP2 521 aa13.91□□□□□ -0.18
SSBP4-207ENST00000600244 BCL2L15Q5TBC7 163 aa13.91□□□□□ -0.18
SSBP4-207ENST00000600244 ZNF329Q86UD4 541 aa13.91□□□□□ -0.18
SSBP4-207ENST00000600244 SDSLQ96GA7 329 aa13.91□□□□□ -0.18
SSBP4-207ENST00000600244 REEP6Q96HR9 211 aa13.91□□□□□ -0.18
SSBP4-207ENST00000600244 TM2D3Q9BRN9 247 aa13.91□□□□□ -0.18
SSBP4-207ENST00000600244 ERGIC3Q9Y282 383 aa13.91□□□□□ -0.18
SSBP4-207ENST00000600244 N6AMT1Q9Y5N5 214 aa13.91□□□□□ -0.18
SSBP4-207ENST00000600244 SIRT4Q9Y6E7 314 aaPredicted RBP13.91□□□□□ -0.18
SSBP4-207ENST00000600244 C17orf98A8MV24 154 aa13.9□□□□□ -0.18
SSBP4-207ENST00000600244 NUDT19A8MXV4 375 aa13.9□□□□□ -0.18
SSBP4-207ENST00000600244 CCL24O00175 119 aa13.9□□□□□ -0.18
SSBP4-207ENST00000600244 ISG15P05161 165 aa13.9□□□□□ -0.18
SSBP4-207ENST00000600244 PGA5P0DJD9 388 aa13.9□□□□□ -0.18
SSBP4-207ENST00000600244 GTF2A1P52655 376 aaPredicted RBP13.9□□□□□ -0.18
SSBP4-207ENST00000600244 DLX6P56179 175 aa13.9□□□□□ -0.18
SSBP4-207ENST00000600244 TBCEQ15813 527 aaPredicted RBP13.9□□□□□ -0.18
SSBP4-207ENST00000600244 CALHM1Q8IU99 346 aa13.9□□□□□ -0.18
SSBP4-207ENST00000600244 KLHL30-AS1Q8NEE0 82 aa13.9□□□□□ -0.18
SSBP4-207ENST00000600244 RPL3LQ92901 407 aaKnown RBP13.9□□□□□ -0.18
SSBP4-207ENST00000600244 AKR1E2Q96JD6 320 aa13.9□□□□□ -0.18
SSBP4-207ENST00000600244 MND1Q9BWT6 205 aa13.9□□□□□ -0.18
SSBP4-207ENST00000600244 GPR84Q9NQS5 396 aa13.9□□□□□ -0.18
SSBP4-207ENST00000600244 HILPDAQ9Y5L2 63 aa13.9□□□□□ -0.18
SSBP4-207ENST00000600244 SH2D7A6NKC9 451 aaPredicted RBP13.89□□□□□ -0.19
SSBP4-207ENST00000600244 MYL12BO14950 172 aa13.89□□□□□ -0.19
SSBP4-207ENST00000600244 ATP6V1B1P15313 513 aa13.89□□□□□ -0.19
SSBP4-207ENST00000600244 GSK3AP49840 483 aa13.89□□□□□ -0.19
SSBP4-207ENST00000600244 RAB25P57735 213 aa13.89□□□□□ -0.19
SSBP4-207ENST00000600244 BDH1Q02338 343 aa13.89□□□□□ -0.19
SSBP4-207ENST00000600244 ZNF273Q14593 569 aa13.89□□□□□ -0.19
SSBP4-207ENST00000600244 CDK5R1Q15078 307 aa13.89□□□□□ -0.19
SSBP4-207ENST00000600244 SPHARQ15513 63 aa13.89□□□□□ -0.19
SSBP4-207ENST00000600244 FAM76BQ5HYJ3 339 aa13.89□□□□□ -0.19
SSBP4-207ENST00000600244 DMKNQ6E0U4 476 aaPredicted RBP13.89□□□□□ -0.19
SSBP4-207ENST00000600244 RPL22L1Q6P5R6 122 aaKnown RBP13.89□□□□□ -0.19
SSBP4-207ENST00000600244 LHFPL2Q6ZUX7 228 aa13.89□□□□□ -0.19
SSBP4-207ENST00000600244 SPARTQ8N0X7 666 aa13.89□□□□□ -0.19
SSBP4-207ENST00000600244 OR13D1Q8NGV5 346 aa13.89□□□□□ -0.19
SSBP4-207ENST00000600244 OR51E1Q8TCB6 317 aa13.89□□□□□ -0.19
SSBP4-207ENST00000600244 SEC14L6B5MCN3 397 aa13.88□□□□□ -0.19
SSBP4-207ENST00000600244 UBCP0CG48 685 aaKnown RBP13.88□□□□□ -0.19
SSBP4-207ENST00000600244 ACKR3P25106 362 aa13.88□□□□□ -0.19
SSBP4-207ENST00000600244 MAP2K4P45985 399 aa13.88□□□□□ -0.19
SSBP4-207ENST00000600244 MINOS1Q5TGZ0 78 aa13.88□□□□□ -0.19
SSBP4-207ENST00000600244 ZNF773Q6PK81 442 aa13.88□□□□□ -0.19
SSBP4-207ENST00000600244 ZNF695Q8IW36 515 aa13.88□□□□□ -0.19
SSBP4-207ENST00000600244 OR5M8Q8NGP6 311 aa13.88□□□□□ -0.19
SSBP4-207ENST00000600244 OR14K1Q8NGZ2 314 aa13.88□□□□□ -0.19
SSBP4-207ENST00000600244 CCDC90BQ9GZT6 254 aa13.88□□□□□ -0.19
SSBP4-207ENST00000600244 ACOT13Q9NPJ3 140 aa13.88□□□□□ -0.19
SSBP4-207ENST00000600244 MINOS1-NBL1R4GNA1 71 aa13.88□□□□□ -0.19
SSBP4-207ENST00000600244 V9GYS6 101 aa13.88□□□□□ -0.19
SSBP4-207ENST00000600244 TMEM212A6NML5 194 aa13.87□□□□□ -0.19
SSBP4-207ENST00000600244 DHRS7CA6NNS2 312 aa13.87□□□□□ -0.19
SSBP4-207ENST00000600244 TNFAIP8O95379 198 aa13.87□□□□□ -0.19
SSBP4-207ENST00000600244 CD1AP06126 327 aa13.87□□□□□ -0.19
SSBP4-207ENST00000600244 IGHV1-8P0DP01 117 aa13.87□□□□□ -0.19
SSBP4-207ENST00000600244 GNALP38405 381 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms