RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 RPS27AP62979 156 aaKnown RBP10.73□□□□□ -0.69
SCAF1-202ENST00000595242 FAM3AP98173 230 aa10.73□□□□□ -0.69
SCAF1-202ENST00000595242 RBMS2Q15434 407 aaKnown RBP10.73□□□□□ -0.69
SCAF1-202ENST00000595242 PNLIPRP3Q17RR3 467 aa10.73□□□□□ -0.69
SCAF1-202ENST00000595242 CLVS2Q5SYC1 327 aa10.73□□□□□ -0.69
SCAF1-202ENST00000595242 ASCL4Q6XD76 172 aa10.73□□□□□ -0.69
SCAF1-202ENST00000595242 Q6ZPA2 131 aa10.73□□□□□ -0.69
SCAF1-202ENST00000595242 Q6ZTK2 550 aa10.73□□□□□ -0.69
SCAF1-202ENST00000595242 LHFPL2Q6ZUX7 228 aa10.73□□□□□ -0.69
SCAF1-202ENST00000595242 ZNF101Q8IZC7 436 aa10.73□□□□□ -0.69
SCAF1-202ENST00000595242 OR56B1Q8NGI3 324 aa10.73□□□□□ -0.69
SCAF1-202ENST00000595242 OR2AE1Q8NHA4 323 aa10.73□□□□□ -0.69
SCAF1-202ENST00000595242 MED30Q96HR3 178 aa10.73□□□□□ -0.69
SCAF1-202ENST00000595242 POM121L2Q96KW2 1035 aa10.73□□□□□ -0.69
SCAF1-202ENST00000595242 SPACA5Q96QH8 159 aa10.73□□□□□ -0.69
SCAF1-202ENST00000595242 URM1Q9BTM9 101 aaKnown RBP10.73□□□□□ -0.69
SCAF1-202ENST00000595242 TMEM59Q9BXS4 323 aa10.73□□□□□ -0.69
SCAF1-202ENST00000595242 A0A0A6YYD4 124 aa10.72□□□□□ -0.69
SCAF1-202ENST00000595242 ZNF816-ZNF321PA0A0X1KG74 233 aa10.72□□□□□ -0.69
SCAF1-202ENST00000595242 J3QW42 95 aa10.72□□□□□ -0.69
SCAF1-202ENST00000595242 MFNGO00587 321 aa10.72□□□□□ -0.69
SCAF1-202ENST00000595242 GTF2F2P13984 249 aa10.72□□□□□ -0.69
SCAF1-202ENST00000595242 NAT1P18440 290 aa10.72□□□□□ -0.69
SCAF1-202ENST00000595242 TBPP20226 339 aa10.72□□□□□ -0.69
SCAF1-202ENST00000595242 RAD52P43351 418 aa10.72□□□□□ -0.69
SCAF1-202ENST00000595242 LCN2P80188 198 aa10.72□□□□□ -0.69
SCAF1-202ENST00000595242 ZNF92Q03936 586 aa10.72□□□□□ -0.69
SCAF1-202ENST00000595242 ZMYND11Q15326 602 aa10.72□□□□□ -0.69
SCAF1-202ENST00000595242 SFRP4Q6FHJ7 346 aaPredicted RBP10.72□□□□□ -0.69
SCAF1-202ENST00000595242 STEAP1BQ6NZ63 245 aa10.72□□□□□ -0.69
SCAF1-202ENST00000595242 LRP11Q86VZ4 500 aa10.72□□□□□ -0.69
SCAF1-202ENST00000595242 CCDC36Q8IYA8 594 aa10.72□□□□□ -0.69
SCAF1-202ENST00000595242 ZBTB8BQ8NAP8 495 aaPredicted RBP10.72□□□□□ -0.69
SCAF1-202ENST00000595242 TMEM104Q8NE00 496 aa10.72□□□□□ -0.69
SCAF1-202ENST00000595242 GIMAP1Q8WWP7 306 aa10.72□□□□□ -0.69
SCAF1-202ENST00000595242 APOBEC3DQ96AK3 386 aaPredicted RBP10.72□□□□□ -0.69
SCAF1-202ENST00000595242 RNF170Q96K19 258 aa10.72□□□□□ -0.69
SCAF1-202ENST00000595242 ZNF75AQ96N20 296 aa10.72□□□□□ -0.69
SCAF1-202ENST00000595242 GPER1Q99527 375 aa10.72□□□□□ -0.69
SCAF1-202ENST00000595242 OR51J1Q9H342 316 aa10.72□□□□□ -0.69
SCAF1-202ENST00000595242 BEX1Q9HBH7 125 aa10.72□□□□□ -0.69
SCAF1-202ENST00000595242 MCUBQ9NWR8 336 aa10.72□□□□□ -0.69
SCAF1-202ENST00000595242 SLC2A8Q9NY64 477 aa10.72□□□□□ -0.69
SCAF1-202ENST00000595242 IL36GQ9NZH8 169 aa10.72□□□□□ -0.69
SCAF1-202ENST00000595242 MYEF2Q9P2K5 600 aaKnown RBP10.72□□□□□ -0.69
SCAF1-202ENST00000595242 TMEM235A6NFC5 223 aa10.71□□□□□ -0.69
SCAF1-202ENST00000595242 MPIG6BO95866 241 aa10.71□□□□□ -0.69
SCAF1-202ENST00000595242 HLA-HP01893 362 aa10.71□□□□□ -0.69
SCAF1-202ENST00000595242 CD3DP04234 171 aa10.71□□□□□ -0.69
SCAF1-202ENST00000595242 HIST1H1DP16402 221 aaKnown RBP10.71□□□□□ -0.69
SCAF1-202ENST00000595242 STOMP27105 288 aa10.71□□□□□ -0.69
SCAF1-202ENST00000595242 VEGFCP49767 419 aa10.71□□□□□ -0.69
SCAF1-202ENST00000595242 RAB1AP62820 205 aa10.71□□□□□ -0.69
SCAF1-202ENST00000595242 ARL6IP1Q15041 203 aa10.71□□□□□ -0.69
SCAF1-202ENST00000595242 ZFP69Q49AA0 526 aa10.71□□□□□ -0.69
SCAF1-202ENST00000595242 CDNFQ49AH0 187 aa10.71□□□□□ -0.69
SCAF1-202ENST00000595242 KLF17Q5JT82 389 aaPredicted RBP10.71□□□□□ -0.69
SCAF1-202ENST00000595242 METTL11BQ5VVY1 283 aa10.71□□□□□ -0.69
SCAF1-202ENST00000595242 MDP1Q86V88 176 aa10.71□□□□□ -0.69
SCAF1-202ENST00000595242 TNFAIP8L1Q8WVP5 186 aa10.71□□□□□ -0.69
SCAF1-202ENST00000595242 NICN1Q9BSH3 213 aa10.71□□□□□ -0.69
SCAF1-202ENST00000595242 TANC2Q9HCD6 1990 aa10.71□□□□□ -0.69
SCAF1-202ENST00000595242 RANGRFQ9HD47 186 aaPredicted RBP10.71□□□□□ -0.69
SCAF1-202ENST00000595242 GPR173Q9NS66 373 aa10.71□□□□□ -0.69
SCAF1-202ENST00000595242 ING3Q9NXR8 418 aa10.71□□□□□ -0.69
SCAF1-202ENST00000595242 COL7A1Q02388 2944 aa10.71□□□□□ -0.7
SCAF1-202ENST00000595242 SNRPGP15A8MWD9 76 aa10.7□□□□□ -0.7
SCAF1-202ENST00000595242 ARPC1BO15143 372 aaKnown RBP10.7□□□□□ -0.7
SCAF1-202ENST00000595242 SSX5O60225 188 aa10.7□□□□□ -0.7
SCAF1-202ENST00000595242 RAB3DO95716 219 aa10.7□□□□□ -0.7
SCAF1-202ENST00000595242 NRASP01111 189 aa10.7□□□□□ -0.7
SCAF1-202ENST00000595242 C1QBP02746 253 aa10.7□□□□□ -0.7
SCAF1-202ENST00000595242 ZNF735P0CB33 412 aa10.7□□□□□ -0.7
SCAF1-202ENST00000595242 SULT1A3P0DMM9 295 aa10.7□□□□□ -0.7
SCAF1-202ENST00000595242 SULT1A4P0DMN0 295 aa10.7□□□□□ -0.7
SCAF1-202ENST00000595242 MGMTP16455 207 aa10.7□□□□□ -0.7
SCAF1-202ENST00000595242 GLRXP35754 106 aa10.7□□□□□ -0.7
SCAF1-202ENST00000595242 FUT6P51993 359 aa10.7□□□□□ -0.7
SCAF1-202ENST00000595242 TMEM50BP56557 158 aa10.7□□□□□ -0.7
SCAF1-202ENST00000595242 PLP2Q04941 152 aa10.7□□□□□ -0.7
SCAF1-202ENST00000595242 MAB21L1Q13394 359 aa10.7□□□□□ -0.7
SCAF1-202ENST00000595242 MEF2DQ14814 521 aa10.7□□□□□ -0.7
SCAF1-202ENST00000595242 KCNJ8Q15842 424 aa10.7□□□□□ -0.7
SCAF1-202ENST00000595242 FAAP20Q6NZ36 180 aa10.7□□□□□ -0.7
SCAF1-202ENST00000595242 GLDNQ6ZMI3 551 aaPredicted RBP10.7□□□□□ -0.7
SCAF1-202ENST00000595242 ZNF584Q8IVC4 421 aa10.7□□□□□ -0.7
SCAF1-202ENST00000595242 DEFB108BQ8NET1 73 aa10.7□□□□□ -0.7
SCAF1-202ENST00000595242 PXT1Q8NFP0 134 aa10.7□□□□□ -0.7
SCAF1-202ENST00000595242 FYTTD1Q96QD9 318 aaKnown RBP10.7□□□□□ -0.7
SCAF1-202ENST00000595242 ALX4Q9H161 411 aaPredicted RBP10.7□□□□□ -0.7
SCAF1-202ENST00000595242 MED28Q9H204 178 aa10.7□□□□□ -0.7
SCAF1-202ENST00000595242 DUSP13Q9UII6 198 aa10.7□□□□□ -0.7
SCAF1-202ENST00000595242 FZR1Q9UM11 496 aa10.7□□□□□ -0.7
SCAF1-202ENST00000595242 WIPI2Q9Y4P8 454 aa10.7□□□□□ -0.7
SCAF1-202ENST00000595242 NPTNQ9Y639 398 aa10.7□□□□□ -0.7
SCAF1-202ENST00000595242 TET2Q6N021 2002 aaPredicted RBP10.69□□□□□ -0.7
SCAF1-202ENST00000595242 IGKV1-27A0A075B6S5 117 aa10.69□□□□□ -0.7
SCAF1-202ENST00000595242 ZNF736B4DX44 427 aaPredicted RBP10.69□□□□□ -0.7
SCAF1-202ENST00000595242 SOCS1O15524 211 aa10.69□□□□□ -0.7
SCAF1-202ENST00000595242 AKR7A2O43488 359 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms