RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 CSN2P05814 226 aa18.05■□□□□ 0.48
SSBP4-203ENST00000593641 LMO1P25800 156 aa18.05■□□□□ 0.48
SSBP4-203ENST00000593641 RBM39Q14498 530 aaKnown RBP18.05■□□□□ 0.48
SSBP4-203ENST00000593641 KRBOX4Q5JUW0 171 aa18.05■□□□□ 0.48
SSBP4-203ENST00000593641 KCTD20Q7Z5Y7 419 aa18.05■□□□□ 0.48
SSBP4-203ENST00000593641 CHST4Q8NCG5 386 aa18.05■□□□□ 0.48
SSBP4-203ENST00000593641 MBOAT4Q96T53 435 aa18.05■□□□□ 0.48
SSBP4-203ENST00000593641 RHOFQ9HBH0 211 aa18.05■□□□□ 0.48
SSBP4-203ENST00000593641 ING3Q9NXR8 418 aa18.05■□□□□ 0.48
SSBP4-203ENST00000593641 FRRS1LQ9P0K9 344 aa18.05■□□□□ 0.48
SSBP4-203ENST00000593641 HHLA2Q9UM44 414 aa18.05■□□□□ 0.48
SSBP4-203ENST00000593641 IGKV1-12A0A0C4DH73 117 aa18.04■□□□□ 0.48
SSBP4-203ENST00000593641 SH2D7A6NKC9 451 aaPredicted RBP18.04■□□□□ 0.48
SSBP4-203ENST00000593641 OOSP1A8MZH6 123 aa18.04■□□□□ 0.48
SSBP4-203ENST00000593641 IGKV1D-12P01611 117 aa18.04■□□□□ 0.48
SSBP4-203ENST00000593641 HTR1AP08908 422 aa18.04■□□□□ 0.48
SSBP4-203ENST00000593641 GDNFP39905 211 aa18.04■□□□□ 0.48
SSBP4-203ENST00000593641 OR3A4PP47883 348 aa18.04■□□□□ 0.48
SSBP4-203ENST00000593641 OSR2Q8N2R0 312 aa18.04■□□□□ 0.48
SSBP4-203ENST00000593641 OR13C3Q8NGS6 347 aa18.04■□□□□ 0.48
SSBP4-203ENST00000593641 DPF1Q92782 380 aa18.04■□□□□ 0.48
SSBP4-203ENST00000593641 RNF166Q96A37 237 aaPredicted RBP18.04■□□□□ 0.48
SSBP4-203ENST00000593641 SPACA5Q96QH8 159 aa18.04■□□□□ 0.48
SSBP4-203ENST00000593641 GPR61Q9BZJ8 451 aa18.04■□□□□ 0.48
SSBP4-203ENST00000593641 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.04■□□□□ 0.48
SSBP4-203ENST00000593641 IMPAD1Q9NX62 359 aa18.04■□□□□ 0.48
SSBP4-203ENST00000593641 NBEAL2Q6ZNJ1 2754 aa18.03■□□□□ 0.48
SSBP4-203ENST00000593641 A0A087X0M5 115 aa18.03■□□□□ 0.48
SSBP4-203ENST00000593641 A0A1B0GX30 115 aa18.03■□□□□ 0.48
SSBP4-203ENST00000593641 ZNF729A6NN14 1252 aaPredicted RBP18.03■□□□□ 0.48
SSBP4-203ENST00000593641 MT-ND2P03891 347 aa18.03■□□□□ 0.48
SSBP4-203ENST00000593641 AMY1AP04745 511 aa18.03■□□□□ 0.48
SSBP4-203ENST00000593641 AMY2AP04746 511 aa18.03■□□□□ 0.48
SSBP4-203ENST00000593641 FAM106CPP0CH98 169 aa18.03■□□□□ 0.48
SSBP4-203ENST00000593641 BNIP1Q12981 228 aa18.03■□□□□ 0.48
SSBP4-203ENST00000593641 ATXN7L3Q14CW9 347 aaPredicted RBP18.03■□□□□ 0.48
SSBP4-203ENST00000593641 DEFB121Q5J5C9 76 aa18.03■□□□□ 0.48
SSBP4-203ENST00000593641 C10orf99Q6UWK7 81 aa18.03■□□□□ 0.48
SSBP4-203ENST00000593641 OR13C9Q8NGT0 318 aa18.03■□□□□ 0.48
SSBP4-203ENST00000593641 RPEQ96AT9 228 aa18.03■□□□□ 0.48
SSBP4-203ENST00000593641 INPP5EQ9NRR6 644 aa18.03■□□□□ 0.48
SSBP4-203ENST00000593641 OR6C3Q9NZP0 311 aa18.03■□□□□ 0.48
SSBP4-203ENST00000593641 MOB4Q9Y3A3 225 aa18.03■□□□□ 0.48
SSBP4-203ENST00000593641 HSPE1-MOB4S4R3N1 261 aa18.03■□□□□ 0.48
SSBP4-203ENST00000593641 DNAH9Q9NYC9 4486 aa18.02■□□□□ 0.48
SSBP4-203ENST00000593641 DAPL1A0PJW8 107 aa18.02■□□□□ 0.48
SSBP4-203ENST00000593641 PSMB11A5LHX3 300 aa18.02■□□□□ 0.48
SSBP4-203ENST00000593641 SLC16A6O15403 523 aa18.02■□□□□ 0.48
SSBP4-203ENST00000593641 NFYBP25208 207 aa18.02■□□□□ 0.48
SSBP4-203ENST00000593641 NANOS3P60323 173 aaKnown RBP18.02■□□□□ 0.48
SSBP4-203ENST00000593641 COL7A1Q02388 2944 aa18.02■□□□□ 0.48
SSBP4-203ENST00000593641 C1orf146Q5VVC0 180 aa18.02■□□□□ 0.48
SSBP4-203ENST00000593641 FDX2Q6P4F2 183 aa18.02■□□□□ 0.48
SSBP4-203ENST00000593641 SAXO1Q8IYX7 474 aa18.02■□□□□ 0.48
SSBP4-203ENST00000593641 OR51D1Q8NGF3 324 aa18.02■□□□□ 0.48
SSBP4-203ENST00000593641 COQ2Q96H96 371 aa18.02■□□□□ 0.48
SSBP4-203ENST00000593641 PCDHB16Q9NRJ7 776 aa18.02■□□□□ 0.48
SSBP4-203ENST00000593641 OAZ3Q9UMX2 235 aa18.02■□□□□ 0.48
SSBP4-203ENST00000593641 AMMECR1Q9Y4X0 333 aaPredicted RBP18.02■□□□□ 0.48
SSBP4-203ENST00000593641 SLC33A1O00400 549 aaPredicted RBP18.01■□□□□ 0.47
SSBP4-203ENST00000593641 DEGS1O15121 323 aa18.01■□□□□ 0.47
SSBP4-203ENST00000593641 CCR9P51686 369 aa18.01■□□□□ 0.47
SSBP4-203ENST00000593641 OR51A4Q8NGJ6 313 aa18.01■□□□□ 0.47
SSBP4-203ENST00000593641 OR10AC1Q8NH08 325 aa18.01■□□□□ 0.47
SSBP4-203ENST00000593641 OR9G1Q8NH87 305 aa18.01■□□□□ 0.47
SSBP4-203ENST00000593641 TRUB1Q8WWH5 349 aaKnown RBP18.01■□□□□ 0.47
SSBP4-203ENST00000593641 TOMM40LQ969M1 308 aa18.01■□□□□ 0.47
SSBP4-203ENST00000593641 RNFT2Q96EX2 444 aa18.01■□□□□ 0.47
SSBP4-203ENST00000593641 E9PQ18 207 aa18■□□□□ 0.47
SSBP4-203ENST00000593641 LY6LH3BQJ8 138 aa18■□□□□ 0.47
SSBP4-203ENST00000593641 HCKP08631 526 aa18■□□□□ 0.47
SSBP4-203ENST00000593641 GLP1RP43220 463 aa18■□□□□ 0.47
SSBP4-203ENST00000593641 KRTAP10-11P60412 298 aa18■□□□□ 0.47
SSBP4-203ENST00000593641 Q6P435 159 aa18■□□□□ 0.47
SSBP4-203ENST00000593641 LINC00482Q8N8I6 264 aa18■□□□□ 0.47
SSBP4-203ENST00000593641 CENPNQ96H22 339 aaPredicted RBP18■□□□□ 0.47
SSBP4-203ENST00000593641 KIRREL1Q96J84 757 aa18■□□□□ 0.47
SSBP4-203ENST00000593641 HRASLS5Q96KN8 279 aa18■□□□□ 0.47
SSBP4-203ENST00000593641 ZNF649Q9BS31 505 aa18■□□□□ 0.47
SSBP4-203ENST00000593641 ZCCHC4Q9H5U6 513 aa18■□□□□ 0.47
SSBP4-203ENST00000593641 KBTBD11-OT1A0A1B0GTJ5 212 aa17.99■□□□□ 0.47
SSBP4-203ENST00000593641 WI2-2373I1.2A0A1W2PRP0 233 aa17.99■□□□□ 0.47
SSBP4-203ENST00000593641 TMEM225BP0DP42 221 aa17.99■□□□□ 0.47
SSBP4-203ENST00000593641 DBTP11182 482 aaKnown RBP17.99■□□□□ 0.47
SSBP4-203ENST00000593641 HOXD3P31249 432 aaPredicted RBP17.99■□□□□ 0.47
SSBP4-203ENST00000593641 C17orf58Q2M2W7 97 aa17.99■□□□□ 0.47
SSBP4-203ENST00000593641 RNF144BQ7Z419 303 aa17.99■□□□□ 0.47
SSBP4-203ENST00000593641 ZNF565Q8N9K5 539 aa17.99■□□□□ 0.47
SSBP4-203ENST00000593641 MRPL48Q96GC5 212 aaKnown RBP17.99■□□□□ 0.47
SSBP4-203ENST00000593641 OSBPL10Q9BXB5 764 aa17.99■□□□□ 0.47
SSBP4-203ENST00000593641 PPIL3Q9H2H8 161 aaKnown RBP17.99■□□□□ 0.47
SSBP4-203ENST00000593641 MYRFQ9Y2G1 1151 aa17.99■□□□□ 0.47
SSBP4-203ENST00000593641 SAC3D1A6NKF1 404 aa17.98■□□□□ 0.47
SSBP4-203ENST00000593641 SNTNA6NMZ2 147 aa17.98■□□□□ 0.47
SSBP4-203ENST00000593641 J3QLW9 94 aa17.98■□□□□ 0.47
SSBP4-203ENST00000593641 HSPB6O14558 160 aa17.98■□□□□ 0.47
SSBP4-203ENST00000593641 SNRNP70P08621 437 aaKnown RBP17.98■□□□□ 0.47
SSBP4-203ENST00000593641 ZNF19P17023 458 aa17.98■□□□□ 0.47
SSBP4-203ENST00000593641 RASSF2P50749 326 aa17.98■□□□□ 0.47
SSBP4-203ENST00000593641 EGFEM1PQ0D2K5 195 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms