RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 HLA-DRB5Q30154 266 aa19.07■□□□□ 0.64
LSM4-202ENST00000593564 C1orf146Q5VVC0 180 aa19.07■□□□□ 0.64
LSM4-202ENST00000593564 SAXO1Q8IYX7 474 aa19.07■□□□□ 0.64
LSM4-202ENST00000593564 CHST4Q8NCG5 386 aa19.07■□□□□ 0.64
LSM4-202ENST00000593564 TRUB1Q8WWH5 349 aaKnown RBP19.07■□□□□ 0.64
LSM4-202ENST00000593564 CENPNQ96H22 339 aaPredicted RBP19.07■□□□□ 0.64
LSM4-202ENST00000593564 OSBPL10Q9BXB5 764 aa19.07■□□□□ 0.64
LSM4-202ENST00000593564 BUB1B-PAK6H3BSN5 160 aa19.06■□□□□ 0.64
LSM4-202ENST00000593564 SLC16A6O15403 523 aa19.06■□□□□ 0.64
LSM4-202ENST00000593564 MPIG6BO95866 241 aa19.06■□□□□ 0.64
LSM4-202ENST00000593564 ZNF44P15621 663 aa19.06■□□□□ 0.64
LSM4-202ENST00000593564 TPTE2P1Q5T6R2 138 aa19.06■□□□□ 0.64
LSM4-202ENST00000593564 OR4D6Q8NGJ1 314 aa19.06■□□□□ 0.64
LSM4-202ENST00000593564 OR5D18Q8NGL1 313 aa19.06■□□□□ 0.64
LSM4-202ENST00000593564 OR10AC1Q8NH08 325 aa19.06■□□□□ 0.64
LSM4-202ENST00000593564 COQ2Q96H96 371 aa19.06■□□□□ 0.64
LSM4-202ENST00000593564 SPACA5Q96QH8 159 aa19.06■□□□□ 0.64
LSM4-202ENST00000593564 KMT2CQ8NEZ4 4911 aaKnown RBP19.05■□□□□ 0.64
LSM4-202ENST00000593564 DAPL1A0PJW8 107 aa19.05■□□□□ 0.64
LSM4-202ENST00000593564 OOSP1A8MZH6 123 aa19.05■□□□□ 0.64
LSM4-202ENST00000593564 LY6LH3BQJ8 138 aa19.05■□□□□ 0.64
LSM4-202ENST00000593564 M0QZK8 103 aa19.05■□□□□ 0.64
LSM4-202ENST00000593564 TOR1AO14656 332 aa19.05■□□□□ 0.64
LSM4-202ENST00000593564 HTR1AP08908 422 aa19.05■□□□□ 0.64
LSM4-202ENST00000593564 PRRX1P54821 245 aa19.05■□□□□ 0.64
LSM4-202ENST00000593564 KRBOX4Q5JUW0 171 aa19.05■□□□□ 0.64
LSM4-202ENST00000593564 SLC25A30Q5SVS4 291 aa19.05■□□□□ 0.64
LSM4-202ENST00000593564 CCDC144NLQ6NUI1 221 aa19.05■□□□□ 0.64
LSM4-202ENST00000593564 Q6P435 159 aa19.05■□□□□ 0.64
LSM4-202ENST00000593564 RNF144BQ7Z419 303 aa19.05■□□□□ 0.64
LSM4-202ENST00000593564 OR51A4Q8NGJ6 313 aa19.05■□□□□ 0.64
LSM4-202ENST00000593564 OR13C3Q8NGS6 347 aa19.05■□□□□ 0.64
LSM4-202ENST00000593564 OR13C9Q8NGT0 318 aa19.05■□□□□ 0.64
LSM4-202ENST00000593564 RNFT2Q96EX2 444 aa19.05■□□□□ 0.64
LSM4-202ENST00000593564 RCC1LQ96I51 464 aaKnown RBP19.05■□□□□ 0.64
LSM4-202ENST00000593564 IMPAD1Q9NX62 359 aa19.05■□□□□ 0.64
LSM4-202ENST00000593564 DNAH9Q9NYC9 4486 aa19.04■□□□□ 0.64
LSM4-202ENST00000593564 ZNF729A6NN14 1252 aaPredicted RBP19.04■□□□□ 0.64
LSM4-202ENST00000593564 SLC33A1O00400 549 aaPredicted RBP19.04■□□□□ 0.64
LSM4-202ENST00000593564 DUS4LO95620 317 aaKnown RBP19.04■□□□□ 0.64
LSM4-202ENST00000593564 SCN1BQ07699 218 aa19.04■□□□□ 0.64
LSM4-202ENST00000593564 NEK6Q9HC98 313 aa19.04■□□□□ 0.64
LSM4-202ENST00000593564 SH2D7A6NKC9 451 aaPredicted RBP19.03■□□□□ 0.64
LSM4-202ENST00000593564 SAC3D1A6NKF1 404 aa19.03■□□□□ 0.64
LSM4-202ENST00000593564 OR4C45A6NMZ5 311 aa19.03■□□□□ 0.64
LSM4-202ENST00000593564 K7EIL1 84 aa19.03■□□□□ 0.64
LSM4-202ENST00000593564 MNDAP41218 407 aa19.03■□□□□ 0.64
LSM4-202ENST00000593564 RASSF2P50749 326 aa19.03■□□□□ 0.64
LSM4-202ENST00000593564 C17orf58Q2M2W7 97 aa19.03■□□□□ 0.64
LSM4-202ENST00000593564 C10orf99Q6UWK7 81 aa19.03■□□□□ 0.64
LSM4-202ENST00000593564 PELI1Q96FA3 418 aa19.03■□□□□ 0.64
LSM4-202ENST00000593564 ZCCHC4Q9H5U6 513 aa19.03■□□□□ 0.64
LSM4-202ENST00000593564 OR6C3Q9NZP0 311 aa19.03■□□□□ 0.64
LSM4-202ENST00000593564 DEGS1O15121 323 aa19.02■□□□□ 0.64
LSM4-202ENST00000593564 CLIC3O95833 236 aa19.02■□□□□ 0.64
LSM4-202ENST00000593564 OR3A4PP47883 348 aa19.02■□□□□ 0.64
LSM4-202ENST00000593564 SNRPGP62308 76 aaKnown RBP19.02■□□□□ 0.64
LSM4-202ENST00000593564 ALKBH1Q13686 389 aaKnown RBP19.02■□□□□ 0.64
LSM4-202ENST00000593564 ATXN7L3Q14CW9 347 aaPredicted RBP19.02■□□□□ 0.64
LSM4-202ENST00000593564 KHDC1LQ5JSQ8 128 aa19.02■□□□□ 0.64
LSM4-202ENST00000593564 MEDAGQ5VYS4 303 aa19.02■□□□□ 0.64
LSM4-202ENST00000593564 OSR2Q8N2R0 312 aa19.02■□□□□ 0.64
LSM4-202ENST00000593564 ACBD7Q8N6N7 88 aa19.02■□□□□ 0.64
LSM4-202ENST00000593564 HRASLS5Q96KN8 279 aa19.02■□□□□ 0.64
LSM4-202ENST00000593564 INPP5EQ9NRR6 644 aa19.02■□□□□ 0.64
LSM4-202ENST00000593564 ING3Q9NXR8 418 aa19.02■□□□□ 0.64
LSM4-202ENST00000593564 MYRFQ9Y2G1 1151 aa19.02■□□□□ 0.64
LSM4-202ENST00000593564 KBTBD11-OT1A0A1B0GTJ5 212 aa19.01■□□□□ 0.63
LSM4-202ENST00000593564 J3QLW9 94 aa19.01■□□□□ 0.63
LSM4-202ENST00000593564 FAM106CPP0CH98 169 aa19.01■□□□□ 0.63
LSM4-202ENST00000593564 ZNF19P17023 458 aa19.01■□□□□ 0.63
LSM4-202ENST00000593564 ZP1P60852 638 aa19.01■□□□□ 0.63
LSM4-202ENST00000593564 RBM39Q14498 530 aaKnown RBP19.01■□□□□ 0.63
LSM4-202ENST00000593564 CDK5R1Q15078 307 aa19.01■□□□□ 0.63
LSM4-202ENST00000593564 UTF1Q5T230 341 aa19.01■□□□□ 0.63
LSM4-202ENST00000593564 OR9G1Q8NH87 305 aa19.01■□□□□ 0.63
LSM4-202ENST00000593564 KIRREL1Q96J84 757 aa19.01■□□□□ 0.63
LSM4-202ENST00000593564 C4orf36Q96KX1 117 aa19.01■□□□□ 0.63
LSM4-202ENST00000593564 PPIL3Q9H2H8 161 aaKnown RBP19.01■□□□□ 0.63
LSM4-202ENST00000593564 PCDHB16Q9NRJ7 776 aa19.01■□□□□ 0.63
LSM4-202ENST00000593564 MOB4Q9Y3A3 225 aa19.01■□□□□ 0.63
LSM4-202ENST00000593564 HSPE1-MOB4S4R3N1 261 aa19.01■□□□□ 0.63
LSM4-202ENST00000593564 FAM90A18PA6NE21 464 aa19■□□□□ 0.63
LSM4-202ENST00000593564 FAM90A16PA6NEW6 464 aa19■□□□□ 0.63
LSM4-202ENST00000593564 FAM90A20PA6NIJ5 464 aa19■□□□□ 0.63
LSM4-202ENST00000593564 FAM90A9PA6NNJ1 464 aa19■□□□□ 0.63
LSM4-202ENST00000593564 FAM90A12PA8MX19 464 aa19■□□□□ 0.63
LSM4-202ENST00000593564 FAM90A5PA8MXJ8 464 aa19■□□□□ 0.63
LSM4-202ENST00000593564 FAM90A15PP0C7V4 464 aa19■□□□□ 0.63
LSM4-202ENST00000593564 FAM90A13PP0C7W8 464 aa19■□□□□ 0.63
LSM4-202ENST00000593564 FAM90A14PP0C7W9 464 aa19■□□□□ 0.63
LSM4-202ENST00000593564 FAM90A24PP0C7X0 464 aa19■□□□□ 0.63
LSM4-202ENST00000593564 CGB3P0DN86 165 aa19■□□□□ 0.63
LSM4-202ENST00000593564 CGB7P0DN87 165 aa19■□□□□ 0.63
LSM4-202ENST00000593564 TMEM225BP0DP42 221 aa19■□□□□ 0.63
LSM4-202ENST00000593564 DBTP11182 482 aaKnown RBP19■□□□□ 0.63
LSM4-202ENST00000593564 NFYBP25208 207 aa19■□□□□ 0.63
LSM4-202ENST00000593564 C9orf152Q5JTZ5 239 aa19■□□□□ 0.63
LSM4-202ENST00000593564 THNSL2Q86YJ6 484 aa19■□□□□ 0.63
LSM4-202ENST00000593564 OR51T1Q8NGJ9 327 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms