RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 ALOX5APP20292 161 aa3.69□□□□□ -1.82
SMAD4-216ENST00000593223 F2RP25116 425 aa3.69□□□□□ -1.82
SMAD4-216ENST00000593223 SHMT2P34897 504 aa3.69□□□□□ -1.82
SMAD4-216ENST00000593223 HRH1P35367 487 aa3.69□□□□□ -1.82
SMAD4-216ENST00000593223 SULT1A1P50225 295 aa3.69□□□□□ -1.82
SMAD4-216ENST00000593223 SULT1A2P50226 295 aa3.69□□□□□ -1.82
SMAD4-216ENST00000593223 HNRNPA3P51991 378 aaKnown RBP3.69□□□□□ -1.82
SMAD4-216ENST00000593223 HCCSP53701 268 aa3.69□□□□□ -1.82
SMAD4-216ENST00000593223 DLX6P56179 175 aa3.69□□□□□ -1.82
SMAD4-216ENST00000593223 CLDN12P56749 244 aa3.69□□□□□ -1.82
SMAD4-216ENST00000593223 STXBP1P61764 594 aaKnown RBP3.69□□□□□ -1.82
SMAD4-216ENST00000593223 ESRRGP62508 458 aa3.69□□□□□ -1.82
SMAD4-216ENST00000593223 PSPHP78330 225 aa3.69□□□□□ -1.82
SMAD4-216ENST00000593223 GUSBP1Q15486 140 aa3.69□□□□□ -1.82
SMAD4-216ENST00000593223 ATP6AP1Q15904 470 aa3.69□□□□□ -1.82
SMAD4-216ENST00000593223 HIST3H3Q16695 136 aa3.69□□□□□ -1.82
SMAD4-216ENST00000593223 LRRC36Q1X8D7 754 aa3.69□□□□□ -1.82
SMAD4-216ENST00000593223 TIMM50Q3ZCQ8 353 aa3.69□□□□□ -1.82
SMAD4-216ENST00000593223 TIGITQ495A1 244 aa3.69□□□□□ -1.82
SMAD4-216ENST00000593223 C14orf28Q4W4Y0 310 aa3.69□□□□□ -1.82
SMAD4-216ENST00000593223 PYCR3Q53H96 274 aa3.69□□□□□ -1.82
SMAD4-216ENST00000593223 CARD16Q5EG05 197 aa3.69□□□□□ -1.82
SMAD4-216ENST00000593223 CT45A1Q5HYN5 189 aa3.69□□□□□ -1.82
SMAD4-216ENST00000593223 WDR25Q64LD2 544 aaPredicted RBP3.69□□□□□ -1.82
SMAD4-216ENST00000593223 WDR82Q6UXN9 313 aa3.69□□□□□ -1.82
SMAD4-216ENST00000593223 STAC2Q6ZMT1 411 aa3.69□□□□□ -1.82
SMAD4-216ENST00000593223 FAM19A1Q7Z5A9 133 aa3.69□□□□□ -1.82
SMAD4-216ENST00000593223 CPNE9Q8IYJ1 553 aa3.69□□□□□ -1.82
SMAD4-216ENST00000593223 SLC22A18ASQ8N1D0 253 aa3.69□□□□□ -1.82
SMAD4-216ENST00000593223 OR10A6Q8NH74 314 aa3.69□□□□□ -1.82
SMAD4-216ENST00000593223 CT45A3Q8NHU0 189 aa3.69□□□□□ -1.82
SMAD4-216ENST00000593223 TBCKQ8TEA7 893 aa3.69□□□□□ -1.82
SMAD4-216ENST00000593223 PYROXD1Q8WU10 500 aa3.69□□□□□ -1.82
SMAD4-216ENST00000593223 TCTEX1D2Q8WW35 142 aa3.69□□□□□ -1.82
SMAD4-216ENST00000593223 C12orf43Q96C57 262 aaKnown RBP3.69□□□□□ -1.82
SMAD4-216ENST00000593223 HSFY1Q96LI6 401 aa3.69□□□□□ -1.82
SMAD4-216ENST00000593223 GPR21Q99679 349 aa3.69□□□□□ -1.82
SMAD4-216ENST00000593223 AGMATQ9BSE5 352 aa3.69□□□□□ -1.82
SMAD4-216ENST00000593223 TMEM208Q9BTX3 173 aa3.69□□□□□ -1.82
SMAD4-216ENST00000593223 NUDT9Q9BW91 350 aa3.69□□□□□ -1.82
SMAD4-216ENST00000593223 TMEM59Q9BXS4 323 aa3.69□□□□□ -1.82
SMAD4-216ENST00000593223 UGT2B28Q9BY64 529 aa3.69□□□□□ -1.82
SMAD4-216ENST00000593223 CHIAQ9BZP6 476 aa3.69□□□□□ -1.82
SMAD4-216ENST00000593223 NAT10Q9H0A0 1025 aaKnown RBP3.69□□□□□ -1.82
SMAD4-216ENST00000593223 RBKSQ9H477 322 aa3.69□□□□□ -1.82
SMAD4-216ENST00000593223 ZNF385DQ9H6B1 395 aa3.69□□□□□ -1.82
SMAD4-216ENST00000593223 Q9HAA7 133 aa3.69□□□□□ -1.82
SMAD4-216ENST00000593223 SIAEQ9HAT2 523 aa3.69□□□□□ -1.82
SMAD4-216ENST00000593223 ACOT13Q9NPJ3 140 aa3.69□□□□□ -1.82
SMAD4-216ENST00000593223 ZNF446Q9NWS9 450 aa3.69□□□□□ -1.82
SMAD4-216ENST00000593223 WRAP73Q9P2S5 460 aaPredicted RBP3.69□□□□□ -1.82
SMAD4-216ENST00000593223 SNX10Q9Y5X0 201 aa3.69□□□□□ -1.82
SMAD4-216ENST00000593223 GREB1Q4ZG55 1949 aa3.68□□□□□ -1.82
SMAD4-216ENST00000593223 PLXNB3Q9ULL4 1909 aa3.68□□□□□ -1.82
SMAD4-216ENST00000593223 HIVEP1P15822 2718 aa3.68□□□□□ -1.82
SMAD4-216ENST00000593223 TINCRA0A1B0GVN0 87 aa3.68□□□□□ -1.82
SMAD4-216ENST00000593223 SMIM9A6NGZ8 99 aa3.68□□□□□ -1.82
SMAD4-216ENST00000593223 METTL15A6NJ78 407 aa3.68□□□□□ -1.82
SMAD4-216ENST00000593223 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.68□□□□□ -1.82
SMAD4-216ENST00000593223 CCL21O00585 134 aa3.68□□□□□ -1.82
SMAD4-216ENST00000593223 BHLHE40O14503 412 aa3.68□□□□□ -1.82
SMAD4-216ENST00000593223 TCAPO15273 167 aa3.68□□□□□ -1.82
SMAD4-216ENST00000593223 ERI3O43414 337 aaKnown RBP3.68□□□□□ -1.82
SMAD4-216ENST00000593223 CHP2O43745 196 aa3.68□□□□□ -1.82
SMAD4-216ENST00000593223 PRKYO43930 277 aa3.68□□□□□ -1.82
SMAD4-216ENST00000593223 UGT2B11O75310 529 aa3.68□□□□□ -1.82
SMAD4-216ENST00000593223 CLIC3O95833 236 aa3.68□□□□□ -1.82
SMAD4-216ENST00000593223 SLC25A27O95847 323 aa3.68□□□□□ -1.82
SMAD4-216ENST00000593223 CD74P04233 296 aa3.68□□□□□ -1.82
SMAD4-216ENST00000593223 ICAM2P13598 275 aa3.68□□□□□ -1.82
SMAD4-216ENST00000593223 ADRB3P13945 408 aa3.68□□□□□ -1.82
SMAD4-216ENST00000593223 ADORA1P30542 326 aa3.68□□□□□ -1.82
SMAD4-216ENST00000593223 SAA4P35542 130 aa3.68□□□□□ -1.82
SMAD4-216ENST00000593223 RPL5P46777 297 aaKnown RBP3.68□□□□□ -1.82
SMAD4-216ENST00000593223 AQP5P55064 265 aa3.68□□□□□ -1.82
SMAD4-216ENST00000593223 VSX2P58304 361 aaPredicted RBP3.68□□□□□ -1.82
SMAD4-216ENST00000593223 CDC42P60953 191 aa3.68□□□□□ -1.82
SMAD4-216ENST00000593223 BTN3A2P78410 334 aa3.68□□□□□ -1.82
SMAD4-216ENST00000593223 ZNF45Q02386 682 aa3.68□□□□□ -1.82
SMAD4-216ENST00000593223 SP4Q02446 784 aa3.68□□□□□ -1.82
SMAD4-216ENST00000593223 TGFBR3Q03167 851 aa3.68□□□□□ -1.82
SMAD4-216ENST00000593223 BCL2L1Q07817 233 aa3.68□□□□□ -1.82
SMAD4-216ENST00000593223 TFDP2Q14188 446 aa3.68□□□□□ -1.82
SMAD4-216ENST00000593223 TRAM1Q15629 374 aa3.68□□□□□ -1.82
SMAD4-216ENST00000593223 TSNQ15631 228 aaKnown RBP3.68□□□□□ -1.82
SMAD4-216ENST00000593223 HIST2H3PS2Q5TEC6 136 aa3.68□□□□□ -1.82
SMAD4-216ENST00000593223 HBMQ6B0K9 141 aa3.68□□□□□ -1.82
SMAD4-216ENST00000593223 FAM71E1Q6IPT2 247 aa3.68□□□□□ -1.82
SMAD4-216ENST00000593223 ZFP1Q6P2D0 407 aa3.68□□□□□ -1.82
SMAD4-216ENST00000593223 TRIM40Q6P9F5 258 aa3.68□□□□□ -1.82
SMAD4-216ENST00000593223 CASP12Q6UXS9 341 aa3.68□□□□□ -1.82
SMAD4-216ENST00000593223 FAM220AQ7Z4H9 259 aa3.68□□□□□ -1.82
SMAD4-216ENST00000593223 FAM19A5Q7Z5A7 132 aaPredicted RBP3.68□□□□□ -1.82
SMAD4-216ENST00000593223 LRRC25Q8N386 305 aaPredicted RBP3.68□□□□□ -1.82
SMAD4-216ENST00000593223 BPIFB2Q8N4F0 458 aa3.68□□□□□ -1.82
SMAD4-216ENST00000593223 PRELID2Q8N945 189 aa3.68□□□□□ -1.82
SMAD4-216ENST00000593223 KLHL30-AS1Q8NEE0 82 aa3.68□□□□□ -1.82
SMAD4-216ENST00000593223 OR5B3Q8NH48 314 aa3.68□□□□□ -1.82
SMAD4-216ENST00000593223 ZNF502Q8TBZ5 544 aa3.68□□□□□ -1.82
SMAD4-216ENST00000593223 RNF138Q8WVD3 245 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms