RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 IRF3Q14653 427 aa7.5□□□□□ -1.21
DNMT1-223ENST00000591239 MED22Q15528 200 aa7.5□□□□□ -1.21
DNMT1-223ENST00000591239 LINC01559Q495D7 138 aa7.5□□□□□ -1.21
DNMT1-223ENST00000591239 MIDNQ504T8 468 aa7.5□□□□□ -1.21
DNMT1-223ENST00000591239 C12orf54Q6X4T0 127 aa7.5□□□□□ -1.21
DNMT1-223ENST00000591239 ASCL4Q6XD76 172 aa7.5□□□□□ -1.21
DNMT1-223ENST00000591239 TCF23Q7RTU1 214 aa7.5□□□□□ -1.21
DNMT1-223ENST00000591239 LDLRAD3Q86YD5 345 aa7.5□□□□□ -1.21
DNMT1-223ENST00000591239 TMEM86BQ8N661 226 aa7.5□□□□□ -1.21
DNMT1-223ENST00000591239 CHST4Q8NCG5 386 aa7.5□□□□□ -1.21
DNMT1-223ENST00000591239 Q8NFD4 153 aa7.5□□□□□ -1.21
DNMT1-223ENST00000591239 OR51T1Q8NGJ9 327 aa7.5□□□□□ -1.21
DNMT1-223ENST00000591239 ZNF714Q96N38 554 aa7.5□□□□□ -1.21
DNMT1-223ENST00000591239 ZNF184Q99676 751 aaPredicted RBP7.5□□□□□ -1.21
DNMT1-223ENST00000591239 CHIAQ9BZP6 476 aa7.5□□□□□ -1.21
DNMT1-223ENST00000591239 METTL9Q9H1A3 318 aa7.5□□□□□ -1.21
DNMT1-223ENST00000591239 PPA2Q9H2U2 334 aa7.5□□□□□ -1.21
DNMT1-223ENST00000591239 RAB26Q9ULW5 256 aa7.5□□□□□ -1.21
DNMT1-223ENST00000591239 ING4Q9UNL4 249 aa7.5□□□□□ -1.21
DNMT1-223ENST00000591239 POMT1Q9Y6A1 747 aa7.5□□□□□ -1.21
DNMT1-223ENST00000591239 LINC00312Q9Y6C7 94 aa7.5□□□□□ -1.21
DNMT1-223ENST00000591239 DSCAML1Q8TD84 2053 aa7.5□□□□□ -1.21
DNMT1-223ENST00000591239 FUOMA2VDF0 154 aa7.49□□□□□ -1.21
DNMT1-223ENST00000591239 FAM181BA6NEQ2 426 aa7.49□□□□□ -1.21
DNMT1-223ENST00000591239 PIN1P1O15428 100 aa7.49□□□□□ -1.21
DNMT1-223ENST00000591239 HTR3BO95264 441 aa7.49□□□□□ -1.21
DNMT1-223ENST00000591239 PAHP00439 452 aa7.49□□□□□ -1.21
DNMT1-223ENST00000591239 IGHV4-59P01825 116 aa7.49□□□□□ -1.21
DNMT1-223ENST00000591239 CSTBP04080 98 aaKnown RBP7.49□□□□□ -1.21
DNMT1-223ENST00000591239 MAS1P04201 325 aa7.49□□□□□ -1.21
DNMT1-223ENST00000591239 CSN2P05814 226 aa7.49□□□□□ -1.21
DNMT1-223ENST00000591239 IGHV1-8P0DP01 117 aa7.49□□□□□ -1.21
DNMT1-223ENST00000591239 MAPK3P27361 379 aaPredicted RBP7.49□□□□□ -1.21
DNMT1-223ENST00000591239 GLIPR1P48060 266 aa7.49□□□□□ -1.21
DNMT1-223ENST00000591239 P2RX3P56373 397 aa7.49□□□□□ -1.21
DNMT1-223ENST00000591239 AESQ08117 197 aa7.49□□□□□ -1.21
DNMT1-223ENST00000591239 GPR50Q13585 617 aa7.49□□□□□ -1.21
DNMT1-223ENST00000591239 INSL4Q14641 139 aa7.49□□□□□ -1.21
DNMT1-223ENST00000591239 PIGYQ3MUY2 71 aa7.49□□□□□ -1.21
DNMT1-223ENST00000591239 ACSM3Q53FZ2 586 aa7.49□□□□□ -1.21
DNMT1-223ENST00000591239 RBM48Q5RL73 367 aaKnown RBP7.49□□□□□ -1.21
DNMT1-223ENST00000591239 UNQ9370/PRO34162Q6UXP9 181 aa7.49□□□□□ -1.21
DNMT1-223ENST00000591239 ZNF782Q6ZMW2 699 aaPredicted RBP7.49□□□□□ -1.21
DNMT1-223ENST00000591239 PRSS48Q7RTY5 328 aa7.49□□□□□ -1.21
DNMT1-223ENST00000591239 MS4A15Q8N5U1 240 aa7.49□□□□□ -1.21
DNMT1-223ENST00000591239 C17orf50Q8WW18 174 aa7.49□□□□□ -1.21
DNMT1-223ENST00000591239 THRSPQ92748 146 aa7.49□□□□□ -1.21
DNMT1-223ENST00000591239 S100A13Q99584 98 aa7.49□□□□□ -1.21
DNMT1-223ENST00000591239 TMED9Q9BVK6 235 aa7.49□□□□□ -1.21
DNMT1-223ENST00000591239 CCDC90BQ9GZT6 254 aa7.49□□□□□ -1.21
DNMT1-223ENST00000591239 DPAGT1Q9H3H5 408 aa7.49□□□□□ -1.21
DNMT1-223ENST00000591239 IL36GQ9NZH8 169 aa7.49□□□□□ -1.21
DNMT1-223ENST00000591239 ZNRD1Q9P1U0 126 aa7.49□□□□□ -1.21
DNMT1-223ENST00000591239 FOXJ3Q9UPW0 622 aa7.49□□□□□ -1.21
DNMT1-223ENST00000591239 TRGV10A0A0A0MS01 117 aa7.48□□□□□ -1.21
DNMT1-223ENST00000591239 TRAV24A0A0B4J272 114 aa7.48□□□□□ -1.21
DNMT1-223ENST00000591239 HSPB6O14558 160 aa7.48□□□□□ -1.21
DNMT1-223ENST00000591239 ZNF780AO75290 641 aaPredicted RBP7.48□□□□□ -1.21
DNMT1-223ENST00000591239 HSMCR30P0CW71 290 aa7.48□□□□□ -1.21
DNMT1-223ENST00000591239 SERPINA2P20848 420 aa7.48□□□□□ -1.21
DNMT1-223ENST00000591239 COX7A1P24310 79 aa7.48□□□□□ -1.21
DNMT1-223ENST00000591239 LGALS4P56470 323 aa7.48□□□□□ -1.21
DNMT1-223ENST00000591239 FOXL1Q12952 345 aa7.48□□□□□ -1.21
DNMT1-223ENST00000591239 IL13RA2Q14627 380 aa7.48□□□□□ -1.21
DNMT1-223ENST00000591239 ATXN7L3Q14CW9 347 aaPredicted RBP7.48□□□□□ -1.21
DNMT1-223ENST00000591239 SLC22A6Q4U2R8 563 aa7.48□□□□□ -1.21
DNMT1-223ENST00000591239 PAN3Q58A45 887 aaKnown RBP7.48□□□□□ -1.21
DNMT1-223ENST00000591239 AWAT1Q58HT5 328 aa7.48□□□□□ -1.21
DNMT1-223ENST00000591239 NHLRC3Q5JS37 347 aa7.48□□□□□ -1.21
DNMT1-223ENST00000591239 KRBOX4Q5JUW0 171 aa7.48□□□□□ -1.21
DNMT1-223ENST00000591239 FAM27D1Q5T7N8 215 aa7.48□□□□□ -1.21
DNMT1-223ENST00000591239 LIPKQ5VXJ0 399 aa7.48□□□□□ -1.21
DNMT1-223ENST00000591239 TRAPPC6BQ86SZ2 158 aa7.48□□□□□ -1.21
DNMT1-223ENST00000591239 CDH26Q8IXH8 852 aa7.48□□□□□ -1.21
DNMT1-223ENST00000591239 OSR2Q8N2R0 312 aa7.48□□□□□ -1.21
DNMT1-223ENST00000591239 JAGN1Q8N5M9 183 aa7.48□□□□□ -1.21
DNMT1-223ENST00000591239 C3orf56Q8N813 242 aa7.48□□□□□ -1.21
DNMT1-223ENST00000591239 BEND2Q8NDZ0 799 aa7.48□□□□□ -1.21
DNMT1-223ENST00000591239 OR13D1Q8NGV5 346 aa7.48□□□□□ -1.21
DNMT1-223ENST00000591239 DYRK2Q92630 601 aa7.48□□□□□ -1.21
DNMT1-223ENST00000591239 TAF15Q92804 592 aaKnown RBP eCLIP7.48□□□□□ -1.21
DNMT1-223ENST00000591239 CORO2AQ92828 525 aa7.48□□□□□ -1.21
DNMT1-223ENST00000591239 COQ2Q96H96 371 aa7.48□□□□□ -1.21
DNMT1-223ENST00000591239 AJUBAQ96IF1 538 aa7.48□□□□□ -1.21
DNMT1-223ENST00000591239 ISYNA1Q9NPH2 558 aa7.48□□□□□ -1.21
DNMT1-223ENST00000591239 PCDHB16Q9NRJ7 776 aa7.48□□□□□ -1.21
DNMT1-223ENST00000591239 ING3Q9NXR8 418 aa7.48□□□□□ -1.21
DNMT1-223ENST00000591239 BLOC1S6Q9UL45 172 aa7.48□□□□□ -1.21
DNMT1-223ENST00000591239 ST3GAL6Q9Y274 331 aa7.48□□□□□ -1.21
DNMT1-223ENST00000591239 UBE2J1Q9Y385 318 aaPredicted RBP7.48□□□□□ -1.21
DNMT1-223ENST00000591239 ODAMA1E959 279 aa7.47□□□□□ -1.21
DNMT1-223ENST00000591239 MEGF11A6BM72 1044 aa7.47□□□□□ -1.21
DNMT1-223ENST00000591239 BTBD17A6NE02 478 aa7.47□□□□□ -1.21
DNMT1-223ENST00000591239 SC5DO75845 299 aa7.47□□□□□ -1.21
DNMT1-223ENST00000591239 MMP23AO75900 390 aa7.47□□□□□ -1.21
DNMT1-223ENST00000591239 CLPXO76031 633 aa7.47□□□□□ -1.21
DNMT1-223ENST00000591239 ARG1P05089 322 aa7.47□□□□□ -1.21
DNMT1-223ENST00000591239 CRYBA1P05813 215 aa7.47□□□□□ -1.21
DNMT1-223ENST00000591239 GTF2F2P13984 249 aa7.47□□□□□ -1.21
DNMT1-223ENST00000591239 CFPP27918 469 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms