RNA–Protein interactions for RNA: ENST00000588642.1

NLE1-205, Transcript of notchless homolog 1, humanhuman

TSL 2

Gene NLE1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-205ENST00000588642 SMIM4Q8WVI0 70 aa11.75□□□□□ -0.53
NLE1-205ENST00000588642 CMSS1Q9BQ75 279 aaKnown RBP11.75□□□□□ -0.53
NLE1-205ENST00000588642 ZNF665Q9H7R5 613 aa11.75□□□□□ -0.53
NLE1-205ENST00000588642 CHODLQ9H9P2 273 aa11.75□□□□□ -0.53
NLE1-205ENST00000588642 TMEM165Q9HC07 324 aa11.75□□□□□ -0.53
NLE1-205ENST00000588642 ABCB10Q9NRK6 738 aa11.75□□□□□ -0.53
NLE1-205ENST00000588642 ETAA1Q9NY74 926 aa11.75□□□□□ -0.53
NLE1-205ENST00000588642 AK3Q9UIJ7 227 aa11.75□□□□□ -0.53
NLE1-205ENST00000588642 METRNQ9UJH8 293 aa11.75□□□□□ -0.53
NLE1-205ENST00000588642 ZNF222Q9UK12 451 aa11.75□□□□□ -0.53
NLE1-205ENST00000588642 EDARQ9UNE0 448 aa11.75□□□□□ -0.53
NLE1-205ENST00000588642 TMEM82A0PJX8 343 aa11.74□□□□□ -0.53
NLE1-205ENST00000588642 ISPDA4D126 451 aa11.74□□□□□ -0.53
NLE1-205ENST00000588642 MEIS3P1A6NDR6 274 aa11.74□□□□□ -0.53
NLE1-205ENST00000588642 SSX4O60224 188 aa11.74□□□□□ -0.53
NLE1-205ENST00000588642 CA11O75493 328 aa11.74□□□□□ -0.53
NLE1-205ENST00000588642 LPLP06858 475 aa11.74□□□□□ -0.53
NLE1-205ENST00000588642 CSF3P09919 207 aa11.74□□□□□ -0.53
NLE1-205ENST00000588642 MDH2P40926 338 aaKnown RBP11.74□□□□□ -0.53
NLE1-205ENST00000588642 ATP5J2P56134 94 aa11.74□□□□□ -0.53
NLE1-205ENST00000588642 DCDC5Q6ZRR9 648 aa11.74□□□□□ -0.53
NLE1-205ENST00000588642 GPX8Q8TED1 209 aa11.74□□□□□ -0.53
NLE1-205ENST00000588642 DYRK2Q92630 601 aa11.74□□□□□ -0.53
NLE1-205ENST00000588642 SDSLQ96GA7 329 aa11.74□□□□□ -0.53
NLE1-205ENST00000588642 MED30Q96HR3 178 aa11.74□□□□□ -0.53
NLE1-205ENST00000588642 CHST6Q9GZX3 395 aa11.74□□□□□ -0.53
NLE1-205ENST00000588642 PPA2Q9H2U2 334 aa11.74□□□□□ -0.53
NLE1-205ENST00000588642 BARX1Q9HBU1 254 aaPredicted RBP11.74□□□□□ -0.53
NLE1-205ENST00000588642 CHMP1AQ9HD42 196 aaPredicted RBP11.74□□□□□ -0.53
NLE1-205ENST00000588642 ZNF701Q9NV72 531 aaPredicted RBP11.74□□□□□ -0.53
NLE1-205ENST00000588642 ING3Q9NXR8 418 aa11.74□□□□□ -0.53
NLE1-205ENST00000588642 NDUFA2O43678 99 aa11.73□□□□□ -0.53
NLE1-205ENST00000588642 SSX5O60225 188 aa11.73□□□□□ -0.53
NLE1-205ENST00000588642 PSPNO60542 156 aa11.73□□□□□ -0.53
NLE1-205ENST00000588642 UPK1BO75841 260 aa11.73□□□□□ -0.53
NLE1-205ENST00000588642 IGHV2-70P01814 119 aa11.73□□□□□ -0.53
NLE1-205ENST00000588642 FCER2P06734 321 aa11.73□□□□□ -0.53
NLE1-205ENST00000588642 IL7P13232 177 aa11.73□□□□□ -0.53
NLE1-205ENST00000588642 AMY2BP19961 511 aa11.73□□□□□ -0.53
NLE1-205ENST00000588642 CBX5P45973 191 aa11.73□□□□□ -0.53
NLE1-205ENST00000588642 LRBAP50851 2863 aa11.73□□□□□ -0.53
NLE1-205ENST00000588642 IL13RA1P78552 427 aa11.73□□□□□ -0.53
NLE1-205ENST00000588642 CACNA1DQ01668 2161 aa11.73□□□□□ -0.53
NLE1-205ENST00000588642 DCTN2Q13561 401 aaKnown RBP11.73□□□□□ -0.53
NLE1-205ENST00000588642 GRK1Q15835 563 aa11.73□□□□□ -0.53
NLE1-205ENST00000588642 ATPAF1Q5TC12 328 aaPredicted RBP11.73□□□□□ -0.53
NLE1-205ENST00000588642 ARFGEF3Q5TH69 2177 aa11.73□□□□□ -0.53
NLE1-205ENST00000588642 ZNF788Q6ZQV5 615 aa11.73□□□□□ -0.53
NLE1-205ENST00000588642 C17orf107Q6ZR85 190 aa11.73□□□□□ -0.53
NLE1-205ENST00000588642 MUC20Q8N307 709 aaPredicted RBP11.73□□□□□ -0.53
NLE1-205ENST00000588642 ZNF561Q8N587 486 aa11.73□□□□□ -0.53
NLE1-205ENST00000588642 OR4S1Q8NGB4 309 aa11.73□□□□□ -0.53
NLE1-205ENST00000588642 SNX22Q96L94 193 aa11.73□□□□□ -0.53
NLE1-205ENST00000588642 GAFA1Q96PS6 74 aa11.73□□□□□ -0.53
NLE1-205ENST00000588642 TMEM246Q9BRR3 403 aa11.73□□□□□ -0.53
NLE1-205ENST00000588642 HDHD3Q9BSH5 251 aaPredicted RBP11.73□□□□□ -0.53
NLE1-205ENST00000588642 IFT46Q9NQC8 304 aa11.73□□□□□ -0.53
NLE1-205ENST00000588642 KLK11Q9UBX7 282 aa11.73□□□□□ -0.53
NLE1-205ENST00000588642 MAB21L2Q9Y586 359 aa11.73□□□□□ -0.53
NLE1-205ENST00000588642 LINC00854A0A1B0GVQ3 168 aa11.72□□□□□ -0.53
NLE1-205ENST00000588642 SIGLEC5O15389 551 aa11.72□□□□□ -0.53
NLE1-205ENST00000588642 TMPRSS2O15393 492 aa11.72□□□□□ -0.53
NLE1-205ENST00000588642 ADAM20O43506 726 aa11.72□□□□□ -0.53
NLE1-205ENST00000588642 LANCL1O43813 399 aa11.72□□□□□ -0.53
NLE1-205ENST00000588642 ORC5O43913 435 aa11.72□□□□□ -0.53
NLE1-205ENST00000588642 ZNF737O75373 536 aa11.72□□□□□ -0.53
NLE1-205ENST00000588642 FSTL3O95633 263 aa11.72□□□□□ -0.53
NLE1-205ENST00000588642 GSTT2BP0CG30 244 aa11.72□□□□□ -0.53
NLE1-205ENST00000588642 DNASE1P24855 282 aa11.72□□□□□ -0.53
NLE1-205ENST00000588642 GDNFP39905 211 aa11.72□□□□□ -0.53
NLE1-205ENST00000588642 GPR6P46095 362 aaPredicted RBP11.72□□□□□ -0.53
NLE1-205ENST00000588642 OR3A1P47881 315 aa11.72□□□□□ -0.53
NLE1-205ENST00000588642 KCNJ3P48549 501 aa11.72□□□□□ -0.53
NLE1-205ENST00000588642 PDLIM4P50479 330 aa11.72□□□□□ -0.53
NLE1-205ENST00000588642 ATXN7L3Q14CW9 347 aaPredicted RBP11.72□□□□□ -0.53
NLE1-205ENST00000588642 ZNF57Q68EA5 555 aaPredicted RBP11.72□□□□□ -0.53
NLE1-205ENST00000588642 DNM1P46Q6ZS02 220 aa11.72□□□□□ -0.53
NLE1-205ENST00000588642 SLC36A1Q7Z2H8 476 aa11.72□□□□□ -0.53
NLE1-205ENST00000588642 ZNF525Q8N782 197 aa11.72□□□□□ -0.53
NLE1-205ENST00000588642 FAM216BQ8N7L0 139 aa11.72□□□□□ -0.53
NLE1-205ENST00000588642 ZNRF1Q8ND25 227 aa11.72□□□□□ -0.53
NLE1-205ENST00000588642 TMEM185AQ8NFB2 350 aa11.72□□□□□ -0.53
NLE1-205ENST00000588642 OR5D13Q8NGL4 314 aa11.72□□□□□ -0.53
NLE1-205ENST00000588642 SETD6Q8TBK2 473 aa11.72□□□□□ -0.53
NLE1-205ENST00000588642 PERPQ96FX8 193 aa11.72□□□□□ -0.53
NLE1-205ENST00000588642 OCSTAMPQ9BR26 566 aa11.72□□□□□ -0.53
NLE1-205ENST00000588642 ST6GALNAC5Q9BVH7 336 aa11.72□□□□□ -0.53
NLE1-205ENST00000588642 DNTTIP1Q9H147 329 aa11.72□□□□□ -0.53
NLE1-205ENST00000588642 RIMS4Q9H426 269 aaPredicted RBP11.72□□□□□ -0.53
NLE1-205ENST00000588642 C12orf4Q9NQ89 552 aa11.72□□□□□ -0.53
NLE1-205ENST00000588642 MTFP1Q9UDX5 166 aa11.72□□□□□ -0.53
NLE1-205ENST00000588642 RAI1Q7Z5J4 1906 aaPredicted RBP11.71□□□□□ -0.53
NLE1-205ENST00000588642 A0A1B0GW55 424 aa11.71□□□□□ -0.53
NLE1-205ENST00000588642 A0A1W2PQ09 198 aa11.71□□□□□ -0.53
NLE1-205ENST00000588642 K7N7A8 449 aa11.71□□□□□ -0.53
NLE1-205ENST00000588642 TNFRSF13BO14836 293 aaPredicted RBP11.71□□□□□ -0.53
NLE1-205ENST00000588642 MGST3O14880 152 aa11.71□□□□□ -0.53
NLE1-205ENST00000588642 TK1P04183 234 aa11.71□□□□□ -0.53
NLE1-205ENST00000588642 DUX4L2P0CJ85 424 aa11.71□□□□□ -0.53
NLE1-205ENST00000588642 DUX4L3P0CJ86 424 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms