RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 SUMF2Q8NBJ7 301 aa18.91■□□□□ 0.62
ACTN4-210ENST00000588618 CCL13Q99616 98 aa18.91■□□□□ 0.62
ACTN4-210ENST00000588618 TMEM246Q9BRR3 403 aa18.91■□□□□ 0.62
ACTN4-210ENST00000588618 PIMREGQ9BSJ6 248 aa18.91■□□□□ 0.62
ACTN4-210ENST00000588618 DPCDQ9BVM2 203 aaPredicted RBP18.91■□□□□ 0.62
ACTN4-210ENST00000588618 METRNQ9UJH8 293 aa18.91■□□□□ 0.62
ACTN4-210ENST00000588618 HSF4Q9ULV5 492 aa18.91■□□□□ 0.62
ACTN4-210ENST00000588618 SLC33A1O00400 549 aaPredicted RBP18.9■□□□□ 0.62
ACTN4-210ENST00000588618 DSCR9P59020 149 aa18.9■□□□□ 0.62
ACTN4-210ENST00000588618 IL13RA1P78552 427 aa18.9■□□□□ 0.62
ACTN4-210ENST00000588618 ZNF45Q02386 682 aa18.9■□□□□ 0.62
ACTN4-210ENST00000588618 PYHIN1Q6K0P9 492 aa18.9■□□□□ 0.62
ACTN4-210ENST00000588618 DCDC5Q6ZRR9 648 aa18.9■□□□□ 0.62
ACTN4-210ENST00000588618 SPICQ8N5J4 248 aa18.9■□□□□ 0.62
ACTN4-210ENST00000588618 MED30Q96HR3 178 aa18.9■□□□□ 0.62
ACTN4-210ENST00000588618 SDHCQ99643 169 aaPredicted RBP18.9■□□□□ 0.62
ACTN4-210ENST00000588618 PECRQ9BY49 303 aa18.9■□□□□ 0.62
ACTN4-210ENST00000588618 SEBOXQ9HB31 216 aaPredicted RBP18.9■□□□□ 0.62
ACTN4-210ENST00000588618 RCC2Q9P258 522 aaKnown RBP18.9■□□□□ 0.62
ACTN4-210ENST00000588618 ZNF222Q9UK12 451 aa18.9■□□□□ 0.62
ACTN4-210ENST00000588618 PCDHB10Q9UN67 800 aa18.9■□□□□ 0.62
ACTN4-210ENST00000588618 NAV2Q8IVL1 2488 aa18.89■□□□□ 0.62
ACTN4-210ENST00000588618 TRAV24A0A0B4J272 114 aa18.89■□□□□ 0.61
ACTN4-210ENST00000588618 SERPINE3A8MV23 424 aa18.89■□□□□ 0.61
ACTN4-210ENST00000588618 NDUFS8O00217 210 aa18.89■□□□□ 0.61
ACTN4-210ENST00000588618 ADAM20O43506 726 aa18.89■□□□□ 0.61
ACTN4-210ENST00000588618 LMO1P25800 156 aa18.89■□□□□ 0.61
ACTN4-210ENST00000588618 ZNF260Q3ZCT1 412 aa18.89■□□□□ 0.61
ACTN4-210ENST00000588618 LRRC75A-AS1Q8N1F1 130 aa18.89■□□□□ 0.61
ACTN4-210ENST00000588618 BPIFB2Q8N4F0 458 aa18.89■□□□□ 0.61
ACTN4-210ENST00000588618 MFNGO00587 321 aa18.88■□□□□ 0.61
ACTN4-210ENST00000588618 TPPPO94811 219 aa18.88■□□□□ 0.61
ACTN4-210ENST00000588618 GSTP1P09211 210 aaKnown RBP18.88■□□□□ 0.61
ACTN4-210ENST00000588618 ARFRP1Q13795 201 aa18.88■□□□□ 0.61
ACTN4-210ENST00000588618 TMEM155Q4W5P6 130 aa18.88■□□□□ 0.61
ACTN4-210ENST00000588618 ATPAF1Q5TC12 328 aaPredicted RBP18.88■□□□□ 0.61
ACTN4-210ENST00000588618 ZNF788Q6ZQV5 615 aa18.88■□□□□ 0.61
ACTN4-210ENST00000588618 TMEM185AQ8NFB2 350 aa18.88■□□□□ 0.61
ACTN4-210ENST00000588618 MBD6Q96DN6 1003 aa18.88■□□□□ 0.61
ACTN4-210ENST00000588618 SDSLQ96GA7 329 aa18.88■□□□□ 0.61
ACTN4-210ENST00000588618 FAAP24Q9BTP7 215 aa18.88■□□□□ 0.61
ACTN4-210ENST00000588618 WDR12Q9GZL7 423 aaKnown RBP18.88■□□□□ 0.61
ACTN4-210ENST00000588618 CHST6Q9GZX3 395 aa18.88■□□□□ 0.61
ACTN4-210ENST00000588618 PPA2Q9H2U2 334 aa18.88■□□□□ 0.61
ACTN4-210ENST00000588618 UBE2QL1A1L167 161 aa18.88■□□□□ 0.61
ACTN4-210ENST00000588618 TMEM235A6NFC5 223 aa18.88■□□□□ 0.61
ACTN4-210ENST00000588618 GLAP06280 429 aa18.88■□□□□ 0.61
ACTN4-210ENST00000588618 PTBP1P26599 531 aaKnown RBP eCLIP18.88■□□□□ 0.612e-6■■■□□ 17.1
ACTN4-210ENST00000588618 GIFP27352 417 aa18.88■□□□□ 0.61
ACTN4-210ENST00000588618 GNG2P59768 71 aa18.88■□□□□ 0.61
ACTN4-210ENST00000588618 PYDC2Q56P42 97 aa18.88■□□□□ 0.61
ACTN4-210ENST00000588618 NLRC3Q7RTR2 1065 aa18.88■□□□□ 0.61
ACTN4-210ENST00000588618 ZNRF1Q8ND25 227 aa18.88■□□□□ 0.61
ACTN4-210ENST00000588618 SNX22Q96L94 193 aa18.88■□□□□ 0.61
ACTN4-210ENST00000588618 SULT4A1Q9BR01 284 aa18.88■□□□□ 0.61
ACTN4-210ENST00000588618 BPESC1Q9GZL8 116 aa18.88■□□□□ 0.61
ACTN4-210ENST00000588618 SRRQ9GZT4 340 aa18.88■□□□□ 0.61
ACTN4-210ENST00000588618 AUNIPQ9H7T9 357 aa18.88■□□□□ 0.61
ACTN4-210ENST00000588618 A0A1B0GW55 424 aa18.87■□□□□ 0.61
ACTN4-210ENST00000588618 J3QRK9 145 aa18.87■□□□□ 0.61
ACTN4-210ENST00000588618 SIGLEC5O15389 551 aa18.87■□□□□ 0.61
ACTN4-210ENST00000588618 DUX4L2P0CJ85 424 aa18.87■□□□□ 0.61
ACTN4-210ENST00000588618 DUX4L3P0CJ86 424 aa18.87■□□□□ 0.61
ACTN4-210ENST00000588618 DUX4L4P0CJ87 422 aa18.87■□□□□ 0.61
ACTN4-210ENST00000588618 DUX4L5P0CJ88 424 aa18.87■□□□□ 0.61
ACTN4-210ENST00000588618 DUX4L6P0CJ89 424 aa18.87■□□□□ 0.61
ACTN4-210ENST00000588618 DUX4L7P0CJ90 424 aa18.87■□□□□ 0.61
ACTN4-210ENST00000588618 RPS2P15880 293 aaKnown RBP18.87■□□□□ 0.61
ACTN4-210ENST00000588618 GRK1Q15835 563 aa18.87■□□□□ 0.61
ACTN4-210ENST00000588618 DUX4L9Q6RFH8 374 aaPredicted RBP18.87■□□□□ 0.61
ACTN4-210ENST00000588618 FAM216BQ8N7L0 139 aa18.87■□□□□ 0.61
ACTN4-210ENST00000588618 ST8SIA4Q92187 359 aa18.87■□□□□ 0.61
ACTN4-210ENST00000588618 DYRK2Q92630 601 aa18.87■□□□□ 0.61
ACTN4-210ENST00000588618 GAFA1Q96PS6 74 aa18.87■□□□□ 0.61
ACTN4-210ENST00000588618 NARFLQ9H6Q4 476 aa18.87■□□□□ 0.61
ACTN4-210ENST00000588618 ETAA1Q9NY74 926 aa18.87■□□□□ 0.61
ACTN4-210ENST00000588618 DUX4Q9UBX2 424 aa18.87■□□□□ 0.61
ACTN4-210ENST00000588618 MIOXQ9UGB7 285 aa18.87■□□□□ 0.61
ACTN4-210ENST00000588618 MAB21L2Q9Y586 359 aa18.87■□□□□ 0.61
ACTN4-210ENST00000588618 MEIOCA2RUB1 952 aa18.86■□□□□ 0.61
ACTN4-210ENST00000588618 CEACAM18A8MTB9 384 aa18.86■□□□□ 0.61
ACTN4-210ENST00000588618 PSPNO60542 156 aa18.86■□□□□ 0.61
ACTN4-210ENST00000588618 CD3GP09693 182 aa18.86■□□□□ 0.61
ACTN4-210ENST00000588618 KCNJ3P48549 501 aa18.86■□□□□ 0.61
ACTN4-210ENST00000588618 PNLIPRP3Q17RR3 467 aa18.86■□□□□ 0.61
ACTN4-210ENST00000588618 HACD4Q5VWC8 232 aa18.86■□□□□ 0.61
ACTN4-210ENST00000588618 OR5D13Q8NGL4 314 aa18.86■□□□□ 0.61
ACTN4-210ENST00000588618 NDUFB3O43676 98 aa18.86■□□□□ 0.61
ACTN4-210ENST00000588618 PRSS3P35030 304 aa18.86■□□□□ 0.61
ACTN4-210ENST00000588618 MRPS10P82664 201 aaKnown RBP18.86■□□□□ 0.61
ACTN4-210ENST00000588618 GUCA2AQ02747 115 aa18.86■□□□□ 0.61
ACTN4-210ENST00000588618 ZNF846Q147U1 533 aa18.86■□□□□ 0.61
ACTN4-210ENST00000588618 ATXN7L3Q14CW9 347 aaPredicted RBP18.86■□□□□ 0.61
ACTN4-210ENST00000588618 CLEC12BQ2HXU8 276 aa18.86■□□□□ 0.61
ACTN4-210ENST00000588618 LRRC10Q5BKY1 277 aa18.86■□□□□ 0.61
ACTN4-210ENST00000588618 C10orf105Q8TEF2 133 aa18.86■□□□□ 0.61
ACTN4-210ENST00000588618 CMSS1Q9BQ75 279 aaKnown RBP18.86■□□□□ 0.61
ACTN4-210ENST00000588618 FAM234AQ9H0X4 552 aa18.86■□□□□ 0.61
ACTN4-210ENST00000588618 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.86■□□□□ 0.61
ACTN4-210ENST00000588618 ING3Q9NXR8 418 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms