RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 JUNBP17275 347 aaPredicted RBP11.99□□□□□ -0.49
VAPA-209ENST00000585042 PRKACAP17612 351 aa11.99□□□□□ -0.49
VAPA-209ENST00000585042 BCL3P20749 454 aa11.99□□□□□ -0.49
VAPA-209ENST00000585042 DUSP1P28562 367 aa11.99□□□□□ -0.49
VAPA-209ENST00000585042 PRRX1P54821 245 aa11.99□□□□□ -0.49
VAPA-209ENST00000585042 TTC23Q5W5X9 447 aa11.99□□□□□ -0.49
VAPA-209ENST00000585042 CCDC144NLQ6NUI1 221 aa11.99□□□□□ -0.49
VAPA-209ENST00000585042 CHST4Q8NCG5 386 aa11.99□□□□□ -0.49
VAPA-209ENST00000585042 OR4X2Q8NGF9 303 aa11.99□□□□□ -0.49
VAPA-209ENST00000585042 OR2G2Q8NGZ5 317 aa11.99□□□□□ -0.49
VAPA-209ENST00000585042 ADAT3Q96EY9 351 aaPredicted RBP11.99□□□□□ -0.49
VAPA-209ENST00000585042 COMMD4Q9H0A8 199 aa11.99□□□□□ -0.49
VAPA-209ENST00000585042 NEK6Q9HC98 313 aa11.99□□□□□ -0.49
VAPA-209ENST00000585042 EXOSC4Q9NPD3 245 aaKnown RBP11.99□□□□□ -0.49
VAPA-209ENST00000585042 IL36RNQ9UBH0 155 aa11.99□□□□□ -0.49
VAPA-209ENST00000585042 GNG8Q9UK08 70 aa11.99□□□□□ -0.49
VAPA-209ENST00000585042 A0A087X0M5 115 aa11.98□□□□□ -0.49
VAPA-209ENST00000585042 A0A1B0GX30 115 aa11.98□□□□□ -0.49
VAPA-209ENST00000585042 ERICH4A6NGS2 130 aa11.98□□□□□ -0.49
VAPA-209ENST00000585042 CLIC3O95833 236 aa11.98□□□□□ -0.49
VAPA-209ENST00000585042 OR2H2O95918 312 aa11.98□□□□□ -0.49
VAPA-209ENST00000585042 IGLL1P15814 213 aa11.98□□□□□ -0.49
VAPA-209ENST00000585042 CDK2P24941 298 aa11.98□□□□□ -0.49
VAPA-209ENST00000585042 KIR3DL2P43630 455 aa11.98□□□□□ -0.49
VAPA-209ENST00000585042 POU3F4P49335 361 aa11.98□□□□□ -0.49
VAPA-209ENST00000585042 CCR9P51686 369 aa11.98□□□□□ -0.49
VAPA-209ENST00000585042 LRRC36Q1X8D7 754 aa11.98□□□□□ -0.49
VAPA-209ENST00000585042 TCTEX1D4Q5JR98 221 aa11.98□□□□□ -0.49
VAPA-209ENST00000585042 THNSL2Q86YJ6 484 aa11.98□□□□□ -0.49
VAPA-209ENST00000585042 RDH10Q8IZV5 341 aa11.98□□□□□ -0.49
VAPA-209ENST00000585042 OR4D6Q8NGJ1 314 aa11.98□□□□□ -0.49
VAPA-209ENST00000585042 RNF166Q96A37 237 aaPredicted RBP11.98□□□□□ -0.49
VAPA-209ENST00000585042 FGGYQ96C11 551 aa11.98□□□□□ -0.49
VAPA-209ENST00000585042 RNFT2Q96EX2 444 aa11.98□□□□□ -0.49
VAPA-209ENST00000585042 SLC25A33Q9BSK2 321 aa11.98□□□□□ -0.49
VAPA-209ENST00000585042 GPR61Q9BZJ8 451 aa11.98□□□□□ -0.49
VAPA-209ENST00000585042 PCDHB16Q9NRJ7 776 aa11.98□□□□□ -0.49
VAPA-209ENST00000585042 A0A1W2PRX2 142 aa11.97□□□□□ -0.49
VAPA-209ENST00000585042 E9PQ18 207 aa11.97□□□□□ -0.49
VAPA-209ENST00000585042 LY6LH3BQJ8 138 aa11.97□□□□□ -0.49
VAPA-209ENST00000585042 H3BSH0 61 aa11.97□□□□□ -0.49
VAPA-209ENST00000585042 BUB1B-PAK6H3BSN5 160 aa11.97□□□□□ -0.49
VAPA-209ENST00000585042 TOR1AO14656 332 aa11.97□□□□□ -0.49
VAPA-209ENST00000585042 KDM4BO94953 1096 aa11.97□□□□□ -0.49
VAPA-209ENST00000585042 PF4P02776 101 aa11.97□□□□□ -0.49
VAPA-209ENST00000585042 LPLP06858 475 aa11.97□□□□□ -0.49
VAPA-209ENST00000585042 ZNF20P17024 532 aa11.97□□□□□ -0.49
VAPA-209ENST00000585042 MNDAP41218 407 aa11.97□□□□□ -0.49
VAPA-209ENST00000585042 ZNF85Q03923 595 aa11.97□□□□□ -0.49
VAPA-209ENST00000585042 TMEM95Q3KNT9 176 aa11.97□□□□□ -0.49
VAPA-209ENST00000585042 ABCA11PQ4W5N1 156 aa11.97□□□□□ -0.49
VAPA-209ENST00000585042 SETD9Q8NE22 299 aa11.97□□□□□ -0.49
VAPA-209ENST00000585042 RHOXF1Q8NHV9 184 aa11.97□□□□□ -0.49
VAPA-209ENST00000585042 MYDGFQ969H8 173 aa11.97□□□□□ -0.49
VAPA-209ENST00000585042 OPALINQ96PE5 141 aa11.97□□□□□ -0.49
VAPA-209ENST00000585042 NCOR1P1Q9H4R4 102 aa11.97□□□□□ -0.49
VAPA-209ENST00000585042 FRRS1LQ9P0K9 344 aa11.97□□□□□ -0.49
VAPA-209ENST00000585042 GSTK1Q9Y2Q3 226 aa11.97□□□□□ -0.49
VAPA-209ENST00000585042 DAPL1A0PJW8 107 aa11.96□□□□□ -0.49
VAPA-209ENST00000585042 ODAMA1E959 279 aa11.96□□□□□ -0.49
VAPA-209ENST00000585042 ZNF729A6NN14 1252 aaPredicted RBP11.96□□□□□ -0.49
VAPA-209ENST00000585042 SIRPB1O00241 398 aa11.96□□□□□ -0.49
VAPA-209ENST00000585042 APOL3O95236 402 aa11.96□□□□□ -0.49
VAPA-209ENST00000585042 FADS2O95864 444 aaKnown RBP11.96□□□□□ -0.49
VAPA-209ENST00000585042 AMY1AP04745 511 aa11.96□□□□□ -0.49
VAPA-209ENST00000585042 AMY2AP04746 511 aa11.96□□□□□ -0.49
VAPA-209ENST00000585042 OCM2P0CE71 109 aa11.96□□□□□ -0.49
VAPA-209ENST00000585042 OCMP0CE72 109 aaPredicted RBP11.96□□□□□ -0.49
VAPA-209ENST00000585042 FAM106CPP0CH98 169 aa11.96□□□□□ -0.49
VAPA-209ENST00000585042 GLIPR1P48060 266 aa11.96□□□□□ -0.49
VAPA-209ENST00000585042 AESQ08117 197 aa11.96□□□□□ -0.49
VAPA-209ENST00000585042 HLA-DRB5Q30154 266 aa11.96□□□□□ -0.49
VAPA-209ENST00000585042 TP53I3Q53FA7 332 aa11.96□□□□□ -0.49
VAPA-209ENST00000585042 VAX1Q5SQQ9 334 aa11.96□□□□□ -0.49
VAPA-209ENST00000585042 TPTE2P1Q5T6R2 138 aa11.96□□□□□ -0.49
VAPA-209ENST00000585042 PRAMEF5Q5TYX0 476 aa11.96□□□□□ -0.49
VAPA-209ENST00000585042 LPCAT4Q643R3 524 aa11.96□□□□□ -0.49
VAPA-209ENST00000585042 DHRSXQ8N5I4 330 aa11.96□□□□□ -0.49
VAPA-209ENST00000585042 ACBD7Q8N6N7 88 aa11.96□□□□□ -0.49
VAPA-209ENST00000585042 ZNF565Q8N9K5 539 aa11.96□□□□□ -0.49
VAPA-209ENST00000585042 CYGBQ8WWM9 190 aa11.96□□□□□ -0.49
VAPA-209ENST00000585042 OR6C3Q9NZP0 311 aa11.96□□□□□ -0.49
VAPA-209ENST00000585042 RPL36Q9Y3U8 105 aaKnown RBP11.96□□□□□ -0.49
VAPA-209ENST00000585042 KIAA2026Q5HYC2 2103 aa11.95□□□□□ -0.5
VAPA-209ENST00000585042 IGKV1-12A0A0C4DH73 117 aa11.95□□□□□ -0.5
VAPA-209ENST00000585042 FAM90A18PA6NE21 464 aa11.95□□□□□ -0.5
VAPA-209ENST00000585042 FAM90A16PA6NEW6 464 aa11.95□□□□□ -0.5
VAPA-209ENST00000585042 FAM90A20PA6NIJ5 464 aa11.95□□□□□ -0.5
VAPA-209ENST00000585042 FAM90A9PA6NNJ1 464 aa11.95□□□□□ -0.5
VAPA-209ENST00000585042 FAM90A12PA8MX19 464 aa11.95□□□□□ -0.5
VAPA-209ENST00000585042 FAM90A5PA8MXJ8 464 aa11.95□□□□□ -0.5
VAPA-209ENST00000585042 H0YHG0 523 aa11.95□□□□□ -0.5
VAPA-209ENST00000585042 J3QRE1 110 aa11.95□□□□□ -0.5
VAPA-209ENST00000585042 MPIG6BO95866 241 aa11.95□□□□□ -0.5
VAPA-209ENST00000585042 IGKV1D-12P01611 117 aa11.95□□□□□ -0.5
VAPA-209ENST00000585042 FAM90A15PP0C7V4 464 aa11.95□□□□□ -0.5
VAPA-209ENST00000585042 FAM90A13PP0C7W8 464 aa11.95□□□□□ -0.5
VAPA-209ENST00000585042 FAM90A14PP0C7W9 464 aa11.95□□□□□ -0.5
VAPA-209ENST00000585042 FAM90A24PP0C7X0 464 aa11.95□□□□□ -0.5
VAPA-209ENST00000585042 DBTP11182 482 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms