RNA–Protein interactions for RNA: ENST00000584089.1

SKA2-210, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 4

Gene SKA2, Length 229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-210ENST00000584089 ZNF436Q9C0F3 470 aaPredicted RBP1.25□□□□□ -2.21
SKA2-210ENST00000584089 ZNF286AQ9HBT8 521 aa1.25□□□□□ -2.21
SKA2-210ENST00000584089 PSME2Q9UL46 239 aa1.25□□□□□ -2.21
SKA2-210ENST00000584089 OTOFQ9HC10 1997 aa1.25□□□□□ -2.21
SKA2-210ENST00000584089 SHANK3Q9BYB0 1731 aa1.24□□□□□ -2.21
SKA2-210ENST00000584089 OR5H14A6NHG9 310 aa1.24□□□□□ -2.21
SKA2-210ENST00000584089 S1PR2O95136 353 aa1.24□□□□□ -2.21
SKA2-210ENST00000584089 TPM2P07951 284 aa1.24□□□□□ -2.21
SKA2-210ENST00000584089 GABRA1P14867 456 aa1.24□□□□□ -2.21
SKA2-210ENST00000584089 ARR3P36575 388 aa1.24□□□□□ -2.21
SKA2-210ENST00000584089 PSG4Q00888 419 aa1.24□□□□□ -2.21
SKA2-210ENST00000584089 DOC2AQ14183 400 aa1.24□□□□□ -2.21
SKA2-210ENST00000584089 NDUFAF6Q330K2 333 aa1.24□□□□□ -2.21
SKA2-210ENST00000584089 SPIN4Q56A73 249 aa1.24□□□□□ -2.21
SKA2-210ENST00000584089 TPGS1Q6ZTW0 290 aa1.24□□□□□ -2.21
SKA2-210ENST00000584089 GAPTQ8N292 157 aa1.24□□□□□ -2.21
SKA2-210ENST00000584089 OR51L1Q8NGJ5 315 aa1.24□□□□□ -2.21
SKA2-210ENST00000584089 TWIST2Q8WVJ9 160 aa1.24□□□□□ -2.21
SKA2-210ENST00000584089 CCL17Q92583 94 aa1.24□□□□□ -2.21
SKA2-210ENST00000584089 OLFM3Q96PB7 478 aa1.24□□□□□ -2.21
SKA2-210ENST00000584089 YLPM1P49750 1951 aaKnown RBP1.24□□□□□ -2.21
SKA2-210ENST00000584089 POLR3AO14802 1390 aaPredicted RBP1.23□□□□□ -2.21
SKA2-210ENST00000584089 ADAMTS7Q9UKP4 1686 aa1.23□□□□□ -2.21
SKA2-210ENST00000584089 KMT2BQ9UMN6 2715 aaPredicted RBP1.23□□□□□ -2.21
SKA2-210ENST00000584089 LY6LH3BQJ8 138 aa1.23□□□□□ -2.21
SKA2-210ENST00000584089 TP53I11O14683 189 aa1.23□□□□□ -2.21
SKA2-210ENST00000584089 SH2D1AO60880 128 aa1.23□□□□□ -2.21
SKA2-210ENST00000584089 POP7O75817 140 aaKnown RBP1.23□□□□□ -2.21
SKA2-210ENST00000584089 PSKH1P11801 424 aa1.23□□□□□ -2.21
SKA2-210ENST00000584089 PRKACAP17612 351 aa1.23□□□□□ -2.21
SKA2-210ENST00000584089 COILP38432 576 aaPredicted RBP1.23□□□□□ -2.21
SKA2-210ENST00000584089 XKP51811 444 aa1.23□□□□□ -2.21
SKA2-210ENST00000584089 FOXF1Q12946 379 aa1.23□□□□□ -2.21
SKA2-210ENST00000584089 ZCWPW2Q504Y3 356 aa1.23□□□□□ -2.21
SKA2-210ENST00000584089 ASCL4Q6XD76 172 aa1.23□□□□□ -2.21
SKA2-210ENST00000584089 ZNF767PQ75MW2 155 aa1.23□□□□□ -2.21
SKA2-210ENST00000584089 MARCH3Q86UD3 253 aa1.23□□□□□ -2.21
SKA2-210ENST00000584089 FAM131CQ96AQ9 280 aa1.23□□□□□ -2.21
SKA2-210ENST00000584089 CMBLQ96DG6 245 aa1.23□□□□□ -2.21
SKA2-210ENST00000584089 FMC1Q96HJ9 113 aa1.23□□□□□ -2.21
SKA2-210ENST00000584089 ULBP1Q9BZM6 244 aa1.23□□□□□ -2.21
SKA2-210ENST00000584089 MFSD1Q9H3U5 465 aa1.23□□□□□ -2.21
SKA2-210ENST00000584089 DNAJC27Q9NZQ0 273 aa1.23□□□□□ -2.21
SKA2-210ENST00000584089 HSPE1-MOB4S4R3N1 261 aa1.23□□□□□ -2.21
SKA2-210ENST00000584089 DOCK10Q96BY6 2186 aa1.23□□□□□ -2.21
SKA2-210ENST00000584089 MPDZO75970 2070 aa1.22□□□□□ -2.21
SKA2-210ENST00000584089 ATG2BQ96BY7 2078 aa1.22□□□□□ -2.21
SKA2-210ENST00000584089 CEP170Q5SW79 1584 aa1.22□□□□□ -2.21
SKA2-210ENST00000584089 IGHV1-45A0A0A0MS14 117 aa1.22□□□□□ -2.21
SKA2-210ENST00000584089 PGPA6NDG6 321 aa1.22□□□□□ -2.21
SKA2-210ENST00000584089 GMDSO60547 372 aa1.22□□□□□ -2.21
SKA2-210ENST00000584089 GUSBP08236 651 aa1.22□□□□□ -2.21
SKA2-210ENST00000584089 SFTPCP11686 197 aa1.22□□□□□ -2.21
SKA2-210ENST00000584089 PSMB9P28065 219 aa1.22□□□□□ -2.21
SKA2-210ENST00000584089 GOLGA7BQ2TAP0 167 aa1.22□□□□□ -2.21
SKA2-210ENST00000584089 C16orf87Q6PH81 154 aa1.22□□□□□ -2.21
SKA2-210ENST00000584089 TCF23Q7RTU1 214 aa1.22□□□□□ -2.21
SKA2-210ENST00000584089 RBM45Q8IUH3 476 aaKnown RBP1.22□□□□□ -2.21
SKA2-210ENST00000584089 ATPAF2Q8N5M1 289 aa1.22□□□□□ -2.21
SKA2-210ENST00000584089 RNASE11Q8TAA1 199 aaKnown RBP1.22□□□□□ -2.21
SKA2-210ENST00000584089 DOK4Q8TEW6 326 aa1.22□□□□□ -2.21
SKA2-210ENST00000584089 BLNKQ8WV28 456 aa1.22□□□□□ -2.21
SKA2-210ENST00000584089 TOP1MTQ969P6 601 aa1.22□□□□□ -2.21
SKA2-210ENST00000584089 VAT1Q99536 393 aa1.22□□□□□ -2.21
SKA2-210ENST00000584089 B9D2Q9BPU9 175 aa1.22□□□□□ -2.21
SKA2-210ENST00000584089 TXNDC17Q9BRA2 123 aa1.22□□□□□ -2.21
SKA2-210ENST00000584089 CHID1Q9BWS9 393 aa1.22□□□□□ -2.21
SKA2-210ENST00000584089 NXF2Q9GZY0 626 aaKnown RBP1.22□□□□□ -2.21
SKA2-210ENST00000584089 FBXO44Q9H4M3 255 aa1.22□□□□□ -2.21
SKA2-210ENST00000584089 NCOR1P1Q9H4R4 102 aa1.22□□□□□ -2.21
SKA2-210ENST00000584089 POMKQ9H5K3 350 aa1.22□□□□□ -2.21
SKA2-210ENST00000584089 CCL26Q9Y258 94 aa1.22□□□□□ -2.21
SKA2-210ENST00000584089 V9GYY9 64 aa1.22□□□□□ -2.21
SKA2-210ENST00000584089 GBF1Q92538 1859 aa1.22□□□□□ -2.21
SKA2-210ENST00000584089 ATRNO75882 1429 aa1.22□□□□□ -2.21
SKA2-210ENST00000584089 GOLGA6L7A0A1B0GV03 622 aa1.21□□□□□ -2.22
SKA2-210ENST00000584089 A0A1B0GXF2 115 aa1.21□□□□□ -2.22
SKA2-210ENST00000584089 RBFOX3A6NFN3 312 aa1.21□□□□□ -2.22
SKA2-210ENST00000584089 TVP23AA6NH52 213 aa1.21□□□□□ -2.22
SKA2-210ENST00000584089 PRMT5O14744 637 aaPredicted RBP1.21□□□□□ -2.22
SKA2-210ENST00000584089 MYO1DO94832 1006 aa1.21□□□□□ -2.22
SKA2-210ENST00000584089 SOX14O95416 240 aa1.21□□□□□ -2.22
SKA2-210ENST00000584089 SNAI1O95863 264 aaPredicted RBP1.21□□□□□ -2.22
SKA2-210ENST00000584089 CD8AP01732 235 aa1.21□□□□□ -2.22
SKA2-210ENST00000584089 GYPCP04921 128 aa1.21□□□□□ -2.22
SKA2-210ENST00000584089 MMDQ15546 238 aa1.21□□□□□ -2.22
SKA2-210ENST00000584089 TMEM176BQ3YBM2 270 aaPredicted RBP1.21□□□□□ -2.22
SKA2-210ENST00000584089 ACTBL2Q562R1 376 aa1.21□□□□□ -2.22
SKA2-210ENST00000584089 HSP90AA4PQ58FG1 418 aa1.21□□□□□ -2.22
SKA2-210ENST00000584089 C10orf91Q5T1B1 145 aa1.21□□□□□ -2.22
SKA2-210ENST00000584089 SCXQ7RTU7 201 aa1.21□□□□□ -2.22
SKA2-210ENST00000584089 NIT1Q86X76 327 aa1.21□□□□□ -2.22
SKA2-210ENST00000584089 TMEM25Q86YD3 366 aa1.21□□□□□ -2.22
SKA2-210ENST00000584089 FER1L6-AS1Q8NA97 138 aa1.21□□□□□ -2.22
SKA2-210ENST00000584089 MFSD8Q8NHS3 518 aa1.21□□□□□ -2.22
SKA2-210ENST00000584089 KIAA1143Q96AT1 154 aaPredicted RBP1.21□□□□□ -2.22
SKA2-210ENST00000584089 ADTRPQ96IZ2 230 aa1.21□□□□□ -2.22
SKA2-210ENST00000584089 ACOT13Q9NPJ3 140 aa1.21□□□□□ -2.22
SKA2-210ENST00000584089 DIABLOQ9NR28 239 aa1.21□□□□□ -2.22
SKA2-210ENST00000584089 VAPAQ9P0L0 249 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms