RNA–Protein interactions for RNA: ENST00000582486.5

GGA3-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5 BASIC

Gene GGA3, Length 2,319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-213ENST00000582486 ITPR1Q14643 2758 aa9.49□□□□□ -0.89
GGA3-213ENST00000582486 NXPH2O95156 264 aa9.49□□□□□ -0.89
GGA3-213ENST00000582486 SIX6O95475 246 aa9.49□□□□□ -0.89
GGA3-213ENST00000582486 ZNF250P15622 560 aa9.49□□□□□ -0.89
GGA3-213ENST00000582486 ZBTB25P24278 435 aa9.49□□□□□ -0.89
GGA3-213ENST00000582486 IL13RA1P78552 427 aa9.49□□□□□ -0.89
GGA3-213ENST00000582486 ESCO2Q56NI9 601 aa9.49□□□□□ -0.89
GGA3-213ENST00000582486 PRAMEF6Q5VXH4 476 aa9.49□□□□□ -0.89
GGA3-213ENST00000582486 Q8IYB0 196 aa9.49□□□□□ -0.89
GGA3-213ENST00000582486 C12orf45Q8N5I9 185 aaPredicted RBP9.49□□□□□ -0.89
GGA3-213ENST00000582486 OR2T35Q8NGX2 323 aa9.49□□□□□ -0.89
GGA3-213ENST00000582486 GTF3AQ92664 365 aaKnown RBP9.49□□□□□ -0.89
GGA3-213ENST00000582486 ARPC5LQ9BPX5 153 aa9.49□□□□□ -0.89
GGA3-213ENST00000582486 TMPRSS13Q9BYE2 586 aa9.49□□□□□ -0.89
GGA3-213ENST00000582486 WDR13Q9H1Z4 485 aa9.49□□□□□ -0.89
GGA3-213ENST00000582486 ZNF286AQ9HBT8 521 aa9.49□□□□□ -0.89
GGA3-213ENST00000582486 SPACA1Q9HBV2 294 aa9.49□□□□□ -0.89
GGA3-213ENST00000582486 NECAP2Q9NVZ3 263 aa9.49□□□□□ -0.89
GGA3-213ENST00000582486 PIPOXQ9P0Z9 390 aa9.49□□□□□ -0.89
GGA3-213ENST00000582486 HSPB11Q9Y547 144 aa9.49□□□□□ -0.89
GGA3-213ENST00000582486 PLCE1Q9P212 2302 aa9.49□□□□□ -0.89
GGA3-213ENST00000582486 C9orf170A2RU37 121 aa9.49□□□□□ -0.89
GGA3-213ENST00000582486 A6NLC8 198 aa9.49□□□□□ -0.89
GGA3-213ENST00000582486 GOSR2O14653 212 aa9.49□□□□□ -0.89
GGA3-213ENST00000582486 DEGS1O15121 323 aa9.49□□□□□ -0.89
GGA3-213ENST00000582486 NOS1APO75052 506 aaPredicted RBP9.49□□□□□ -0.89
GGA3-213ENST00000582486 ZNF44P15621 663 aa9.49□□□□□ -0.89
GGA3-213ENST00000582486 M6PRP20645 277 aa9.49□□□□□ -0.89
GGA3-213ENST00000582486 FPR2P25090 351 aa9.49□□□□□ -0.89
GGA3-213ENST00000582486 H2BFSP57053 126 aa9.49□□□□□ -0.89
GGA3-213ENST00000582486 SNRPD2P62316 118 aaKnown RBP9.49□□□□□ -0.89
GGA3-213ENST00000582486 HOXA4Q00056 320 aaPredicted RBP9.49□□□□□ -0.89
GGA3-213ENST00000582486 ZNF660Q6AZW8 331 aaPredicted RBP9.49□□□□□ -0.89
GGA3-213ENST00000582486 Q6P435 159 aa9.49□□□□□ -0.89
GGA3-213ENST00000582486 LYG2Q86SG7 212 aa9.49□□□□□ -0.89
GGA3-213ENST00000582486 PEG10Q86TG7 708 aaKnown RBP9.49□□□□□ -0.89
GGA3-213ENST00000582486 WFDC8Q8IUA0 241 aa9.49□□□□□ -0.89
GGA3-213ENST00000582486 SPERTQ8NA61 448 aa9.49□□□□□ -0.89
GGA3-213ENST00000582486 OR11H4Q8NGC9 324 aa9.49□□□□□ -0.89
GGA3-213ENST00000582486 TMEM171Q8WVE6 324 aa9.49□□□□□ -0.89
GGA3-213ENST00000582486 DHRS9Q9BPW9 319 aa9.49□□□□□ -0.89
GGA3-213ENST00000582486 USB1Q9BQ65 265 aaKnown RBP9.49□□□□□ -0.89
GGA3-213ENST00000582486 SYT3Q9BQG1 590 aa9.49□□□□□ -0.89
GGA3-213ENST00000582486 RTBDNQ9BSG5 229 aaPredicted RBP9.49□□□□□ -0.89
GGA3-213ENST00000582486 LIME1Q9H400 295 aa9.49□□□□□ -0.89
GGA3-213ENST00000582486 PRORYQ9H606 182 aa9.49□□□□□ -0.89
GGA3-213ENST00000582486 RANBP3Q9H6Z4 567 aaPredicted RBP9.49□□□□□ -0.89
GGA3-213ENST00000582486 UFSP2Q9NUQ7 469 aa9.49□□□□□ -0.89
GGA3-213ENST00000582486 SHANK1Q9Y566 2161 aa9.48□□□□□ -0.89
GGA3-213ENST00000582486 A0A1B0GWJ7 208 aa9.48□□□□□ -0.89
GGA3-213ENST00000582486 POM121CA8CG34 1229 aa9.48□□□□□ -0.89
GGA3-213ENST00000582486 SLC22A5O76082 557 aa9.48□□□□□ -0.89
GGA3-213ENST00000582486 OR2A4O95047 310 aa9.48□□□□□ -0.89
GGA3-213ENST00000582486 NAPSAO96009 420 aa9.48□□□□□ -0.89
GGA3-213ENST00000582486 IGHV3-13P01766 116 aa9.48□□□□□ -0.89
GGA3-213ENST00000582486 THBDP07204 575 aa9.48□□□□□ -0.89
GGA3-213ENST00000582486 GLRA1P23415 457 aa9.48□□□□□ -0.89
GGA3-213ENST00000582486 VAMP1P23763 118 aa9.48□□□□□ -0.89
GGA3-213ENST00000582486 RBMXP38159 391 aaKnown RBP9.48□□□□□ -0.89
GGA3-213ENST00000582486 CASP6P55212 293 aa9.48□□□□□ -0.89
GGA3-213ENST00000582486 KLF3P57682 345 aaPredicted RBP9.48□□□□□ -0.89
GGA3-213ENST00000582486 LY6DQ14210 128 aa9.48□□□□□ -0.89
GGA3-213ENST00000582486 FAHD2BQ6P2I3 314 aaPredicted RBP9.48□□□□□ -0.89
GGA3-213ENST00000582486 C5orf24Q7Z6I8 188 aa9.48□□□□□ -0.89
GGA3-213ENST00000582486 ST6GALNAC3Q8NDV1 305 aa9.48□□□□□ -0.89
GGA3-213ENST00000582486 OR2Z1Q8NG97 314 aa9.48□□□□□ -0.89
GGA3-213ENST00000582486 MARVELD3Q96A59 401 aa9.48□□□□□ -0.89
GGA3-213ENST00000582486 FAHD2AQ96GK7 314 aa9.48□□□□□ -0.89
GGA3-213ENST00000582486 SCGB3A2Q96PL1 93 aa9.48□□□□□ -0.89
GGA3-213ENST00000582486 OR2A7Q96R45 310 aa9.48□□□□□ -0.89
GGA3-213ENST00000582486 DPCDQ9BVM2 203 aaPredicted RBP9.48□□□□□ -0.89
GGA3-213ENST00000582486 ZSCAN5BA6NJL1 495 aa9.48□□□□□ -0.89
GGA3-213ENST00000582486 G3V3Q6 166 aa9.48□□□□□ -0.89
GGA3-213ENST00000582486 WNT9BO14905 357 aa9.48□□□□□ -0.89
GGA3-213ENST00000582486 SHOXO15266 292 aa9.48□□□□□ -0.89
GGA3-213ENST00000582486 GIPP09681 153 aaPredicted RBP9.48□□□□□ -0.89
GGA3-213ENST00000582486 CD34P28906 385 aa9.48□□□□□ -0.89
GGA3-213ENST00000582486 CA7P43166 264 aa9.48□□□□□ -0.89
GGA3-213ENST00000582486 AP2S1P53680 142 aaPredicted RBP9.48□□□□□ -0.89
GGA3-213ENST00000582486 TMEM128Q5BJH2 165 aa9.48□□□□□ -0.89
GGA3-213ENST00000582486 DCAF12L2Q5VW00 463 aa9.48□□□□□ -0.89
GGA3-213ENST00000582486 C11orf88Q6PI97 169 aa9.48□□□□□ -0.89
GGA3-213ENST00000582486 DHRS11Q6UWP2 260 aa9.48□□□□□ -0.89
GGA3-213ENST00000582486 TMEM108Q6UXF1 575 aa9.48□□□□□ -0.89
GGA3-213ENST00000582486 C9orf62Q8N4C0 152 aa9.48□□□□□ -0.89
GGA3-213ENST00000582486 POC1AQ8NBT0 407 aa9.48□□□□□ -0.89
GGA3-213ENST00000582486 TMEM185AQ8NFB2 350 aa9.48□□□□□ -0.89
GGA3-213ENST00000582486 CASTOR1Q8WTX7 329 aa9.48□□□□□ -0.89
GGA3-213ENST00000582486 TMEM230Q96A57 120 aa9.48□□□□□ -0.89
GGA3-213ENST00000582486 TLNRD1Q9H1K6 362 aa9.48□□□□□ -0.89
GGA3-213ENST00000582486 IFT22Q9H7X7 185 aa9.48□□□□□ -0.89
GGA3-213ENST00000582486 Q9N2K0 584 aa9.48□□□□□ -0.89
GGA3-213ENST00000582486 SLC23A1Q9UHI7 598 aa9.48□□□□□ -0.89
GGA3-213ENST00000582486 MGAT4AQ9UM21 535 aa9.48□□□□□ -0.89
GGA3-213ENST00000582486 LOC105371267A0A1B0GV96 52 aa9.47□□□□□ -0.89
GGA3-213ENST00000582486 LEUTXA8MZ59 168 aa9.47□□□□□ -0.89
GGA3-213ENST00000582486 SIRPB1O00241 398 aa9.47□□□□□ -0.89
GGA3-213ENST00000582486 ATXN7O15265 892 aaPredicted RBP9.47□□□□□ -0.89
GGA3-213ENST00000582486 OR2H2O95918 312 aa9.47□□□□□ -0.89
GGA3-213ENST00000582486 ACAA1P09110 424 aaPredicted RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms